RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 TTC24A2A3L6 582 aaPredicted RBP3.26□□□□□ -1.89
TCOF1-208ENST00000506063 CFAP69A5D8W1 941 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 IDSB3KWA1 339 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 H3BMH7 237 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 INSIG1O15503 277 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 TEX33O43247 280 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 TLX2O43763 284 aaPredicted RBP3.26□□□□□ -1.89
TCOF1-208ENST00000506063 CD5LO43866 347 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 RASSF9O75901 435 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 RASAL1O95294 804 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 POP4O95707 220 aaKnown RBP3.26□□□□□ -1.89
TCOF1-208ENST00000506063 TRUB2O95900 331 aaKnown RBP3.26□□□□□ -1.89
TCOF1-208ENST00000506063 IGHEP01854 428 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 APOEP02649 317 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 KLK3P07288 261 aaPredicted RBP3.26□□□□□ -1.89
TCOF1-208ENST00000506063 RHOCP08134 193 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 F3P13726 295 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 LCP1P13796 627 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 IDSP22304 550 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 RPL34P49207 117 aaKnown RBP3.26□□□□□ -1.89
TCOF1-208ENST00000506063 TUBB4BP68371 445 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 GUCY1B3Q02153 619 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 ACY1Q03154 408 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 SLC20A2Q08357 652 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 ELP6Q0PNE2 266 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 BST2Q10589 180 aaKnown RBP3.26□□□□□ -1.89
TCOF1-208ENST00000506063 BIRC3Q13489 604 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 TUBB2AQ13885 445 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 ANKRD1Q15327 319 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 SGSM1Q2NKQ1 1148 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 GOLGA7BQ2TAP0 167 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 MIDNQ504T8 468 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 RABGAP1LQ5R372 815 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 AFMIDQ63HM1 303 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 MRPL14Q6P1L8 145 aaKnown RBP3.26□□□□□ -1.89
TCOF1-208ENST00000506063 KIRREL2Q6UWL6 708 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 DTHD1Q6ZMT9 781 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 CEP128Q6ZU80 1094 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 BEND5Q7L4P6 421 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 EPM2AIP1Q7L775 607 aaPredicted RBP3.26□□□□□ -1.89
TCOF1-208ENST00000506063 SETD3Q86TU7 594 aaPredicted RBP3.26□□□□□ -1.89
TCOF1-208ENST00000506063 TMEM126BQ8IUX1 230 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 LIX1LQ8IVB5 337 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 P3H2Q8IVL5 708 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 SYCP3Q8IZU3 236 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 CLYBLQ8N0X4 340 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 SHISA5Q8N114 240 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 SIX6OS1Q8N1H7 587 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 TAB3Q8N5C8 712 aaPredicted RBP3.26□□□□□ -1.89
TCOF1-208ENST00000506063 PPM1NQ8N819 430 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 SIDT2Q8NBJ9 832 aaKnown RBP3.26□□□□□ -1.89
TCOF1-208ENST00000506063 NETO2Q8NC67 525 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 OR2Y1Q8NGV0 311 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 UBA3Q8TBC4 463 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 FNIP1Q8TF40 1166 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 IGFBPL1Q8WX77 278 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 SEC16BQ96JE7 1060 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 COQ10AQ96MF6 247 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 PCMTD1Q96MG8 357 aaPredicted RBP3.26□□□□□ -1.89
TCOF1-208ENST00000506063 PLEKHG4BQ96PX9 1271 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 MAP3K3Q99759 626 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 ZSWIM1Q9BR11 485 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 DHRS4Q9BTZ2 278 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 TUBB2BQ9BVA1 445 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 AMBRA1Q9C0C7 1298 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 LHPPQ9H008 270 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 GDPD2Q9HCC8 539 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 KIAA1586Q9HCI6 787 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 AGPAT3Q9NRZ7 376 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 KCND1Q9NSA2 647 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 FAM13BQ9NYF5 915 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 SCHIP1Q9P0W5 487 aaPredicted RBP3.26□□□□□ -1.89
TCOF1-208ENST00000506063 ZNF624Q9P2J8 865 aaPredicted RBP3.26□□□□□ -1.89
TCOF1-208ENST00000506063 CDC42EP3Q9UKI2 254 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 TSPAN16Q9UKR8 245 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 ATP8A1Q9Y2Q0 1164 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 MFHAS1Q9Y4C4 1052 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.26□□□□□ -1.89
TCOF1-208ENST00000506063 SNX10Q9Y5X0 201 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 HS3ST3B1Q9Y662 390 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 ALPK2Q86TB3 2170 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 HERC2O95714 4834 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 SACSQ9NZJ4 4579 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 PRR14LQ5THK1 2151 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 IGLV3-10A0A075B6K4 115 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 KIR2DS5A0A0G2JLQ3 304 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 A0A0G2JNG1 304 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 LOC100653049A0A140TA62 436 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 ILVBLA1L0T0 632 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 ASPDHA6ND91 283 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 KIR2DS3K7RE56 304 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 PDE2AO00408 941 aaPredicted RBP3.25□□□□□ -1.89
TCOF1-208ENST00000506063 PEX12O00623 359 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 MAPK13O15264 365 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 ASNA1O43681 348 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 PMPCBO75439 489 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 PAGE1O75459 146 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 KRT34O76011 436 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 PIGNO95427 931 aa3.25□□□□□ -1.89
TCOF1-208ENST00000506063 ADCY5O95622 1261 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms