RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 TMEM115Q12893 351 aaPredicted RBP18.01■□□□□ 0.47
PDLIM7-209ENST00000503346 GPS1Q13098 491 aa18.01■□□□□ 0.47
PDLIM7-209ENST00000503346 KCTD19Q17RG1 926 aaPredicted RBP18.01■□□□□ 0.47
PDLIM7-209ENST00000503346 GPRC6AQ5T6X5 926 aa18.01■□□□□ 0.47
PDLIM7-209ENST00000503346 SLC30A9Q6PML9 568 aa18.01■□□□□ 0.47
PDLIM7-209ENST00000503346 TMPRSS7Q7RTY8 843 aa18.01■□□□□ 0.47
PDLIM7-209ENST00000503346 EFL1Q7Z2Z2 1120 aaKnown RBP18.01■□□□□ 0.47
PDLIM7-209ENST00000503346 C17orf82Q86X59 251 aaPredicted RBP18.01■□□□□ 0.47
PDLIM7-209ENST00000503346 OR6C4Q8NGE1 309 aa18.01■□□□□ 0.47
PDLIM7-209ENST00000503346 GDAP1Q8TB36 358 aa18.01■□□□□ 0.47
PDLIM7-209ENST00000503346 CAPZA3Q96KX2 299 aa18.01■□□□□ 0.47
PDLIM7-209ENST00000503346 SCNM1Q9BWG6 230 aa18.01■□□□□ 0.47
PDLIM7-209ENST00000503346 ZCCHC2Q9C0B9 1178 aaKnown RBP18.01■□□□□ 0.47
PDLIM7-209ENST00000503346 ASB8Q9H765 288 aa18.01■□□□□ 0.47
PDLIM7-209ENST00000503346 RNF14Q9UBS8 474 aa18.01■□□□□ 0.47
PDLIM7-209ENST00000503346 RIMKLBQ9ULI2 386 aa18.01■□□□□ 0.47
PDLIM7-209ENST00000503346 NEUROG3Q9Y4Z2 214 aa18.01■□□□□ 0.47
PDLIM7-209ENST00000503346 HEATR9A2RTY3 570 aa18■□□□□ 0.47
PDLIM7-209ENST00000503346 CPED1A4D0V7 1026 aa18■□□□□ 0.47
PDLIM7-209ENST00000503346 B4DGG1 531 aa18■□□□□ 0.47
PDLIM7-209ENST00000503346 ITGALP20701 1170 aa18■□□□□ 0.47
PDLIM7-209ENST00000503346 ADRA1DP25100 572 aa18■□□□□ 0.47
PDLIM7-209ENST00000503346 VPS41P49754 854 aa18■□□□□ 0.47
PDLIM7-209ENST00000503346 CLCNKAP51800 687 aa18■□□□□ 0.47
PDLIM7-209ENST00000503346 ETF1P62495 437 aaKnown RBP18■□□□□ 0.47
PDLIM7-209ENST00000503346 GTF2H3Q13889 308 aa18■□□□□ 0.47
PDLIM7-209ENST00000503346 HLTFQ14527 1009 aaKnown RBP eCLIP18■□□□□ 0.47
PDLIM7-209ENST00000503346 KCNJ11Q14654 390 aa18■□□□□ 0.47
PDLIM7-209ENST00000503346 SKIDA1Q1XH10 827 aa18■□□□□ 0.47
PDLIM7-209ENST00000503346 C14orf28Q4W4Y0 310 aa18■□□□□ 0.47
PDLIM7-209ENST00000503346 CHST15Q7LFX5 561 aaPredicted RBP18■□□□□ 0.47
PDLIM7-209ENST00000503346 SNX20Q7Z614 316 aa18■□□□□ 0.47
PDLIM7-209ENST00000503346 LRRTM4Q86VH4 590 aa18■□□□□ 0.47
PDLIM7-209ENST00000503346 TMPRSS12Q86WS5 348 aa18■□□□□ 0.47
PDLIM7-209ENST00000503346 GALNT15Q8N3T1 639 aa18■□□□□ 0.47
PDLIM7-209ENST00000503346 ZDHHC1Q8WTX9 485 aa18■□□□□ 0.47
PDLIM7-209ENST00000503346 SLCO2A1Q92959 643 aa18■□□□□ 0.47
PDLIM7-209ENST00000503346 ULK4Q96C45 1275 aa18■□□□□ 0.47
PDLIM7-209ENST00000503346 CDKN2AIPNLQ96HQ2 116 aa18■□□□□ 0.47
PDLIM7-209ENST00000503346 KLK13Q9UKR3 277 aa18■□□□□ 0.47
PDLIM7-209ENST00000503346 TCRBV7S3A2A0A539 114 aa17.99■□□□□ 0.47
PDLIM7-209ENST00000503346 CCL22O00626 93 aa17.99■□□□□ 0.47
PDLIM7-209ENST00000503346 KMOO15229 486 aa17.99■□□□□ 0.47
PDLIM7-209ENST00000503346 ECEL1O95672 775 aa17.99■□□□□ 0.47
PDLIM7-209ENST00000503346 ACP5P13686 325 aa17.99■□□□□ 0.47
PDLIM7-209ENST00000503346 SPINK2P20155 84 aa17.99■□□□□ 0.47
PDLIM7-209ENST00000503346 MC4RP32245 332 aa17.99■□□□□ 0.47
PDLIM7-209ENST00000503346 INSM1Q01101 510 aaPredicted RBP17.99■□□□□ 0.47
PDLIM7-209ENST00000503346 GPR33Q49SQ1 333 aa17.99■□□□□ 0.47
PDLIM7-209ENST00000503346 CCDC38Q502W7 563 aa17.99■□□□□ 0.47
PDLIM7-209ENST00000503346 TSTD2Q5T7W7 516 aa17.99■□□□□ 0.47
PDLIM7-209ENST00000503346 LRRC8BQ6P9F7 803 aa17.99■□□□□ 0.47
PDLIM7-209ENST00000503346 CRTC3Q6UUV7 619 aa17.99■□□□□ 0.47
PDLIM7-209ENST00000503346 ZNF534Q76KX8 674 aa17.99■□□□□ 0.47
PDLIM7-209ENST00000503346 NLRP9Q7RTR0 991 aa17.99■□□□□ 0.47
PDLIM7-209ENST00000503346 ZNF547Q8IVP9 402 aa17.99■□□□□ 0.47
PDLIM7-209ENST00000503346 SFTPA2Q8IWL1 248 aa17.99■□□□□ 0.47
PDLIM7-209ENST00000503346 PEX13Q92968 403 aa17.99■□□□□ 0.47
PDLIM7-209ENST00000503346 TTC25Q96NG3 672 aa17.99■□□□□ 0.47
PDLIM7-209ENST00000503346 TIMM29Q9BSF4 260 aa17.99■□□□□ 0.47
PDLIM7-209ENST00000503346 DDX47Q9H0S4 455 aaKnown RBP17.99■□□□□ 0.47
PDLIM7-209ENST00000503346 PCYOX1Q9UHG3 505 aa17.99■□□□□ 0.47
PDLIM7-209ENST00000503346 TCAF1Q9Y4C2 921 aa17.99■□□□□ 0.47
PDLIM7-209ENST00000503346 SLC30A1Q9Y6M5 507 aa17.99■□□□□ 0.47
PDLIM7-209ENST00000503346 SPEGQ15772 3267 aa17.98■□□□□ 0.47
PDLIM7-209ENST00000503346 TRBV5-4A0A0C4DH59 114 aa17.98■□□□□ 0.47
PDLIM7-209ENST00000503346 OPA1O60313 960 aa17.98■□□□□ 0.47
PDLIM7-209ENST00000503346 GLB1P16278 677 aa17.98■□□□□ 0.47
PDLIM7-209ENST00000503346 PAFAH1B1P43034 410 aa17.98■□□□□ 0.47
PDLIM7-209ENST00000503346 NPY2RP49146 381 aa17.98■□□□□ 0.47
PDLIM7-209ENST00000503346 ARSDP51689 593 aa17.98■□□□□ 0.47
PDLIM7-209ENST00000503346 ACVR1Q04771 509 aa17.98■□□□□ 0.47
PDLIM7-209ENST00000503346 PERM1Q5SV97 790 aa17.98■□□□□ 0.47
PDLIM7-209ENST00000503346 NAGSQ8N159 534 aa17.98■□□□□ 0.47
PDLIM7-209ENST00000503346 CACTIN-AS1Q8N1I8 211 aa17.98■□□□□ 0.47
PDLIM7-209ENST00000503346 NXPE1Q8N323 547 aa17.98■□□□□ 0.47
PDLIM7-209ENST00000503346 RASGEF1AQ8N9B8 481 aa17.98■□□□□ 0.47
PDLIM7-209ENST00000503346 OR13J1Q8NGT2 312 aa17.98■□□□□ 0.47
PDLIM7-209ENST00000503346 CPT1BQ92523 772 aa17.98■□□□□ 0.47
PDLIM7-209ENST00000503346 IL22Q9GZX6 179 aa17.98■□□□□ 0.47
PDLIM7-209ENST00000503346 CRLS1Q9UJA2 301 aa17.98■□□□□ 0.47
PDLIM7-209ENST00000503346 KCNK6Q9Y257 313 aa17.98■□□□□ 0.47
PDLIM7-209ENST00000503346 MSRB2Q9Y3D2 182 aa17.98■□□□□ 0.47
PDLIM7-209ENST00000503346 PRR19A6NJB7 356 aa17.97■□□□□ 0.47
PDLIM7-209ENST00000503346 NUDT21O43809 227 aaKnown RBP17.97■□□□□ 0.47
PDLIM7-209ENST00000503346 PNLIPP16233 465 aa17.97■□□□□ 0.47
PDLIM7-209ENST00000503346 ZNF7P17097 686 aaPredicted RBP17.97■□□□□ 0.47
PDLIM7-209ENST00000503346 MSH3P20585 1137 aa17.97■□□□□ 0.47
PDLIM7-209ENST00000503346 CASQ1P31415 396 aa17.97■□□□□ 0.47
PDLIM7-209ENST00000503346 AKT1P31749 480 aa17.97■□□□□ 0.47
PDLIM7-209ENST00000503346 CTSCP53634 463 aa17.97■□□□□ 0.47
PDLIM7-209ENST00000503346 SESN2P58004 480 aaPredicted RBP17.97■□□□□ 0.47
PDLIM7-209ENST00000503346 SARNPP82979 210 aaKnown RBP17.97■□□□□ 0.47
PDLIM7-209ENST00000503346 CACNG1Q06432 222 aa17.97■□□□□ 0.47
PDLIM7-209ENST00000503346 PCID2Q5JVF3 399 aa17.97■□□□□ 0.47
PDLIM7-209ENST00000503346 HES3Q5TGS1 186 aa17.97■□□□□ 0.47
PDLIM7-209ENST00000503346 CDCP2Q5VXM1 449 aa17.97■□□□□ 0.47
PDLIM7-209ENST00000503346 CCNI2Q6ZMN8 369 aaPredicted RBP17.97■□□□□ 0.47
PDLIM7-209ENST00000503346 C11orf96Q7Z7L8 435 aa17.97■□□□□ 0.47
PDLIM7-209ENST00000503346 TRAPPC5Q8IUR0 188 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms