RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 PRAMEF1O95521 474 aa12.64□□□□□ -0.39
HSPG2-213ENST00000498495 ZSCAN5DPP0CG00 497 aa12.64□□□□□ -0.39
HSPG2-213ENST00000498495 RPL22P35268 128 aaKnown RBP12.64□□□□□ -0.39
HSPG2-213ENST00000498495 MAZP56270 477 aaKnown RBP12.64□□□□□ -0.39
HSPG2-213ENST00000498495 CCL7P80098 99 aa12.64□□□□□ -0.39
HSPG2-213ENST00000498495 CDH17Q12864 832 aa12.64□□□□□ -0.39
HSPG2-213ENST00000498495 POU6F1Q14863 301 aa12.64□□□□□ -0.39
HSPG2-213ENST00000498495 INSCQ1MX18 579 aa12.64□□□□□ -0.39
HSPG2-213ENST00000498495 CRTC3Q6UUV7 619 aa12.64□□□□□ -0.39
HSPG2-213ENST00000498495 RBM44Q6ZP01 1051 aaKnown RBP12.64□□□□□ -0.39
HSPG2-213ENST00000498495 C17orf82Q86X59 251 aaPredicted RBP12.64□□□□□ -0.39
HSPG2-213ENST00000498495 PRELID2Q8N945 189 aa12.64□□□□□ -0.39
HSPG2-213ENST00000498495 KDF1Q8NAX2 398 aaPredicted RBP12.64□□□□□ -0.39
HSPG2-213ENST00000498495 GLIS1Q8NBF1 620 aa12.64□□□□□ -0.39
HSPG2-213ENST00000498495 OR52K1Q8NGK4 314 aa12.64□□□□□ -0.39
HSPG2-213ENST00000498495 PATE1Q8WXA2 126 aa12.64□□□□□ -0.39
HSPG2-213ENST00000498495 GFM1Q96RP9 751 aaKnown RBP12.64□□□□□ -0.39
HSPG2-213ENST00000498495 NAP1L3Q99457 506 aaPredicted RBP12.64□□□□□ -0.39
HSPG2-213ENST00000498495 C19orf43Q9BQ61 176 aa12.64□□□□□ -0.39
HSPG2-213ENST00000498495 ZCCHC2Q9C0B9 1178 aaKnown RBP12.64□□□□□ -0.39
HSPG2-213ENST00000498495 LRRN3Q9H3W5 708 aa12.64□□□□□ -0.39
HSPG2-213ENST00000498495 KLC4Q9NSK0 619 aa12.64□□□□□ -0.39
HSPG2-213ENST00000498495 PIH1D1Q9NWS0 290 aaKnown RBP12.64□□□□□ -0.39
HSPG2-213ENST00000498495 RABGEF1Q9UJ41 708 aa12.64□□□□□ -0.39
HSPG2-213ENST00000498495 AK5Q9Y6K8 562 aa12.64□□□□□ -0.39
HSPG2-213ENST00000498495 OR5K4A6NMS3 321 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 NTN3O00634 580 aaPredicted RBP12.63□□□□□ -0.39
HSPG2-213ENST00000498495 GAPDHSO14556 408 aaPredicted RBP12.63□□□□□ -0.39
HSPG2-213ENST00000498495 SUN1O94901 812 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 RPLP0P05388 317 aaKnown RBP12.63□□□□□ -0.39
HSPG2-213ENST00000498495 APRTP07741 180 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 SLC2A4P14672 509 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 ZNF7P17097 686 aaPredicted RBP12.63□□□□□ -0.39
HSPG2-213ENST00000498495 VCLP18206 1134 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 MSH3P20585 1137 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 ALDH4A1P30038 563 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 CLCNKAP51800 687 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 XIAPP98170 497 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 CYP4F3Q08477 520 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 SEMA5AQ13591 1074 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 SEPT6Q14141 434 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 ST3GAL2Q16842 350 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 SKIDA1Q1XH10 827 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 ISXQ2M1V0 245 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 KHDC1Q4VXA5 237 aaKnown RBP12.63□□□□□ -0.39
HSPG2-213ENST00000498495 GPRC6AQ5T6X5 926 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 IYDQ6PHW0 289 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 TMEM220Q6QAJ8 160 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 TRAPPC5Q8IUR0 188 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 CCNJLQ8IV13 435 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 DDHD1Q8NEL9 900 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 MDM1Q8TC05 714 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 STYXQ8WUJ0 223 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 MAGOHBQ96A72 148 aaKnown RBP12.63□□□□□ -0.39
HSPG2-213ENST00000498495 GRAMD1AQ96CP6 724 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 CDKN2AIPNLQ96HQ2 116 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 OSBPL9Q96SU4 736 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 AP1M1Q9BXS5 423 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 NRSN2Q9GZP1 204 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 OSGEPL1Q9H4B0 414 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 TBC1D29Q9UFV1 150 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 CRLS1Q9UJA2 301 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 TTC7AQ9ULT0 858 aaPredicted RBP12.63□□□□□ -0.39
HSPG2-213ENST00000498495 DNAJC16Q9Y2G8 782 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 SLC30A1Q9Y6M5 507 aa12.63□□□□□ -0.39
HSPG2-213ENST00000498495 GOLGA4Q13439 2230 aaKnown RBP12.62□□□□□ -0.39
HSPG2-213ENST00000498495 A0A1W2PQM1 296 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 USP27XA6NNY8 438 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 CASC3O15234 703 aaKnown RBP12.62□□□□□ -0.39
HSPG2-213ENST00000498495 PPM1DO15297 605 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 GPR39O43194 453 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 B4GAT1O43505 415 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 KCNJ13O60928 360 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 POP7O75817 140 aaKnown RBP12.62□□□□□ -0.39
HSPG2-213ENST00000498495 F3P13726 295 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 ITGALP20701 1170 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 IDSP22304 550 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 AKT1P31749 480 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 MC4RP32245 332 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 CA5AP35218 305 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 GRIA1P42261 906 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 ZNF140P52738 457 aaPredicted RBP12.62□□□□□ -0.39
HSPG2-213ENST00000498495 BASP1P80723 227 aaKnown RBP12.62□□□□□ -0.39
HSPG2-213ENST00000498495 B4GALNT1Q00973 533 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 NFATC2Q13469 925 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 LAMB3Q13751 1172 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 PLA2G4EQ3MJ16 856 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 ZRANB3Q5FWF4 1079 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 SNX20Q7Z614 316 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 SLC9B2Q86UD5 537 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 ZNF547Q8IVP9 402 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 RASGEF1AQ8N9B8 481 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 ACTRT1Q8TDG2 376 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 COG1Q8WTW3 980 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 ZCCHC14Q8WYQ9 949 aaKnown RBP12.62□□□□□ -0.39
HSPG2-213ENST00000498495 ULK4Q96C45 1275 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 NXPE2Q96DL1 559 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 DCUN1D1Q96GG9 259 aa12.62□□□□□ -0.39
HSPG2-213ENST00000498495 DNAJC1Q96KC8 554 aaKnown RBP12.62□□□□□ -0.39
HSPG2-213ENST00000498495 SLC38A3Q99624 504 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms