RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 FOXK1P85037 733 aa20.76■□□□□ 0.91
SQSTM1-210ENST00000506042 MMRN1Q13201 1228 aa20.76■□□□□ 0.91
SQSTM1-210ENST00000506042 ALKBH5Q6P6C2 394 aaKnown RBP20.76■□□□□ 0.91
SQSTM1-210ENST00000506042 RFLNAQ6ZTI6 216 aa20.76■□□□□ 0.91
SQSTM1-210ENST00000506042 TMEM26Q6ZUK4 368 aa20.76■□□□□ 0.91
SQSTM1-210ENST00000506042 TRAM1L1Q8N609 369 aa20.76■□□□□ 0.91
SQSTM1-210ENST00000506042 PDE7BQ9NP56 450 aa20.76■□□□□ 0.91
SQSTM1-210ENST00000506042 ZNF71Q9NQZ8 489 aaPredicted RBP20.76■□□□□ 0.91
SQSTM1-210ENST00000506042 ANKMY1Q9P2S6 941 aa20.76■□□□□ 0.91
SQSTM1-210ENST00000506042 PPP1R12AO14974 1030 aaPredicted RBP20.75■□□□□ 0.91
SQSTM1-210ENST00000506042 KCNJ13O60928 360 aa20.75■□□□□ 0.91
SQSTM1-210ENST00000506042 HLA-DQB2P05538 268 aa20.75■□□□□ 0.91
SQSTM1-210ENST00000506042 ZFXP17010 805 aaPredicted RBP20.75■□□□□ 0.91
SQSTM1-210ENST00000506042 IDSP22304 550 aa20.75■□□□□ 0.91
SQSTM1-210ENST00000506042 ZBED6P86452 979 aa20.75■□□□□ 0.91
SQSTM1-210ENST00000506042 PTPRRQ15256 657 aa20.75■□□□□ 0.91
SQSTM1-210ENST00000506042 ABHD17AQ96GS6 310 aa20.75■□□□□ 0.91
SQSTM1-210ENST00000506042 TIMM29Q9BSF4 260 aa20.75■□□□□ 0.91
SQSTM1-210ENST00000506042 SPRY4Q9C004 299 aa20.75■□□□□ 0.91
SQSTM1-210ENST00000506042 OR2AG1Q9H205 316 aa20.75■□□□□ 0.91
SQSTM1-210ENST00000506042 MAGEE1Q9HCI5 957 aa20.75■□□□□ 0.91
SQSTM1-210ENST00000506042 NFKBIL1Q9UBC1 381 aaPredicted RBP20.75■□□□□ 0.91
SQSTM1-210ENST00000506042 LUC7L2Q9Y383 392 aaKnown RBP20.75■□□□□ 0.91
SQSTM1-210ENST00000506042 OAS3Q9Y6K5 1087 aaKnown RBP20.75■□□□□ 0.91
SQSTM1-210ENST00000506042 A6NCN8 305 aa20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 PRR19A6NJB7 356 aa20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 DLGAP3O95886 979 aa20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 RECKO95980 971 aa20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 C9P02748 559 aa20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 H2AFZP0C0S5 128 aa20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 ARL4DP49703 201 aa20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 PDE1BQ01064 536 aa20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 QPCTQ16769 361 aa20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 ZDHHC20Q5W0Z9 365 aa20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 TXNRD3NBQ6F5E7 133 aa20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 H2AFVQ71UI9 128 aa20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 BPHLQ86WA6 291 aaPredicted RBP20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 PPP1R3BQ86XI6 285 aa20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 UNC5BQ8IZJ1 945 aa20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 ARRDC2Q8TBH0 407 aa20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 BRSK1Q8TDC3 778 aa20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 GLYATL1Q969I3 302 aa20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 BTBD6Q96KE9 485 aa20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 TGM7Q96PF1 710 aa20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 OR6C1Q96RD1 312 aa20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 TBC1D10AQ9BXI6 508 aa20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 BRD8Q9H0E9 1235 aa20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 ZNF768Q9H5H4 540 aaKnown RBP20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 CBX8Q9HC52 389 aa20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 PRDM8Q9NQV8 689 aa20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 ATXN10Q9UBB4 475 aa20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 G3BP2Q9UN86 482 aaKnown RBP20.74■□□□□ 0.91
SQSTM1-210ENST00000506042 A0A0U1RQS6 177 aa20.73■□□□□ 0.91
SQSTM1-210ENST00000506042 FADS2P1A8MWK0 482 aa20.73■□□□□ 0.91
SQSTM1-210ENST00000506042 RFPL1O75677 317 aa20.73■□□□□ 0.91
SQSTM1-210ENST00000506042 PROSCO94903 275 aa20.73■□□□□ 0.91
SQSTM1-210ENST00000506042 NDUFA10O95299 355 aa20.73■□□□□ 0.91
SQSTM1-210ENST00000506042 EML2O95834 649 aa20.73■□□□□ 0.91
SQSTM1-210ENST00000506042 JCHAINP01591 159 aa20.73■□□□□ 0.91
SQSTM1-210ENST00000506042 ZNF7P17097 686 aaPredicted RBP20.73■□□□□ 0.91
SQSTM1-210ENST00000506042 IL4RP24394 825 aa20.73■□□□□ 0.91
SQSTM1-210ENST00000506042 OAS2P29728 719 aaKnown RBP20.73■□□□□ 0.91
SQSTM1-210ENST00000506042 CASP14P31944 242 aa20.73■□□□□ 0.91
SQSTM1-210ENST00000506042 PDK1Q15118 436 aa20.73■□□□□ 0.91
SQSTM1-210ENST00000506042 E4F1Q66K89 784 aaPredicted RBP20.73■□□□□ 0.91
SQSTM1-210ENST00000506042 BZW1Q7L1Q6 419 aaKnown RBP20.73■□□□□ 0.91
SQSTM1-210ENST00000506042 NT5DC3Q86UY8 548 aa20.73■□□□□ 0.91
SQSTM1-210ENST00000506042 EFCAB3Q8N7B9 438 aa20.73■□□□□ 0.91
SQSTM1-210ENST00000506042 GDAP1Q8TB36 358 aa20.73■□□□□ 0.91
SQSTM1-210ENST00000506042 PLEKHG4BQ96PX9 1271 aa20.73■□□□□ 0.91
SQSTM1-210ENST00000506042 APMAPQ9HDC9 416 aa20.73■□□□□ 0.91
SQSTM1-210ENST00000506042 LNPEPQ9UIQ6 1025 aa20.73■□□□□ 0.91
SQSTM1-210ENST00000506042 PADI1Q9ULC6 663 aa20.73■□□□□ 0.91
SQSTM1-210ENST00000506042 CNOT6Q9ULM6 557 aaKnown RBP20.73■□□□□ 0.91
SQSTM1-210ENST00000506042 GOLGA6L19H0YKK7 550 aa20.72■□□□□ 0.91
SQSTM1-210ENST00000506042 KATNA1O75449 491 aa20.72■□□□□ 0.91
SQSTM1-210ENST00000506042 CDK14O94921 469 aa20.72■□□□□ 0.91
SQSTM1-210ENST00000506042 PRLP01236 227 aa20.72■□□□□ 0.91
SQSTM1-210ENST00000506042 SLC4A1P02730 911 aa20.72■□□□□ 0.91
SQSTM1-210ENST00000506042 CD48P09326 243 aa20.72■□□□□ 0.91
SQSTM1-210ENST00000506042 GP1BBP13224 206 aa20.72■□□□□ 0.91
SQSTM1-210ENST00000506042 ZNF8P17098 575 aaPredicted RBP20.72■□□□□ 0.91
SQSTM1-210ENST00000506042 UBE2IP63279 158 aaKnown RBP20.72■□□□□ 0.91
SQSTM1-210ENST00000506042 IFI35P80217 286 aaPredicted RBP20.72■□□□□ 0.91
SQSTM1-210ENST00000506042 PPIDQ08752 370 aaKnown RBP20.72■□□□□ 0.91
SQSTM1-210ENST00000506042 AP1B1Q10567 949 aa20.72■□□□□ 0.91
SQSTM1-210ENST00000506042 NR1I3Q14994 352 aa20.72■□□□□ 0.91
SQSTM1-210ENST00000506042 SLC14A2Q15849 920 aa20.72■□□□□ 0.91
SQSTM1-210ENST00000506042 CACHD1Q5VU97 1274 aa20.72■□□□□ 0.91
SQSTM1-210ENST00000506042 ALS2CLQ60I27 953 aa20.72■□□□□ 0.91
SQSTM1-210ENST00000506042 TCTN3Q6NUS6 607 aa20.72■□□□□ 0.91
SQSTM1-210ENST00000506042 CRTC3Q6UUV7 619 aa20.72■□□□□ 0.91
SQSTM1-210ENST00000506042 TIPARPQ7Z3E1 657 aaKnown RBP20.72■□□□□ 0.91
SQSTM1-210ENST00000506042 PRSS42Q7Z5A4 293 aa20.72■□□□□ 0.91
SQSTM1-210ENST00000506042 FAM26EQ8N5C1 309 aa20.72■□□□□ 0.91
SQSTM1-210ENST00000506042 FCRL4Q96PJ5 515 aa20.72■□□□□ 0.91
SQSTM1-210ENST00000506042 SIDT1Q9NXL6 827 aaKnown RBP20.72■□□□□ 0.91
SQSTM1-210ENST00000506042 ZNF487B1APH4 448 aa20.71■□□□□ 0.91
SQSTM1-210ENST00000506042 C21orf140B9A014 251 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms