RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 HACD2Q6Y1H2 254 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 GDPD3Q7L5L3 318 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 DYNC2LI1Q8TCX1 351 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 TWIST2Q8WVJ9 160 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 FAM151AQ8WW52 585 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 KHSRPQ92945 711 aaKnown RBP eCLIP12.98□□□□□ -0.333e-7■■□□□ 14.2
GAPVD1-220ENST00000497580 EMID1Q96A84 441 aaPredicted RBP12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 NECTIN4Q96NY8 510 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 BCO2Q9BYV7 579 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 NTN4Q9HB63 628 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 FBXO8Q9NRD0 319 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 AASDHPPTQ9NRN7 309 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 SYNPO2Q9UMS6 1093 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 WBP11Q9Y2W2 641 aaKnown RBP12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 SNX8Q9Y5X2 465 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 ZW10O43264 779 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 MITFO75030 526 aaPredicted RBP12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 CPNE3O75131 537 aaKnown RBP12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 CNTN5O94779 1100 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 MT-CYBP00156 380 aaPredicted RBP12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 MT-ND2P03891 347 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 LCKP06239 509 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 ZNF37AP17032 561 aaPredicted RBP12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 HTR2BP41595 481 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 GALK2Q01415 458 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 PSMD5Q16401 504 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 SMN1Q16637 294 aaKnown RBP12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 UGP2Q16851 508 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 NXNL2Q5VZ03 156 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 VSIG10LQ86VR7 867 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 MINDY1Q8N5J2 469 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 RDM1Q8NG50 284 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 NUDT8Q8WV74 236 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 TP53INP1Q96A56 240 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 NUAK2Q9H093 628 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 TOR4AQ9NXH8 423 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 ABCD2Q9UBJ2 740 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 A0A1W2PQ72 361 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 TCRBV5S2A0A599 114 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 C12orf71A8MTZ7 269 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 EGFRP00533 1210 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 DEFA1P59665 94 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 DEFA3P59666 94 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 CBLBQ13191 982 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 AGAP9Q5VTM2 703 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 AGAP6Q5VW22 663 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 ZPBP2Q6X784 338 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 NLGN4XQ8N0W4 816 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 DEFB106AQ8N104 65 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 TEX37Q96LM6 180 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 NSUN5Q96P11 429 aaKnown RBP12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 AGAP4Q96P64 663 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 C8orf4Q9NR00 106 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 ORC6Q9Y5N6 252 aa12.98□□□□□ -0.33
GAPVD1-220ENST00000497580 DNAH12Q6ZR08 3092 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 LOC100130705A0A1B0GUX0 176 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 LOC105371267A0A1B0GV96 52 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 MTSS1O43312 755 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 PMPCBO75439 489 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 RGS20O76081 388 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 HRH2P25021 359 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 AZGP1P25311 298 aaKnown RBP12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 ZNF404Q494X3 552 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 TPRG1LQ5T0D9 272 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 SULT1C3Q6IMI6 304 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 C8orf82Q6P1X6 216 aaPredicted RBP12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 LCLAT1Q6UWP7 414 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 CYHR1Q6ZMK1 362 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 STMN3Q9NZ72 180 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 INTS6Q9UL03 887 aaKnown RBP12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 DNAJC15Q9Y5T4 150 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 MAGEB16A2A368 324 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 PRMT5O14744 637 aaPredicted RBP12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 GOT2P00505 430 aaKnown RBP12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 CYP2C18P33260 490 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 HADHAP40939 763 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 SLC26A2P50443 739 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 CLCA4Q14CN2 919 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 TBRG1Q3YBR2 411 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 DCP1BQ8IZD4 617 aaKnown RBP12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 JPH3Q8WXH2 748 aaPredicted RBP12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 MAP6Q96JE9 813 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 HBEGFQ99075 208 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 SLIRPQ9GZT3 109 aaKnown RBP12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 TNKS2Q9H2K2 1166 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 CASS4Q9NQ75 786 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 TEKT2Q9UIF3 430 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 EIF3LQ9Y262 564 aaKnown RBP12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 MAU2Q9Y6X3 613 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 BCKDKO14874 412 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 FAM20BO75063 409 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 C1RP00736 705 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 ZNF135P52742 658 aaPredicted RBP12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 UFM1P61960 85 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 SP2Q02086 613 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 RAPSNQ13702 412 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 PCSK7Q16549 785 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 TRIM60Q495X7 471 aa12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 SOWAHCQ53LP3 525 aaPredicted RBP12.97□□□□□ -0.33
GAPVD1-220ENST00000497580 GPR158Q5T848 1215 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms