RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 DYNLT1P63172 113 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 XRCC4Q13426 336 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 GTF2H3Q13889 308 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 PPP2R5EQ16537 467 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 PCSK7Q16549 785 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 C11orf63Q6NUN7 778 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 CYB5D1Q6P9G0 228 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 WASH2PQ6VEQ5 465 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 SPOCD1Q6ZMY3 1216 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 RNF214Q8ND24 703 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 GPR26Q8NDV2 337 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 PPP1R2P1Q96PQ5 205 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 FCRL5Q96RD9 977 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 ARHGAP9Q9BRR9 750 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 TRIM5Q9C035 493 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 TRIT1Q9H3H1 467 aaKnown RBP14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 WASH6PQ9NQA3 447 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 POT1Q9NUX5 634 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 SLC39A1Q9NY26 324 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 FOXJ2Q9P0K8 574 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 KLHL8Q9P2G9 620 aaPredicted RBP14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 CPNE7Q9UBL6 633 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 TBC1D29Q9UFV1 150 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 SHOC2Q9UQ13 582 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 KCNK6Q9Y257 313 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 EFR3BQ9Y2G0 817 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 ADGRG1Q9Y653 693 aa14.25□□□□□ -0.13
HMGCS1-203ENST00000507004 LOC285095A0A1B0GVY8 99 aa14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 KLHL33A6NCF5 533 aa14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 TOX3O15405 576 aaPredicted RBP14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 PMPCBO75439 489 aa14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 CDK14O94921 469 aa14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 VIPP01282 170 aa14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 PRB1P04280 392 aa14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 FGF3P11487 239 aaPredicted RBP14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 CCL4P13236 92 aa14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 TNNT1P13805 278 aa14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 ZNF8P17098 575 aaPredicted RBP14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 XRCC1P18887 633 aaPredicted RBP14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 CSF2RBP32927 897 aa14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 MPP3Q13368 585 aa14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 INSCQ1MX18 579 aa14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 NKAIN2Q5VXU1 208 aa14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 ALS2CLQ60I27 953 aa14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 NPNTQ6UXI9 565 aa14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 CEACAM20Q6UY09 585 aa14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 ARHGAP22Q7Z5H3 698 aa14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 ZFAND4Q86XD8 727 aa14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 TRIM48Q8IWZ4 208 aa14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 RCBTB1Q8NDN9 531 aa14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 LRRN4Q8WUT4 740 aa14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 LRRC45Q96CN5 670 aa14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 TTC25Q96NG3 672 aa14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 CEP41Q9BYV8 373 aa14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 OR2AG1Q9H205 316 aa14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 FBXO8Q9NRD0 319 aa14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 DNMT3AQ9Y6K1 912 aaPredicted RBP14.24□□□□□ -0.13
HMGCS1-203ENST00000507004 NBEAQ8NFP9 2946 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 B8ZZF3 427 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 SNX2O60749 519 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 MT-CYBP00156 380 aaPredicted RBP14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 ANKRD34CP0C6C1 535 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 ZNF7P17097 686 aaPredicted RBP14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 BPIP17213 487 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 IDSP22304 550 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 WNT3AP56704 352 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 UBE2IP63279 158 aaKnown RBP14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 MC2RQ01718 297 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 ITGA9Q13797 1035 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 TGIF1Q15583 401 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 LDLRAP1Q5SW96 308 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 AGAP9Q5VTM2 703 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 KIAA1614Q5VZ46 1190 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 KAZNQ674X7 775 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 ITPRIPL1Q6GPH6 555 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 ABRAXAS1Q6UWZ7 409 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 PID1Q7Z2X4 250 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 KDELC2Q7Z4H8 507 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 ADGRG6Q86SQ4 1221 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 FAM129CQ86XR2 697 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 CCDC50Q8IVM0 306 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 IL22RA1Q8N6P7 574 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 SPATA22Q8NHS9 363 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 HTR3CQ8WXA8 447 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 NCSTNQ92542 709 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 ART4Q93070 314 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 EID2BQ96D98 161 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 ZNF514Q96K75 400 aaPredicted RBP14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 OSGEPL1Q9H4B0 414 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 KLC4Q9NSK0 619 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 PKP3Q9Y446 797 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 PRKAB1Q9Y478 270 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 PCDHGA4Q9Y5G9 962 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 PCDHA13Q9Y5I0 950 aa14.23□□□□□ -0.13
HMGCS1-203ENST00000507004 MN1Q10571 1320 aaPredicted RBP14.22□□□□□ -0.13
HMGCS1-203ENST00000507004 TRBV23OR9-2A0A075B6M9 112 aa14.22□□□□□ -0.13
HMGCS1-203ENST00000507004 hCG_1818297A0A087WSY0 165 aa14.22□□□□□ -0.13
HMGCS1-203ENST00000507004 EFCAB7A8K855 629 aa14.22□□□□□ -0.13
HMGCS1-203ENST00000507004 PDZK1P1A8MUH7 402 aa14.22□□□□□ -0.13
HMGCS1-203ENST00000507004 APOC4-APOC2K7ER74 178 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms