RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 KCNH5Q8NCM2 988 aa2.81□□□□□ -1.96
GYPB-207ENST00000506679 OR8K5Q8NH50 307 aa2.81□□□□□ -1.96
GYPB-207ENST00000506679 BBS10Q8TAM1 723 aa2.81□□□□□ -1.96
GYPB-207ENST00000506679 SLC38A5Q8WUX1 472 aa2.81□□□□□ -1.96
GYPB-207ENST00000506679 SLC44A1Q8WWI5 657 aa2.81□□□□□ -1.96
GYPB-207ENST00000506679 NSUN4Q96CB9 384 aaKnown RBP2.81□□□□□ -1.96
GYPB-207ENST00000506679 CDCA5Q96FF9 252 aa2.81□□□□□ -1.96
GYPB-207ENST00000506679 GFI1Q99684 422 aa2.81□□□□□ -1.96
GYPB-207ENST00000506679 SYT17Q9BSW7 474 aa2.81□□□□□ -1.96
GYPB-207ENST00000506679 TMEM39BQ9GZU3 492 aa2.81□□□□□ -1.96
GYPB-207ENST00000506679 GHITMQ9H3K2 345 aa2.81□□□□□ -1.96
GYPB-207ENST00000506679 PLK3Q9H4B4 646 aa2.81□□□□□ -1.96
GYPB-207ENST00000506679 RETREG1Q9H6L5 497 aa2.81□□□□□ -1.96
GYPB-207ENST00000506679 LRRC4Q9HBW1 653 aa2.81□□□□□ -1.96
GYPB-207ENST00000506679 PLSCR4Q9NRQ2 329 aa2.81□□□□□ -1.96
GYPB-207ENST00000506679 OGFRQ9NZT2 677 aa2.81□□□□□ -1.96
GYPB-207ENST00000506679 RALYQ9UKM9 306 aaKnown RBP2.81□□□□□ -1.96
GYPB-207ENST00000506679 R3HDM2Q9Y2K5 976 aaKnown RBP2.81□□□□□ -1.96
GYPB-207ENST00000506679 KLHL20Q9Y2M5 609 aa2.81□□□□□ -1.96
GYPB-207ENST00000506679 ZNF711Q9Y462 761 aa2.81□□□□□ -1.96
GYPB-207ENST00000506679 LAS1LQ9Y4W2 734 aaKnown RBP2.81□□□□□ -1.96
GYPB-207ENST00000506679 TCF20Q9UGU0 1960 aaKnown RBP2.8□□□□□ -1.96
GYPB-207ENST00000506679 FSD2A1L4K1 749 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 TMEM8BA6NDV4 472 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 C5orf60A6NFR6 353 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 BMPR1BO00238 502 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 VILLO15195 856 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 BUB3O43684 328 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 HS6ST1O60243 411 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 KCNK5O95279 499 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 RB1P06400 928 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 FAM106CPP0CH98 169 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 MMP14P50281 582 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 ISL1P61371 349 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 PITX1P78337 314 aaPredicted RBP2.8□□□□□ -1.96
GYPB-207ENST00000506679 CDC16Q13042 620 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 IKQ13123 557 aaPredicted RBP2.8□□□□□ -1.96
GYPB-207ENST00000506679 ACVR2BQ13705 512 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 PDE1CQ14123 709 aaPredicted RBP2.8□□□□□ -1.96
GYPB-207ENST00000506679 PLEKHS1Q5SXH7 462 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 TMEM198Q66K66 360 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 GPR180Q86V85 440 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 EXOC3L1Q86VI1 746 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 TMPRSS12Q86WS5 348 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 RPAP2Q8IXW5 612 aaPredicted RBP2.8□□□□□ -1.96
GYPB-207ENST00000506679 PM20D2Q8IYS1 436 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 RASGEF1CQ8N431 466 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 GCSAMQ8N6F7 178 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 KBTBD3Q8NAB2 608 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 POC1AQ8NBT0 407 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 DNAAF4Q8WXU2 420 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 FAM120BQ96EK7 910 aaKnown RBP2.8□□□□□ -1.96
GYPB-207ENST00000506679 CCDC34Q96HJ3 373 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 DACH2Q96NX9 599 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 BARD1Q99728 777 aaKnown RBP2.8□□□□□ -1.96
GYPB-207ENST00000506679 NCAPGQ9BPX3 1015 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 NEURL2Q9BR09 285 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 SRSF8Q9BRL6 282 aaKnown RBP2.8□□□□□ -1.96
GYPB-207ENST00000506679 C1QTNF1Q9BXJ1 281 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 KRTAP2-2Q9BYT5 123 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 SYNCQ9H7C4 482 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 PAG1Q9NWQ8 432 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 DONSONQ9NYP3 566 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 PNMA2Q9UL42 364 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 NENFQ9UMX5 172 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 EXO1Q9UQ84 846 aaKnown RBP2.8□□□□□ -1.96
GYPB-207ENST00000506679 CMAHPQ9Y471 501 aa2.8□□□□□ -1.96
GYPB-207ENST00000506679 GREB1LQ9C091 1923 aaPredicted RBP2.8□□□□□ -1.96
GYPB-207ENST00000506679 ANKRD18BA2A2Z9 1011 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 A6NCN8 305 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 OR5K3A6NET4 321 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 IFITM10A6NMD0 228 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 PTGES3LE9PB15 166 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 AP3D1O14617 1153 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 PAPSS1O43252 624 aaPredicted RBP2.79□□□□□ -1.96
GYPB-207ENST00000506679 ZNHIT1O43257 154 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 PLPP2O43688 288 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 WDR1O75083 606 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 ZNF217O75362 1048 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 TPPPO94811 219 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 AMD1P17707 334 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 GM2AP17900 193 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 POLR2CP19387 275 aaPredicted RBP2.79□□□□□ -1.96
GYPB-207ENST00000506679 KCNA5P22460 613 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 HRH2P25021 359 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 CASP2P42575 452 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 MSH2P43246 934 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 NAP1L1P55209 391 aaKnown RBP2.79□□□□□ -1.96
GYPB-207ENST00000506679 EEF1A1P68104 462 aaKnown RBP2.79□□□□□ -1.96
GYPB-207ENST00000506679 CREB5Q02930 508 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 ARL16Q0P5N6 197 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 GTF2H2Q13888 395 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 RALBP1Q15311 655 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 RAB41Q5JT25 222 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 STXBP5Q5T5C0 1151 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 EEF1A1P5Q5VTE0 462 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 SPATA1Q5VX52 437 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 FAM109BQ6ICB4 259 aaPredicted RBP2.79□□□□□ -1.96
GYPB-207ENST00000506679 GTF2H2CQ6P1K8 395 aa2.79□□□□□ -1.96
GYPB-207ENST00000506679 RAD9BQ6WBX8 426 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms