RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 ERVK-10P10266 1014 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 ZNF8P17098 575 aaPredicted RBP13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 HTR1BP28222 390 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 MAGEA4P43358 317 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 SRP54P61011 504 aaKnown RBP13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 OVGP1Q12889 678 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 BNIP3Q12983 259 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 C1orf61Q13536 156 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 ITGA9Q13797 1035 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 PTK2BQ14289 1009 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 PUM1Q14671 1186 aaKnown RBP eCLIP13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 CRYMQ14894 314 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 SHBQ15464 509 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 CSRP2Q16527 193 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 DBN1Q16643 649 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 ERCC6LQ2NKX8 1250 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 FAM153CQ494X1 144 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 FASTKD1Q53R41 847 aaKnown RBP13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 PDPK2PQ6A1A2 396 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 KIAA0930Q6ICG6 404 aaPredicted RBP13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 TRMT10BQ6PF06 316 aaKnown RBP13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 DCP2Q8IU60 420 aaKnown RBP13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 PHYKPLQ8IUZ5 450 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 NXPE1Q8N323 547 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 OTUD6BQ8N6M0 293 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 OR56A4Q8NGH8 313 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 FAM174AQ8TBP5 190 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 PYROXD1Q8WU10 500 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 VPS35Q96QK1 796 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 BOCQ9BWV1 1114 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 GAREM1Q9H706 876 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 TRIM39Q9HCM9 518 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 CYP4F12Q9HCS2 524 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 CATSPERZQ9NTU4 200 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 SLC17A6Q9P2U8 582 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 DNAH14Q0VDD8 3507 aa13.13□□□□□ -0.31
PDLIM7-212ENST00000504380 NCOR2Q9Y618 2525 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 TRBV5-4A0A0C4DH59 114 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 PRSS38A1L453 326 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 AGAP14A8MT82 685 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 TOR1BO14657 336 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 EIF3HO15372 352 aaKnown RBP eCLIP13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 CD3EAPO15446 510 aaKnown RBP13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 GDF9O60383 454 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 OR1I1O60431 355 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 MAGEC1O60732 1142 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 PIAS1O75925 651 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 RASGRP1O95267 797 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 CELA2BP08218 269 aaPredicted RBP13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 SYPP08247 313 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 JUNDP17535 347 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 ACRV1P26436 265 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 SSTR1P30872 391 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 AKT1P31749 480 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 GNPDA1P46926 289 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 GPX6P59796 221 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 B4GALNT1Q00973 533 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 PPARDQ03181 441 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 TMEM115Q12893 351 aaPredicted RBP13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 CUL1Q13616 776 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 LONRF1Q17RB8 773 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 PLA2G4EQ3MJ16 856 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 SPANXN3Q5MJ09 141 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 STEAP4Q687X5 459 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 CRTC3Q6UUV7 619 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 PRR23CQ6ZRP0 262 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 PARGQ86W56 976 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 PALM2Q8IXS6 379 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 KIAA2013Q8IYS2 634 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 PHACTR4Q8IZ21 702 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 MINDY1Q8N5J2 469 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 RASGEF1AQ8N9B8 481 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 DTX3LQ8TDB6 740 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 UBXN4Q92575 508 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 PEX13Q92968 403 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 LRRC39Q96DD0 335 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 FMO2Q99518 471 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 ELF4Q99607 663 aaPredicted RBP13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 C19orf43Q9BQ61 176 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 CARS2Q9HA77 564 aaKnown RBP13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 TM7SF3Q9NS93 570 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 IARS2Q9NSE4 1012 aaKnown RBP13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 SMOXQ9NWM0 555 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 ZDHHC3Q9NYG2 299 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 DLL3Q9NYJ7 618 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 MTRF1LQ9UGC7 380 aaKnown RBP13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 ZNHIT2Q9UHR6 403 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 SUFUQ9UMX1 484 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 SLC17A4Q9Y2C5 497 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 GPSM3Q9Y4H4 160 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 PRSS21Q9Y6M0 314 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 OTOGLQ3ZCN5 2332 aa13.12□□□□□ -0.31
PDLIM7-212ENST00000504380 LRP4O75096 1905 aa13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 CACNA1EQ15878 2313 aa13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 DNAJC6O75061 913 aa13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 CDK14O94921 469 aa13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 TNFP01375 233 aa13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 PAMP19021 973 aa13.11□□□□□ -0.31
PDLIM7-212ENST00000504380 MSH3P20585 1137 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms