RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 ZNF677Q86XU0 584 aa13.69□□□□□ -0.22
DDR1-260ENST00000507533 ANKRD20A12PQ8NF67 263 aa13.69□□□□□ -0.22
DDR1-260ENST00000507533 NUDCD1Q96RS6 583 aa13.69□□□□□ -0.22
DDR1-260ENST00000507533 RIOK2Q9BVS4 552 aaKnown RBP13.69□□□□□ -0.22
DDR1-260ENST00000507533 HSD3B7Q9H2F3 369 aa13.69□□□□□ -0.22
DDR1-260ENST00000507533 NOD2Q9HC29 1040 aa13.69□□□□□ -0.22
DDR1-260ENST00000507533 GPR83Q9NYM4 423 aa13.69□□□□□ -0.22
DDR1-260ENST00000507533 VPS18Q9P253 973 aa13.69□□□□□ -0.22
DDR1-260ENST00000507533 LIMA1Q9UHB6 759 aaKnown RBP13.69□□□□□ -0.22
DDR1-260ENST00000507533 EEF2KO00418 725 aaKnown RBP13.68□□□□□ -0.22
DDR1-260ENST00000507533 DAPK3O43293 454 aa13.68□□□□□ -0.22
DDR1-260ENST00000507533 TMEM63AO94886 807 aa13.68□□□□□ -0.22
DDR1-260ENST00000507533 PGLSO95336 258 aa13.68□□□□□ -0.22
DDR1-260ENST00000507533 VIPP01282 170 aa13.68□□□□□ -0.22
DDR1-260ENST00000507533 TPM2P07951 284 aa13.68□□□□□ -0.22
DDR1-260ENST00000507533 XRCC1P18887 633 aaPredicted RBP13.68□□□□□ -0.22
DDR1-260ENST00000507533 ZNF143P52747 638 aaPredicted RBP13.68□□□□□ -0.22
DDR1-260ENST00000507533 PTSQ03393 145 aa13.68□□□□□ -0.22
DDR1-260ENST00000507533 PTP4A2Q12974 167 aa13.68□□□□□ -0.22
DDR1-260ENST00000507533 TUBB3Q13509 450 aa13.68□□□□□ -0.22
DDR1-260ENST00000507533 ZNF235Q14590 738 aa13.68□□□□□ -0.22
DDR1-260ENST00000507533 ARMC12Q5T9G4 340 aa13.68□□□□□ -0.22
DDR1-260ENST00000507533 PHYKPLQ8IUZ5 450 aa13.68□□□□□ -0.22
DDR1-260ENST00000507533 TRIM48Q8IWZ4 208 aa13.68□□□□□ -0.22
DDR1-260ENST00000507533 ADAMTS17Q8TE56 1095 aa13.68□□□□□ -0.22
DDR1-260ENST00000507533 ZDHHC12Q96GR4 267 aa13.68□□□□□ -0.22
DDR1-260ENST00000507533 FCRL4Q96PJ5 515 aa13.68□□□□□ -0.22
DDR1-260ENST00000507533 SMAD5Q99717 465 aaKnown RBP13.68□□□□□ -0.22
DDR1-260ENST00000507533 NAA15Q9BXJ9 866 aaKnown RBP13.68□□□□□ -0.22
DDR1-260ENST00000507533 VPS16Q9H269 839 aa13.68□□□□□ -0.22
DDR1-260ENST00000507533 RUBCNLQ9H714 662 aa13.68□□□□□ -0.22
DDR1-260ENST00000507533 RMI1Q9H9A7 625 aa13.68□□□□□ -0.22
DDR1-260ENST00000507533 GPATCH2LQ9NWQ4 482 aa13.68□□□□□ -0.22
DDR1-260ENST00000507533 ADAM22Q9P0K1 906 aa13.68□□□□□ -0.22
DDR1-260ENST00000507533 SCHIP1Q9P0W5 487 aaPredicted RBP13.68□□□□□ -0.22
DDR1-260ENST00000507533 NOCTQ9UK39 431 aaKnown RBP13.68□□□□□ -0.22
DDR1-260ENST00000507533 PPIL1Q9Y3C6 166 aa13.68□□□□□ -0.22
DDR1-260ENST00000507533 CSMD2Q7Z408 3487 aa13.67□□□□□ -0.22
DDR1-260ENST00000507533 LRRC10BA6NIK2 292 aa13.67□□□□□ -0.22
DDR1-260ENST00000507533 SIGLEC16A6NMB1 481 aa13.67□□□□□ -0.22
DDR1-260ENST00000507533 PES1O00541 588 aaKnown RBP13.67□□□□□ -0.22
DDR1-260ENST00000507533 LRRTM2O43300 516 aa13.67□□□□□ -0.22
DDR1-260ENST00000507533 FOLR1P15328 257 aa13.67□□□□□ -0.22
DDR1-260ENST00000507533 CHRNB2P17787 502 aa13.67□□□□□ -0.22
DDR1-260ENST00000507533 SLC19A1P41440 591 aa13.67□□□□□ -0.22
DDR1-260ENST00000507533 PER3P56645 1201 aa13.67□□□□□ -0.22
DDR1-260ENST00000507533 FMO1Q01740 532 aa13.67□□□□□ -0.22
DDR1-260ENST00000507533 CDR2Q01850 454 aa13.67□□□□□ -0.22
DDR1-260ENST00000507533 RAPSNQ13702 412 aa13.67□□□□□ -0.22
DDR1-260ENST00000507533 ZRSR2Q15696 482 aaKnown RBP13.67□□□□□ -0.22
DDR1-260ENST00000507533 ZXDCQ2QGD7 858 aaPredicted RBP13.67□□□□□ -0.22
DDR1-260ENST00000507533 IRGCQ6NXR0 463 aa13.67□□□□□ -0.22
DDR1-260ENST00000507533 PGBD5Q8N414 524 aa13.67□□□□□ -0.22
DDR1-260ENST00000507533 GLIS1Q8NBF1 620 aa13.67□□□□□ -0.22
DDR1-260ENST00000507533 SIDT2Q8NBJ9 832 aaKnown RBP13.67□□□□□ -0.22
DDR1-260ENST00000507533 RSC1A1Q92681 617 aa13.67□□□□□ -0.22
DDR1-260ENST00000507533 MR1Q95460 341 aa13.67□□□□□ -0.22
DDR1-260ENST00000507533 ZNF599Q96NL3 588 aa13.67□□□□□ -0.22
DDR1-260ENST00000507533 SMIM14Q96QK8 99 aa13.67□□□□□ -0.22
DDR1-260ENST00000507533 STK33Q9BYT3 514 aa13.67□□□□□ -0.22
DDR1-260ENST00000507533 CBX8Q9HC52 389 aa13.67□□□□□ -0.22
DDR1-260ENST00000507533 CNOT6Q9ULM6 557 aaKnown RBP13.67□□□□□ -0.22
DDR1-260ENST00000507533 B3GNT3Q9Y2A9 372 aa13.67□□□□□ -0.22
DDR1-260ENST00000507533 COPG1Q9Y678 874 aaKnown RBP13.67□□□□□ -0.22
DDR1-260ENST00000507533 HIVEP1P15822 2718 aa13.66□□□□□ -0.22
DDR1-260ENST00000507533 ANKRD62A6NC57 917 aa13.66□□□□□ -0.22
DDR1-260ENST00000507533 F5H423 210 aaPredicted RBP13.66□□□□□ -0.22
DDR1-260ENST00000507533 F8VZ95 297 aa13.66□□□□□ -0.22
DDR1-260ENST00000507533 GRID2O43424 1007 aa13.66□□□□□ -0.22
DDR1-260ENST00000507533 ATP1A3P13637 1013 aa13.66□□□□□ -0.22
DDR1-260ENST00000507533 UCHL3P15374 230 aa13.66□□□□□ -0.22
DDR1-260ENST00000507533 ERCC2P18074 760 aa13.66□□□□□ -0.22
DDR1-260ENST00000507533 HSPA9P38646 679 aaKnown RBP13.66□□□□□ -0.22
DDR1-260ENST00000507533 CAPZBP47756 277 aa13.66□□□□□ -0.22
DDR1-260ENST00000507533 GSCP56915 257 aaPredicted RBP13.66□□□□□ -0.22
DDR1-260ENST00000507533 KCNAB1Q14722 419 aa13.66□□□□□ -0.22
DDR1-260ENST00000507533 MED25Q71SY5 747 aa13.66□□□□□ -0.22
DDR1-260ENST00000507533 BPHLQ86WA6 291 aaPredicted RBP13.66□□□□□ -0.22
DDR1-260ENST00000507533 NDUFAF2Q8N183 169 aa13.66□□□□□ -0.22
DDR1-260ENST00000507533 ARFGAP1Q8N6T3 406 aa13.66□□□□□ -0.22
DDR1-260ENST00000507533 NPWQ8N729 165 aa13.66□□□□□ -0.22
DDR1-260ENST00000507533 C3orf20Q8ND61 904 aa13.66□□□□□ -0.22
DDR1-260ENST00000507533 PIH1D2Q8WWB5 315 aa13.66□□□□□ -0.22
DDR1-260ENST00000507533 CNPY3Q9BT09 278 aa13.66□□□□□ -0.22
DDR1-260ENST00000507533 OSGEPL1Q9H4B0 414 aa13.66□□□□□ -0.22
DDR1-260ENST00000507533 DHX35Q9H5Z1 703 aaKnown RBP13.66□□□□□ -0.22
DDR1-260ENST00000507533 WASH6PQ9NQA3 447 aa13.66□□□□□ -0.22
DDR1-260ENST00000507533 KLC4Q9NSK0 619 aa13.66□□□□□ -0.22
DDR1-260ENST00000507533 C5AR2Q9P296 337 aa13.66□□□□□ -0.22
DDR1-260ENST00000507533 ZNF624Q9P2J8 865 aaPredicted RBP13.66□□□□□ -0.22
DDR1-260ENST00000507533 SNX7Q9UNH6 387 aa13.66□□□□□ -0.22
DDR1-260ENST00000507533 AP4E1Q9UPM8 1137 aa13.66□□□□□ -0.22
DDR1-260ENST00000507533 IGHV5-51A0A0C4DH38 117 aa13.65□□□□□ -0.22
DDR1-260ENST00000507533 PRSS44E7EML9 344 aa13.65□□□□□ -0.22
DDR1-260ENST00000507533 NUAK1O60285 661 aa13.65□□□□□ -0.22
DDR1-260ENST00000507533 CPNE3O75131 537 aaKnown RBP13.65□□□□□ -0.22
DDR1-260ENST00000507533 GFPT2O94808 682 aa13.65□□□□□ -0.22
DDR1-260ENST00000507533 PDHA1P08559 390 aa13.65□□□□□ -0.22
DDR1-260ENST00000507533 UNGP13051 313 aaPredicted RBP13.65□□□□□ -0.22
DDR1-260ENST00000507533 ZNF30P17039 623 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms