RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 KLHL23Q8NBE8 558 aa15.21■□□□□ 0.03
CALD1-222ENST00000495522 EEF1AKMT1Q8WVE0 214 aa15.21■□□□□ 0.03
CALD1-222ENST00000495522 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.21■□□□□ 0.031e-7■■■■■ 35.3
CALD1-222ENST00000495522 EME1Q96AY2 570 aa15.21■□□□□ 0.03
CALD1-222ENST00000495522 GID8Q9NWU2 228 aa15.21■□□□□ 0.03
CALD1-222ENST00000495522 IRAK4Q9NWZ3 460 aa15.21■□□□□ 0.03
CALD1-222ENST00000495522 ABCD2Q9UBJ2 740 aa15.21■□□□□ 0.03
CALD1-222ENST00000495522 PKP3Q9Y446 797 aa15.21■□□□□ 0.03
CALD1-222ENST00000495522 SCN5AQ14524 2016 aa15.21■□□□□ 0.02
CALD1-222ENST00000495522 LATS1O95835 1130 aa15.21■□□□□ 0.02
CALD1-222ENST00000495522 MZF1P28698 734 aaPredicted RBP15.21■□□□□ 0.02
CALD1-222ENST00000495522 CLCN2P51788 898 aa15.21■□□□□ 0.02
CALD1-222ENST00000495522 RHOAP61586 193 aa15.21■□□□□ 0.02
CALD1-222ENST00000495522 ECT2LQ008S8 904 aa15.21■□□□□ 0.02
CALD1-222ENST00000495522 RBBP7Q16576 425 aa15.21■□□□□ 0.02
CALD1-222ENST00000495522 UGT3A1Q6NUS8 523 aa15.21■□□□□ 0.02
CALD1-222ENST00000495522 OR56A4Q8NGH8 313 aa15.21■□□□□ 0.02
CALD1-222ENST00000495522 LRTOMTQ8WZ04 291 aa15.21■□□□□ 0.02
CALD1-222ENST00000495522 SLCO4A1Q96BD0 722 aa15.21■□□□□ 0.02
CALD1-222ENST00000495522 HGH1Q9BTY7 390 aa15.21■□□□□ 0.02
CALD1-222ENST00000495522 PFDN4Q9NQP4 134 aa15.21■□□□□ 0.02
CALD1-222ENST00000495522 SMPD4Q9NXE4 827 aa15.21■□□□□ 0.02
CALD1-222ENST00000495522 TIMM22Q9Y584 194 aa15.21■□□□□ 0.02
CALD1-222ENST00000495522 H0YJX3 145 aa15.2■□□□□ 0.02
CALD1-222ENST00000495522 GIPC1O14908 333 aa15.2■□□□□ 0.02
CALD1-222ENST00000495522 PQBP1O60828 265 aaKnown RBP15.2■□□□□ 0.02
CALD1-222ENST00000495522 CXCL10P02778 98 aa15.2■□□□□ 0.02
CALD1-222ENST00000495522 PRR35P0CG20 571 aa15.2■□□□□ 0.02
CALD1-222ENST00000495522 MBL2P11226 248 aaPredicted RBP15.2■□□□□ 0.02
CALD1-222ENST00000495522 MRPL19P49406 292 aaKnown RBP15.2■□□□□ 0.02
CALD1-222ENST00000495522 CACNG1Q06432 222 aa15.2■□□□□ 0.02
CALD1-222ENST00000495522 PTPRRQ15256 657 aa15.2■□□□□ 0.02
CALD1-222ENST00000495522 CPNE9Q8IYJ1 553 aa15.2■□□□□ 0.02
CALD1-222ENST00000495522 HJURPQ8NCD3 748 aaPredicted RBP15.2■□□□□ 0.02
CALD1-222ENST00000495522 OR2T34Q8NGX1 318 aa15.2■□□□□ 0.02
CALD1-222ENST00000495522 OR2T3Q8NH03 318 aa15.2■□□□□ 0.02
CALD1-222ENST00000495522 TSPEARQ8WU66 669 aa15.2■□□□□ 0.02
CALD1-222ENST00000495522 UHRF1Q96T88 793 aaPredicted RBP15.2■□□□□ 0.02
CALD1-222ENST00000495522 FEM1AQ9BSK4 669 aa15.2■□□□□ 0.02
CALD1-222ENST00000495522 IL1RL2Q9HB29 575 aa15.2■□□□□ 0.02
CALD1-222ENST00000495522 UBAP1Q9NZ09 502 aa15.2■□□□□ 0.02
CALD1-222ENST00000495522 CD274Q9NZQ7 290 aa15.2■□□□□ 0.02
CALD1-222ENST00000495522 IL17CQ9P0M4 197 aa15.2■□□□□ 0.02
CALD1-222ENST00000495522 ZNF711Q9Y462 761 aa15.2■□□□□ 0.02
CALD1-222ENST00000495522 GPR45Q9Y5Y3 372 aa15.2■□□□□ 0.02
CALD1-222ENST00000495522 TYW5A2RUC4 315 aaKnown RBP15.19■□□□□ 0.02
CALD1-222ENST00000495522 NME4O00746 187 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 FZD6O60353 706 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 CYBBP04839 570 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 ZNF26P17031 533 aaPredicted RBP15.19■□□□□ 0.02
CALD1-222ENST00000495522 PRDX3P30048 256 aaKnown RBP15.19■□□□□ 0.02
CALD1-222ENST00000495522 HK3P52790 923 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 CCL23P55773 120 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 SMAD3P84022 425 aaKnown RBP15.19■□□□□ 0.02
CALD1-222ENST00000495522 FOXM1Q08050 763 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 GRIK2Q13002 908 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 XKR7Q5GH72 579 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 PITRM1Q5JRX3 1037 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 BLOC1S3Q6QNY0 202 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 ZUFSPQ96AP4 578 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 LRCH3Q96II8 777 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 CNBD2Q96M20 576 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 GPR63Q9BZJ6 419 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 TRIM15Q9C019 465 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 SARS2Q9NP81 518 aaKnown RBP15.19■□□□□ 0.02
CALD1-222ENST00000495522 AIG1Q9NVV5 245 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 PCDHB9Q9Y5E1 797 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 SLC30A1Q9Y6M5 507 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 EME2A4GXA9 379 aaPredicted RBP15.19■□□□□ 0.02
CALD1-222ENST00000495522 GOLGA8CPA6NN73 597 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 FXYD1O00168 92 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 SOD2P04179 222 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 HSD17B1P14061 328 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 GRIA2P42262 883 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 DIO3P55073 304 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 CDKL1Q00532 357 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 C6orf52Q5T4I8 152 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 SLC30A9Q6PML9 568 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 GPRIN3Q6ZVF9 776 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 AHI1Q8N157 1196 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 ZFRQ96KR1 1074 aaKnown RBP15.19■□□□□ 0.02
CALD1-222ENST00000495522 CCT7Q99832 543 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 SPATA16Q9BXB7 569 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 P2RY12Q9H244 342 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 SEMA6AQ9H2E6 1030 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 MAGEE1Q9HCI5 957 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 PAPOLBQ9NRJ5 636 aaKnown RBP15.19■□□□□ 0.02
CALD1-222ENST00000495522 NUDT4Q9NZJ9 180 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 EIF2B4Q9UI10 523 aaKnown RBP15.19■□□□□ 0.02
CALD1-222ENST00000495522 VPS51Q9UID3 782 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 ZNF225Q9UK10 706 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 CNOT6Q9ULM6 557 aaKnown RBP15.19■□□□□ 0.02
CALD1-222ENST00000495522 FCF1Q9Y324 198 aaKnown RBP15.19■□□□□ 0.02
CALD1-222ENST00000495522 SNX13Q9Y5W8 968 aa15.19■□□□□ 0.02
CALD1-222ENST00000495522 TANC1Q9C0D5 1861 aa15.18■□□□□ 0.02
CALD1-222ENST00000495522 A0A0U1RQS6 177 aa15.18■□□□□ 0.02
CALD1-222ENST00000495522 ZNF839A8K0R7 811 aa15.18■□□□□ 0.02
CALD1-222ENST00000495522 C9JVG2 144 aa15.18■□□□□ 0.02
CALD1-222ENST00000495522 CSPG5O95196 566 aa15.18■□□□□ 0.02
CALD1-222ENST00000495522 TNFAIP8O95379 198 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms