RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 ZNF599Q96NL3 588 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 EIF3CQ99613 913 aaKnown RBP6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 BRD8Q9H0E9 1235 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 ING2Q9H160 280 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 ZNF768Q9H5H4 540 aaKnown RBP6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 KLC4Q9NSK0 619 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 CWC15Q9P013 229 aaKnown RBP6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 SCHIP1Q9P0W5 487 aaPredicted RBP6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 VPS18Q9P253 973 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 TRIM10Q9UDY6 481 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 ERRFI1Q9UJM3 462 aaPredicted RBP6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 CHKBQ9Y259 395 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 DNAJC16Q9Y2G8 782 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 SHANK1Q9Y566 2161 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 SLC30A1Q9Y6M5 507 aa6.8□□□□□ -1.32
NPIPB3-203ENST00000504841 TEX15Q9BXT5 2789 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 A0A0J9YYE9 177 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 C1orf232A0A0U1RR37 186 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 A6NL46 340 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 OR5K4A6NMS3 321 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 C21orf140B9A014 251 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 SMAPO00193 183 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 GPR37O15354 613 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 MAFKO60675 156 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 LRCH4O75427 683 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 RNF8O76064 485 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 CLDN7O95471 211 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 PEX11BO96011 259 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 TRBC1P01850 177 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 MT-ND3P03897 115 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 TPM2P07951 284 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 FGF5P12034 268 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 ZNF30P17039 623 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 ZNF8P17098 575 aaPredicted RBP6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 EEF1GP26641 437 aaKnown RBP6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 PTPN4P29074 926 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 ARL4AP40617 200 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 ARL4DP49703 201 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 PPP1CAP62136 330 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 RPS15P62841 145 aaKnown RBP6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 PTSQ03393 145 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 MAMLD1Q13495 774 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 RAPSNQ13702 412 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 DPYSQ14117 519 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 KCNAB1Q14722 419 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 NR6A1Q15406 480 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 CHRNA6Q15825 494 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 UGT8Q16880 541 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 INSCQ1MX18 579 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 SLC6A19Q695T7 634 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 ACAD10Q6JQN1 1059 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 PWWP2BQ6NUJ5 590 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 JMJD6Q6NYC1 403 aaPredicted RBP6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 CYP4V2Q6ZWL3 525 aaPredicted RBP6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 ZNF765Q7L2R6 523 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 SYVN1Q86TM6 617 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 ARFGAP1Q8N6T3 406 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 Q8NA96 180 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 SIDT2Q8NBJ9 832 aaKnown RBP6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 NEK11Q8NG66 645 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 THAP4Q8WY91 577 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 HSPH1Q92598 858 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 MR1Q95460 341 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 AGPAT1Q99943 283 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 MLPHQ9BV36 600 aaPredicted RBP6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 TRIM7Q9C029 511 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 FAM83DQ9H4H8 585 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 ZWILCHQ9H900 591 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 AKIRIN1Q9H9L7 192 aaPredicted RBP6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 PDE7BQ9NP56 450 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 ETNK2Q9NVF9 386 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 TAS2R14Q9NYV8 317 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 ZNF624Q9P2J8 865 aaPredicted RBP6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 ATXN10Q9UBB4 475 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 RARRES3Q9UL19 164 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 SIK3Q9Y2K2 1263 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 ZNF451Q9Y4E5 1061 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 PCDHGA9Q9Y5G4 932 aaKnown RBP6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 PCDHGA6Q9Y5G7 932 aa6.79□□□□□ -1.32
NPIPB3-203ENST00000504841 OR52A4PA6NMU1 304 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 F5H423 210 aaPredicted RBP6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 C3orf80F5H4A9 247 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 ZNF185O15231 689 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 TOX3O15405 576 aaPredicted RBP6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 DDX3YO15523 660 aaKnown RBP6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 NUAK1O60285 661 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 DPM1O60762 260 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 MTX2O75431 263 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 LDLRP01130 860 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 EBLN1P0CF75 366 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 FOLR1P15328 257 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 RPL10P27635 214 aaKnown RBP6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 SLC19A1P41440 591 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 CAPZBP47756 277 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 DRG2P55039 364 aaKnown RBP6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 CDH6P55285 790 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 PDE1BQ01064 536 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 GPR18Q14330 331 aa6.78□□□□□ -1.32
NPIPB3-203ENST00000504841 KRT31Q15323 416 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms