RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 STAMBPO95630 424 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 FASTKQ14296 549 aaKnown RBP11.23□□□□□ -0.61
NFKB1-205ENST00000505458 PCBP2Q15366 365 aaKnown RBP eCLIP11.23□□□□□ -0.614e-6■■■□□ 18.9
NFKB1-205ENST00000505458 TAF11Q15544 211 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 LRRC74BQ6ZQY2 392 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 SERPINA9Q86WD7 417 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 PIANPQ8IYJ0 282 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 WFDC5Q8TCV5 224 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 TM6SF2Q9BZW4 377 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 EPS15L1Q9UBC2 864 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 MEI4A8MW99 385 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 SKAP2O75563 359 aaPredicted RBP11.23□□□□□ -0.61
NFKB1-205ENST00000505458 CDK14O94921 469 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 ESRRBO95718 433 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 IDO1P14902 403 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 LBPP18428 481 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 ACRV1P26436 265 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 EEF1DP29692 281 aaKnown RBP11.23□□□□□ -0.61
NFKB1-205ENST00000505458 NSG1P42857 185 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 PTK2BQ14289 1009 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 LARP4Q71RC2 724 aaKnown RBP eCLIP11.23□□□□□ -0.61
NFKB1-205ENST00000505458 CAMK1DQ8IU85 385 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 WDR60Q8WVS4 1066 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 DNAJC9Q8WXX5 260 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 ASIC4Q96FT7 647 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 MAGEB10Q96LZ2 347 aaPredicted RBP11.23□□□□□ -0.61
NFKB1-205ENST00000505458 FAM126AQ9BYI3 521 aaPredicted RBP11.23□□□□□ -0.61
NFKB1-205ENST00000505458 ASB8Q9H765 288 aa11.23□□□□□ -0.61
NFKB1-205ENST00000505458 LOC100653049A0A140TA62 436 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 AGAP14A8MT82 685 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 TLL1O43897 1013 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 KRT34O76011 436 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 MATN4O95460 622 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 SNRPB2P08579 225 aaKnown RBP11.22□□□□□ -0.61
NFKB1-205ENST00000505458 SPATA31D3P0C874 917 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 TSNQ15631 228 aaKnown RBP11.22□□□□□ -0.61
NFKB1-205ENST00000505458 SMU1Q2TAY7 513 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 SPATA31D4Q6ZUB0 917 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 GALNT13Q8IUC8 556 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 DSELQ8IZU8 1212 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 TWIST2Q8WVJ9 160 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 IRF7Q92985 503 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 EXT2Q93063 718 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 TIFAQ96CG3 184 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 RDH14Q9HBH5 336 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 KCTD5Q9NXV2 234 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 PKD2L2Q9NZM6 624 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 CD274Q9NZQ7 290 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 NKX1-2Q9UD57 310 aaPredicted RBP11.22□□□□□ -0.61
NFKB1-205ENST00000505458 SARDHQ9UL12 918 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 NDUFAF1Q9Y375 327 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 CCL16O15467 120 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 KRT36O76013 467 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 TSPAN12O95859 305 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 MSH3P20585 1137 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 ATP6V1C1P21283 382 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 CD70P32970 193 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 CLCN7P51798 805 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 ZXDBP98169 803 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 ECT2LQ008S8 904 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 MMEL1Q495T6 779 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 TMCO2Q7Z6W1 182 aaPredicted RBP11.22□□□□□ -0.61
NFKB1-205ENST00000505458 NXPE1Q8N323 547 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 TCAIMQ8N3R3 496 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 CATSPER1Q8NEC5 780 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 UBTD2Q8WUN7 234 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 UNKQ9C0B0 810 aaKnown RBP11.22□□□□□ -0.61
NFKB1-205ENST00000505458 WDR41Q9HAD4 459 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 ZDHHC3Q9NYG2 299 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 GRXCR2A6NFK2 248 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 H0Y3Z8 333 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 AIM2O14862 343 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 SRPRAP08240 638 aaKnown RBP11.22□□□□□ -0.61
NFKB1-205ENST00000505458 ENO2P09104 434 aaPredicted RBP11.22□□□□□ -0.61
NFKB1-205ENST00000505458 ANPEPP15144 967 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 MAPK9P45984 424 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 CCR10P46092 362 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 DCDC1P59894 354 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 FOXM1Q08050 763 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 ZNF77Q15935 545 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 SETMARQ53H47 684 aaPredicted RBP11.22□□□□□ -0.61
NFKB1-205ENST00000505458 KIAA0907Q7Z7F0 614 aaPredicted RBP11.22□□□□□ -0.61
NFKB1-205ENST00000505458 PDPRQ8NCN5 879 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 FBXO27Q8NI29 283 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 BBS2Q9BXC9 721 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 S100A14Q9HCY8 104 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 SPHK2Q9NRA0 654 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 SPATS2LQ9NUQ6 558 aaKnown RBP11.22□□□□□ -0.61
NFKB1-205ENST00000505458 POMPQ9Y244 141 aa11.22□□□□□ -0.61
NFKB1-205ENST00000505458 NUP210Q8TEM1 1887 aaPredicted RBP11.21□□□□□ -0.61
NFKB1-205ENST00000505458 NPEPPSL1A6NEC2 478 aa11.21□□□□□ -0.61
NFKB1-205ENST00000505458 NIPSNAP2O75323 286 aa11.21□□□□□ -0.61
NFKB1-205ENST00000505458 MT-CO1P00395 513 aa11.21□□□□□ -0.61
NFKB1-205ENST00000505458 ME2P23368 584 aa11.21□□□□□ -0.61
NFKB1-205ENST00000505458 HNF1BP35680 557 aa11.21□□□□□ -0.61
NFKB1-205ENST00000505458 PGGT1BP53609 377 aa11.21□□□□□ -0.61
NFKB1-205ENST00000505458 CDKN3Q16667 212 aa11.21□□□□□ -0.61
NFKB1-205ENST00000505458 PLPP4Q5VZY2 271 aa11.21□□□□□ -0.61
NFKB1-205ENST00000505458 GPRIN3Q6ZVF9 776 aa11.21□□□□□ -0.61
NFKB1-205ENST00000505458 APLFQ8IW19 511 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms