RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 CA5AP35218 305 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 MRPL19P49406 292 aaKnown RBP17.49■□□□□ 0.39
SFXN1-208ENST00000507823 FPGSQ05932 587 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 PIGGQ5H8A4 983 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 TMEM25Q86YD3 366 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 HPS6Q86YV9 775 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 CPNE9Q8IYJ1 553 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 C3orf30Q96M34 536 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 SERPINI1Q99574 410 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 TTC1Q99614 292 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 NUSAP1Q9BXS6 441 aaKnown RBP17.49■□□□□ 0.39
SFXN1-208ENST00000507823 FIS1Q9Y3D6 152 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 GPR39O43194 453 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 PDE5AO76074 875 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 CLDN7O95471 211 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 POU2F2P09086 479 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 CHRM3P20309 590 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 ACRV1P26436 265 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 TEAD2Q15562 447 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 ZNF77Q15935 545 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 PLPP4Q5VZY2 271 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 TPRG1Q6ZUI0 275 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 TWIST2Q8WVJ9 160 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 ZNF641Q96N77 438 aaPredicted RBP17.49■□□□□ 0.39
SFXN1-208ENST00000507823 TLR9Q9NR96 1032 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 LATS2Q9NRM7 1088 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 NUDT4Q9NZJ9 180 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 ZMYM5Q9UJ78 669 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 WASF2Q9Y6W5 498 aa17.49■□□□□ 0.39
SFXN1-208ENST00000507823 ALPK3Q96L96 1907 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 A0A1W2PQ67 120 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 WASH3PC4AMC7 463 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 E5RI56 91 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 PSMD12O00232 456 aaPredicted RBP17.48■□□□□ 0.39
SFXN1-208ENST00000507823 SPAM1P38567 509 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 STK19P49842 368 aaPredicted RBP17.48■□□□□ 0.39
SFXN1-208ENST00000507823 ARHGAP15Q53QZ3 475 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 PRSS36Q5K4E3 855 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 PSRC1Q6PGN9 363 aaPredicted RBP17.48■□□□□ 0.39
SFXN1-208ENST00000507823 FAM151BQ6UXP7 276 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 MACC1Q6ZN28 852 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 BNC2Q6ZN30 1099 aaPredicted RBP17.48■□□□□ 0.39
SFXN1-208ENST00000507823 GPSM1Q86YR5 675 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 DTX3LQ8TDB6 740 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 TRPC4APQ8TEL6 797 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 POF1BQ8WVV4 589 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 HERVK_113Q902F9 699 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 TUBB1Q9H4B7 451 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 SUV39H2Q9H5I1 410 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 TDP1Q9NUW8 608 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 NMRK1Q9NWW6 199 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 MARK1Q9P0L2 795 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 GNPTGQ9UJJ9 305 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 MYOFQ9NZM1 2061 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 VPS4BO75351 444 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 SORBS2O94875 1100 aaKnown RBP17.48■□□□□ 0.39
SFXN1-208ENST00000507823 MLYCDO95822 493 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 RHOP08100 348 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 HNRNPA1P09651 372 aaKnown RBP eCLIP17.48■□□□□ 0.39
SFXN1-208ENST00000507823 ACADSP16219 412 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 CTNNB1P35222 781 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 FOXA1P55317 472 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 STX5Q13190 355 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 ZNF423Q2M1K9 1284 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 CRTC1Q6UUV9 634 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 BADQ92934 168 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 IRF7Q92985 503 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 CLPBQ9H078 707 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 ASB8Q9H765 288 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 AKTIPQ9H8T0 292 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 HECAQ9UBI9 543 aaPredicted RBP17.48■□□□□ 0.39
SFXN1-208ENST00000507823 RWDD3Q9Y3V2 267 aa17.48■□□□□ 0.39
SFXN1-208ENST00000507823 PLXNB3Q9ULL4 1909 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 GLYATL1P3A0A0U1RQE8 302 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 C5orf67F2Z3F1 127 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 NVLO15381 856 aaKnown RBP17.47■□□□□ 0.39
SFXN1-208ENST00000507823 PRR35P0CG20 571 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 CRY1Q16526 586 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 CARD16Q5EG05 197 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 HACD2Q6Y1H2 254 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 KBTBD6Q86V97 674 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 TTC16Q8NEE8 873 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 NAF1Q96HR8 494 aaKnown RBP17.47■□□□□ 0.39
SFXN1-208ENST00000507823 RSRC1Q96IZ7 334 aaKnown RBP17.47■□□□□ 0.39
SFXN1-208ENST00000507823 RPL10LQ96L21 214 aaKnown RBP17.47■□□□□ 0.39
SFXN1-208ENST00000507823 HTATIP2Q9BUP3 242 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 WDR41Q9HAD4 459 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 KLHL42Q9P2K6 505 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 TBC1D14Q9P2M4 693 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 ST14Q9Y5Y6 855 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 NPIPB15A6NHN6 443 aaPredicted RBP17.47■□□□□ 0.39
SFXN1-208ENST00000507823 GPC4O75487 556 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 RFPL2O75678 378 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 POP4O95707 220 aaKnown RBP17.47■□□□□ 0.39
SFXN1-208ENST00000507823 ESRRBO95718 433 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 ALDOCP09972 364 aaKnown RBP17.47■□□□□ 0.39
SFXN1-208ENST00000507823 PABPC1P11940 636 aaKnown RBP17.47■□□□□ 0.39
SFXN1-208ENST00000507823 ARSAP15289 507 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 ATP6V1C1P21283 382 aa17.47■□□□□ 0.39
SFXN1-208ENST00000507823 LRP8Q14114 963 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms