RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 DUSP2Q05923 314 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 ITGB3BPQ13352 177 aaPredicted RBP5.2□□□□□ -1.58
NIPBL-204ENST00000504430 IQCB1Q15051 598 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 CXorf66Q5JRM2 361 aaPredicted RBP5.2□□□□□ -1.58
NIPBL-204ENST00000504430 ZNF648Q5T619 568 aaPredicted RBP5.2□□□□□ -1.58
NIPBL-204ENST00000504430 NELFCDQ8IXH7 590 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 SPATA4Q8NEY3 305 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 TMEM185AQ8NFB2 350 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 OR5M3Q8NGP4 307 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 SUN3Q8TAQ9 357 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 C2CD4CQ8TF44 421 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 FAM149B1Q96BN6 582 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 BSCL2Q96G97 398 aaPredicted RBP5.2□□□□□ -1.58
NIPBL-204ENST00000504430 FAM46AQ96IP4 442 aaKnown RBP5.2□□□□□ -1.58
NIPBL-204ENST00000504430 ZBTB18Q99592 522 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 POLR1EQ9GZS1 481 aaKnown RBP5.2□□□□□ -1.58
NIPBL-204ENST00000504430 ECT2Q9H8V3 914 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 KIF9Q9HAQ2 790 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 GLOD4Q9HC38 313 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 HYPKQ9NX55 129 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 GMEB1Q9Y692 573 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 A0A1B0GTQ1 180 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 MAGEA13PA6NCF6 341 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 OOEPA6NGQ2 149 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 LGALS8O00214 317 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 CTIFO43310 598 aaKnown RBP5.2□□□□□ -1.58
NIPBL-204ENST00000504430 NDUFS6O75380 124 aaKnown RBP5.2□□□□□ -1.58
NIPBL-204ENST00000504430 HAUS5O94927 633 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 ENO1P06733 434 aaKnown RBP5.2□□□□□ -1.58
NIPBL-204ENST00000504430 CSF1RP07333 972 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 ZGLP1P0C6A0 271 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 COX7A2P14406 83 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 CPOXP36551 454 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 MAGEB1P43366 347 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 RAB28P51157 221 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 MEF2AQ02078 507 aaPredicted RBP5.2□□□□□ -1.58
NIPBL-204ENST00000504430 IDI1Q13907 227 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 AANATQ16613 207 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 GCNT6Q5T4J0 391 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 ERICH5Q6P6B1 374 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 EFL1Q7Z2Z2 1120 aaKnown RBP5.2□□□□□ -1.58
NIPBL-204ENST00000504430 SPRED1Q7Z699 444 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 RTN4RL2Q86UN3 420 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 PALM2Q8IXS6 379 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 LILRA2Q8N149 483 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 ALG3Q92685 438 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 MAGED4Q96JG8 741 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 OR2A14Q96R47 310 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 VCX3BQ9H321 246 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 GDE1Q9NZC3 331 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 FZD10Q9ULW2 581 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 A0A087WZY1 265 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 SH3D21A4FU49 640 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 ARHGEF35A5YM69 484 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 NPIPB5A8MRT5 1133 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 POLRMTO00411 1230 aaKnown RBP5.2□□□□□ -1.58
NIPBL-204ENST00000504430 TLX3O43711 291 aaPredicted RBP5.2□□□□□ -1.58
NIPBL-204ENST00000504430 OTCP00480 354 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 CRHR1P34998 444 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 RPP38P78345 283 aaKnown RBP5.2□□□□□ -1.58
NIPBL-204ENST00000504430 ACSM1Q08AH1 577 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 MGAT5BQ3V5L5 792 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 RGS7BPQ6MZT1 257 aaPredicted RBP5.2□□□□□ -1.58
NIPBL-204ENST00000504430 ZNF852Q6ZMS4 543 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 GAS2L3Q86XJ1 694 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 RASGEF1AQ8N9B8 481 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 PSD4Q8NDX1 1056 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 PIGBQ92521 554 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 AP2M1Q96CW1 435 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 TMEM176AQ96HP8 235 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 SLC41A2Q96JW4 573 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 ABHD6Q9BV23 337 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 SAE1Q9UBE0 346 aaPredicted RBP5.2□□□□□ -1.58
NIPBL-204ENST00000504430 TNFRSF10DQ9UBN6 386 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 SERTAD3Q9UJW9 196 aa5.2□□□□□ -1.58
NIPBL-204ENST00000504430 HBS1LQ9Y450 684 aaKnown RBP5.2□□□□□ -1.58
NIPBL-204ENST00000504430 A0A0U1RQJ8 604 aa5.19□□□□□ -1.58
NIPBL-204ENST00000504430 DCXO43602 365 aa5.19□□□□□ -1.58
NIPBL-204ENST00000504430 TRUB2O95900 331 aaKnown RBP5.19□□□□□ -1.58
NIPBL-204ENST00000504430 TGM6O95932 706 aa5.19□□□□□ -1.58
NIPBL-204ENST00000504430 DBHP09172 617 aa5.19□□□□□ -1.58
NIPBL-204ENST00000504430 UMPSP11172 480 aa5.19□□□□□ -1.58
NIPBL-204ENST00000504430 RPA2P15927 270 aa5.19□□□□□ -1.58
NIPBL-204ENST00000504430 LCN1P31025 176 aa5.19□□□□□ -1.58
NIPBL-204ENST00000504430 GSTM5P46439 218 aa5.19□□□□□ -1.58
NIPBL-204ENST00000504430 LEPRP48357 1165 aaKnown RBP5.19□□□□□ -1.58
NIPBL-204ENST00000504430 POU3F4P49335 361 aa5.19□□□□□ -1.58
NIPBL-204ENST00000504430 GATMP50440 423 aa5.19□□□□□ -1.58
NIPBL-204ENST00000504430 PLCD1P51178 756 aa5.19□□□□□ -1.58
NIPBL-204ENST00000504430 TAS2R50P59544 299 aa5.19□□□□□ -1.58
NIPBL-204ENST00000504430 SNRPNP63162 240 aaKnown RBP5.19□□□□□ -1.58
NIPBL-204ENST00000504430 KRT76Q01546 638 aa5.19□□□□□ -1.58
NIPBL-204ENST00000504430 NAA35Q5VZE5 725 aa5.19□□□□□ -1.58
NIPBL-204ENST00000504430 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.19□□□□□ -1.58
NIPBL-204ENST00000504430 COMTD1Q86VU5 262 aa5.19□□□□□ -1.58
NIPBL-204ENST00000504430 SPARTQ8N0X7 666 aa5.19□□□□□ -1.58
NIPBL-204ENST00000504430 CSGALNACT2Q8N6G5 542 aa5.19□□□□□ -1.58
NIPBL-204ENST00000504430 DNASE1L2Q92874 299 aa5.19□□□□□ -1.58
NIPBL-204ENST00000504430 SGK3Q96BR1 496 aa5.19□□□□□ -1.58
NIPBL-204ENST00000504430 TRMT61AQ96FX7 289 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms