RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 ADSSL1Q8N142 457 aa3.63□□□□□ -1.83
CD46-218ENST00000496723 SLC24A4Q8NFF2 622 aa3.63□□□□□ -1.83
CD46-218ENST00000496723 UTP15Q8TED0 518 aaKnown RBP3.63□□□□□ -1.83
CD46-218ENST00000496723 C1orf74Q96LT6 269 aa3.63□□□□□ -1.83
CD46-218ENST00000496723 SMC6Q96SB8 1091 aa3.63□□□□□ -1.83
CD46-218ENST00000496723 POLR3GLQ9BT43 218 aa3.63□□□□□ -1.83
CD46-218ENST00000496723 SIL1Q9H173 461 aa3.63□□□□□ -1.83
CD46-218ENST00000496723 LRMDAQ9H2I8 198 aa3.63□□□□□ -1.83
CD46-218ENST00000496723 UBA2Q9UBT2 640 aaPredicted RBP3.63□□□□□ -1.83
CD46-218ENST00000496723 FBXW11Q9UKB1 542 aa3.63□□□□□ -1.83
CD46-218ENST00000496723 CORO1CQ9ULV4 474 aaPredicted RBP3.63□□□□□ -1.83
CD46-218ENST00000496723 FAF1Q9UNN5 650 aaPredicted RBP3.63□□□□□ -1.83
CD46-218ENST00000496723 TDRD9Q8NDG6 1382 aaKnown RBP3.63□□□□□ -1.83
CD46-218ENST00000496723 RUSC2Q8N2Y8 1516 aa3.62□□□□□ -1.83
CD46-218ENST00000496723 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.62□□□□□ -1.83
CD46-218ENST00000496723 ZCWPW2A0A1B0GU75 182 aa3.62□□□□□ -1.83
CD46-218ENST00000496723 KANSL1LA0AUZ9 987 aa3.62□□□□□ -1.83
CD46-218ENST00000496723 SLC22A3O75751 556 aa3.62□□□□□ -1.83
CD46-218ENST00000496723 DDX58O95786 925 aaKnown RBP3.62□□□□□ -1.83
CD46-218ENST00000496723 TNFAIP3P21580 790 aa3.62□□□□□ -1.83
CD46-218ENST00000496723 PAX3P23760 479 aa3.62□□□□□ -1.83
CD46-218ENST00000496723 TFAP4Q01664 338 aa3.62□□□□□ -1.83
CD46-218ENST00000496723 DDX10Q13206 875 aaKnown RBP3.62□□□□□ -1.83
CD46-218ENST00000496723 ZSCAN23Q3MJ62 389 aa3.62□□□□□ -1.83
CD46-218ENST00000496723 SOWAHCQ53LP3 525 aaPredicted RBP3.62□□□□□ -1.83
CD46-218ENST00000496723 SIRPB2Q5JXA9 342 aa3.62□□□□□ -1.83
CD46-218ENST00000496723 FAAH2Q6GMR7 532 aa3.62□□□□□ -1.83
CD46-218ENST00000496723 LCN10Q6JVE6 187 aa3.62□□□□□ -1.83
CD46-218ENST00000496723 C19orf48Q6RUI8 117 aa3.62□□□□□ -1.83
CD46-218ENST00000496723 MARK2Q7KZI7 788 aaKnown RBP3.62□□□□□ -1.83
CD46-218ENST00000496723 OR8K5Q8NH50 307 aa3.62□□□□□ -1.83
CD46-218ENST00000496723 OR52I2Q8NH67 350 aa3.62□□□□□ -1.83
CD46-218ENST00000496723 HDAC2Q92769 488 aaKnown RBP3.62□□□□□ -1.83
CD46-218ENST00000496723 ALG14Q96F25 216 aa3.62□□□□□ -1.83
CD46-218ENST00000496723 LINGO1Q96FE5 620 aa3.62□□□□□ -1.83
CD46-218ENST00000496723 EGLN2Q96KS0 407 aa3.62□□□□□ -1.83
CD46-218ENST00000496723 MUC13Q9H3R2 512 aa3.62□□□□□ -1.83
CD46-218ENST00000496723 MAGIXQ9H6Y5 334 aa3.62□□□□□ -1.83
CD46-218ENST00000496723 ZNF334Q9HCZ1 680 aaPredicted RBP3.62□□□□□ -1.83
CD46-218ENST00000496723 KRT84Q9NSB2 600 aa3.62□□□□□ -1.83
CD46-218ENST00000496723 MTMR10Q9NXD2 777 aa3.62□□□□□ -1.83
CD46-218ENST00000496723 MTMR6Q9Y217 621 aa3.62□□□□□ -1.83
CD46-218ENST00000496723 A0A087X0M5 115 aa3.61□□□□□ -1.83
CD46-218ENST00000496723 A0A1B0GX30 115 aa3.61□□□□□ -1.83
CD46-218ENST00000496723 OR5K3A6NET4 321 aa3.61□□□□□ -1.83
CD46-218ENST00000496723 PRR23AA6NEV1 266 aa3.61□□□□□ -1.83
CD46-218ENST00000496723 EIF3DO15371 548 aaKnown RBP eCLIP3.61□□□□□ -1.83
CD46-218ENST00000496723 DAB1O75553 588 aa3.61□□□□□ -1.83
CD46-218ENST00000496723 LAMP2P13473 410 aa3.61□□□□□ -1.83
CD46-218ENST00000496723 RARGP13631 454 aa3.61□□□□□ -1.83
CD46-218ENST00000496723 CDH2P19022 906 aaPredicted RBP3.61□□□□□ -1.83
CD46-218ENST00000496723 CD53P19397 219 aa3.61□□□□□ -1.83
CD46-218ENST00000496723 ARL3P36405 182 aa3.61□□□□□ -1.83
CD46-218ENST00000496723 PPARGP37231 505 aaPredicted RBP3.61□□□□□ -1.83
CD46-218ENST00000496723 HOXA1P49639 335 aaPredicted RBP3.61□□□□□ -1.83
CD46-218ENST00000496723 MMP14P50281 582 aa3.61□□□□□ -1.83
CD46-218ENST00000496723 SETQ01105 290 aaPredicted RBP3.61□□□□□ -1.83
CD46-218ENST00000496723 RUNX1T1Q06455 604 aa3.61□□□□□ -1.83
CD46-218ENST00000496723 SREBF2Q12772 1141 aa3.61□□□□□ -1.83
CD46-218ENST00000496723 LRMPQ12912 555 aa3.61□□□□□ -1.83
CD46-218ENST00000496723 DMP1Q13316 513 aaPredicted RBP3.61□□□□□ -1.83
CD46-218ENST00000496723 CCDC6Q16204 474 aa3.61□□□□□ -1.83
CD46-218ENST00000496723 GKAP1Q5VSY0 366 aaPredicted RBP3.61□□□□□ -1.83
CD46-218ENST00000496723 SNX30Q5VWJ9 437 aa3.61□□□□□ -1.83
CD46-218ENST00000496723 ATG9AQ7Z3C6 839 aa3.61□□□□□ -1.83
CD46-218ENST00000496723 MAATS1Q7Z4T9 603 aa3.61□□□□□ -1.83
CD46-218ENST00000496723 RASGEF1CQ8N431 466 aa3.61□□□□□ -1.83
CD46-218ENST00000496723 POMGNT1Q8WZA1 660 aa3.61□□□□□ -1.83
CD46-218ENST00000496723 PGLYRP2Q96PD5 576 aa3.61□□□□□ -1.83
CD46-218ENST00000496723 SEMA3CQ99985 751 aa3.61□□□□□ -1.83
CD46-218ENST00000496723 ITPAQ9BY32 194 aa3.61□□□□□ -1.83
CD46-218ENST00000496723 SH2D4AQ9H788 454 aa3.61□□□□□ -1.83
CD46-218ENST00000496723 EPB41L5Q9HCM4 733 aa3.61□□□□□ -1.83
CD46-218ENST00000496723 TCP11L1Q9NUJ3 509 aa3.61□□□□□ -1.83
CD46-218ENST00000496723 MARCH4Q9P2E8 410 aaPredicted RBP3.61□□□□□ -1.83
CD46-218ENST00000496723 POLG2Q9UHN1 485 aa3.61□□□□□ -1.83
CD46-218ENST00000496723 ARHGEF40Q8TER5 1519 aa3.6□□□□□ -1.83
CD46-218ENST00000496723 A0A1W2PP11 408 aa3.6□□□□□ -1.83
CD46-218ENST00000496723 CTAGE9A4FU28 777 aa3.6□□□□□ -1.83
CD46-218ENST00000496723 TMEM178BH3BS89 294 aa3.6□□□□□ -1.83
CD46-218ENST00000496723 SCAMP1O15126 338 aa3.6□□□□□ -1.83
CD46-218ENST00000496723 USO1O60763 962 aaKnown RBP3.6□□□□□ -1.83
CD46-218ENST00000496723 CTAGE8P0CG41 777 aa3.6□□□□□ -1.83
CD46-218ENST00000496723 TMEM11P17152 192 aa3.6□□□□□ -1.83
CD46-218ENST00000496723 ANXA7P20073 488 aaKnown RBP3.6□□□□□ -1.83
CD46-218ENST00000496723 ANOS1P23352 680 aa3.6□□□□□ -1.83
CD46-218ENST00000496723 AHRP35869 848 aa3.6□□□□□ -1.83
CD46-218ENST00000496723 ARCN1P48444 511 aaKnown RBP3.6□□□□□ -1.83
CD46-218ENST00000496723 MAMLD1Q13495 774 aa3.6□□□□□ -1.83
CD46-218ENST00000496723 EIF4A2Q14240 407 aaKnown RBP3.6□□□□□ -1.83
CD46-218ENST00000496723 CEP85LQ5SZL2 805 aa3.6□□□□□ -1.83
CD46-218ENST00000496723 CCDC30Q5VVM6 783 aa3.6□□□□□ -1.83
CD46-218ENST00000496723 ACSM2BQ68CK6 577 aa3.6□□□□□ -1.83
CD46-218ENST00000496723 KLHL35Q6PF15 583 aa3.6□□□□□ -1.83
CD46-218ENST00000496723 SARM1Q6SZW1 724 aa3.6□□□□□ -1.83
CD46-218ENST00000496723 PLEKHM3Q6ZWE6 761 aa3.6□□□□□ -1.83
CD46-218ENST00000496723 IKBIPQ70UQ0 350 aa3.6□□□□□ -1.83
CD46-218ENST00000496723 RSRC2Q7L4I2 434 aaKnown RBP3.6□□□□□ -1.83
CD46-218ENST00000496723 TSPAN33Q86UF1 283 aa3.6□□□□□ -1.83
CD46-218ENST00000496723 CCDC190Q86UF4 302 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms