RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 CXCL14O95715 111 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 MT-CO1P00395 513 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 PENKP01210 267 aaPredicted RBP11.5□□□□□ -0.57
USP46-204ENST00000503060 C8AP07357 584 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 IMPDH1P20839 514 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 SP100P23497 879 aaPredicted RBP11.5□□□□□ -0.57
USP46-204ENST00000503060 FMO4P31512 558 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 SLC25A3Q00325 362 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 SULT2A1Q06520 285 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 ACCSLQ4AC99 568 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 METTL11BQ5VVY1 283 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 CCDC149Q6ZUS6 474 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 NANOGNBQ7Z5D8 188 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 BBS7Q8IWZ6 715 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 APCDD1Q8J025 514 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 CPXM2Q8N436 756 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 DDI1Q8WTU0 396 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 PHF21BQ96EK2 531 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 FAR2Q96K12 515 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 CLPTM1LQ96KA5 538 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 EML4Q9HC35 981 aaKnown RBP11.5□□□□□ -0.57
USP46-204ENST00000503060 IL23AQ9NPF7 189 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 WBP1LQ9NX94 342 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 ZIM2Q9NZV7 527 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 HACD3Q9P035 362 aa11.5□□□□□ -0.57
USP46-204ENST00000503060 TRAV19A0A0A6YYK7 116 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 LOC100653049A0A140TA62 436 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 TRPC5OSA6NMA1 111 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 ZBBXA8MT70 800 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 K7ERQ8 282 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 SMIM24O75264 130 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 KRT34O76011 436 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 SRP72O76094 671 aaKnown RBP11.49□□□□□ -0.57
USP46-204ENST00000503060 GNAZP19086 355 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 MC4RP32245 332 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 GALNSP34059 522 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 AP1S1P61966 158 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 NFKB2Q00653 900 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 PTPRRQ15256 657 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 NXNQ6DKJ4 435 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 RETSATQ6NUM9 610 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 FRMD7Q6ZUT3 714 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 NET1Q7Z628 596 aaPredicted RBP11.49□□□□□ -0.57
USP46-204ENST00000503060 RYBPQ8N488 228 aaPredicted RBP11.49□□□□□ -0.57
USP46-204ENST00000503060 CPSF7Q8N684 471 aaKnown RBP11.49□□□□□ -0.57
USP46-204ENST00000503060 KREMEN2Q8NCW0 462 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 L3HYPDHQ96EM0 354 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 GSTO2Q9H4Y5 243 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 ZNF385DQ9H6B1 395 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 BPIFA1Q9NP55 256 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 VPS9D1Q9Y2B5 631 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 PCDHB9Q9Y5E1 797 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 ANKRD36A6QL64 1941 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 A0A1W2PRU2 124 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 EME2A4GXA9 379 aaPredicted RBP11.49□□□□□ -0.57
USP46-204ENST00000503060 NRG2O14511 850 aaPredicted RBP11.49□□□□□ -0.57
USP46-204ENST00000503060 SDHDO14521 159 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 CIB2O75838 187 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 GJA1P17302 382 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 PIK3R1P27986 724 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 KRT20P35900 424 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 RAD52P43351 418 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 HTRA4P83105 476 aaPredicted RBP11.49□□□□□ -0.57
USP46-204ENST00000503060 GALNT1Q10472 559 aaPredicted RBP11.49□□□□□ -0.57
USP46-204ENST00000503060 FAPQ12884 760 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 OR4D1Q15615 310 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 MPPE1Q53F39 396 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 SETMARQ53H47 684 aaPredicted RBP11.49□□□□□ -0.57
USP46-204ENST00000503060 ZNF678Q5SXM1 525 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 PSAPL1Q6NUJ1 521 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 FAM180BQ6P0A1 224 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 FBXO46Q6PJ61 603 aaPredicted RBP11.49□□□□□ -0.57
USP46-204ENST00000503060 USP51Q70EK9 711 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 RPS27LQ71UM5 84 aaKnown RBP11.49□□□□□ -0.57
USP46-204ENST00000503060 CUZD1Q86UP6 607 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 PIANPQ8IYJ0 282 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 ELMOD1Q8N336 334 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 FAM136AQ96C01 138 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 MAELQ96JY0 434 aaKnown RBP11.49□□□□□ -0.57
USP46-204ENST00000503060 LENG8Q96PV6 779 aaPredicted RBP11.49□□□□□ -0.57
USP46-204ENST00000503060 TRMOQ9BU70 441 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 TFB2MQ9H5Q4 396 aaKnown RBP11.49□□□□□ -0.57
USP46-204ENST00000503060 SYTL2Q9HCH5 934 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 TAS2R13Q9NYV9 303 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 SLC7A8Q9UHI5 535 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 C15orf41Q9Y2V0 281 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 MED16Q9Y2X0 877 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 ANGPTL3Q9Y5C1 460 aa11.49□□□□□ -0.57
USP46-204ENST00000503060 A0A088AWK7 358 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 H3BMM5 538 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 H7C0S8 307 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 PLOD2O00469 737 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 SLC22A2O15244 555 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 SMAD6O43541 496 aaKnown RBP11.48□□□□□ -0.57
USP46-204ENST00000503060 PSMG1O95456 288 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 ADH1AP07327 375 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 ITGAXP20702 1163 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 PSMD7P51665 324 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 LMAN2Q12907 356 aa11.48□□□□□ -0.57
USP46-204ENST00000503060 PEX6Q13608 980 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms