RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 ALPIP09923 528 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 TFEBP19484 476 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 CHRM3P20309 590 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 VIPR1P32241 457 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 SOX9P48436 509 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 RGS4P49798 205 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 CORO7P57737 925 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 IL2P60568 153 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 ELP6Q0PNE2 266 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 OVGP1Q12889 678 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 RCN2Q14257 317 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 PTPRNQ16849 979 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 FNDC3BQ53EP0 1204 aaKnown RBP10.18□□□□□ -0.78
HDAC3-214ENST00000495485 ZNF805Q5CZA5 627 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 EOGTQ5NDL2 527 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 RBM20Q5T481 1227 aaKnown RBP10.18□□□□□ -0.78
HDAC3-214ENST00000495485 PTRHD1Q6GMV3 140 aaKnown RBP10.18□□□□□ -0.78
HDAC3-214ENST00000495485 CGB2Q6NT52 195 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 Q6ZVU0 165 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 SYT13Q7L8C5 426 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 CENPLQ8N0S6 344 aaPredicted RBP10.18□□□□□ -0.78
HDAC3-214ENST00000495485 CAMKK1Q8N5S9 505 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 ST13P5Q8NFI4 369 aaPredicted RBP10.18□□□□□ -0.78
HDAC3-214ENST00000495485 OR2A12Q8NGT7 310 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 OR6K2Q8NGY2 324 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 OR8D1Q8WZ84 308 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 LPGAT1Q92604 370 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 KCNJ9Q92806 393 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 CHFRQ96EP1 664 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 RILPQ96NA2 401 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 KLHL32Q96NJ5 620 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 PANX3Q96QZ0 392 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 MCCC1Q96RQ3 725 aaPredicted RBP10.18□□□□□ -0.78
HDAC3-214ENST00000495485 NDNQ99608 321 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 LRFN3Q9BTN0 628 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 TRMOQ9BU70 441 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 TMEM120AQ9BXJ8 343 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 DERL2Q9GZP9 239 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 DRC3Q9H069 523 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 BPIFA1Q9NP55 256 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 C11orf16Q9NQ32 467 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 DYRK4Q9NR20 520 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 SAR1AQ9NR31 198 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 ZNF358Q9NW07 568 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 DNAJC28Q9NX36 388 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 KCTD5Q9NXV2 234 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 DLGAP2Q9P1A6 1054 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 CPSF2Q9P2I0 782 aaKnown RBP10.18□□□□□ -0.78
HDAC3-214ENST00000495485 XPR1Q9UBH6 696 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 SLCO3A1Q9UIG8 710 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 DCTN4Q9UJW0 460 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 NDRG2Q9UN36 371 aaKnown RBP10.18□□□□□ -0.78
HDAC3-214ENST00000495485 RAP2CQ9Y3L5 183 aa10.18□□□□□ -0.78
HDAC3-214ENST00000495485 CFAP73A6NFT4 308 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 TRPC5OSA6NMA1 111 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 C1QTNF3-AMACRE9PGA6 284 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 CCL22O00626 93 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 LAMTOR5O43504 91 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 GALR2O43603 387 aaPredicted RBP10.17□□□□□ -0.78
HDAC3-214ENST00000495485 DNAJC6O75061 913 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 IPO13O94829 963 aaKnown RBP10.17□□□□□ -0.78
HDAC3-214ENST00000495485 PRAMEF1O95521 474 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 ZNF37AP17032 561 aaPredicted RBP10.17□□□□□ -0.78
HDAC3-214ENST00000495485 NSG1P42857 185 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 GLRBP48167 497 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 XIAPP98170 497 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 GALNT1Q10472 559 aaPredicted RBP10.17□□□□□ -0.78
HDAC3-214ENST00000495485 FZD5Q13467 585 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 NFATC2Q13469 925 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 PEX6Q13608 980 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 PTPRCAPQ14761 206 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 ZRSR2Q15696 482 aaKnown RBP10.17□□□□□ -0.78
HDAC3-214ENST00000495485 GEN1Q17RS7 908 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 TTLL9Q3SXZ7 439 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 ZNF789Q5FWF6 425 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 TECRLQ5HYJ1 363 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 CRTC1Q6UUV9 634 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 LDB1Q86U70 411 aaPredicted RBP10.17□□□□□ -0.78
HDAC3-214ENST00000495485 C1orf210Q8IVY1 113 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 DTWD2Q8NBA8 298 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 TMIEQ8NEW7 156 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 STON2Q8WXE9 905 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 NSMCE3Q96MG7 304 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 OLFM1Q99784 485 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 FOXQ1Q9C009 403 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 PFDN4Q9NQP4 134 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 IGSF5Q9NSI5 407 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 KLHL42Q9P2K6 505 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 HEY2Q9UBP5 337 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 MMP17Q9ULZ9 603 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 TRIM33Q9UPN9 1127 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 DNAJC16Q9Y2G8 782 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 FNDC3AQ9Y2H6 1198 aaKnown RBP10.17□□□□□ -0.78
HDAC3-214ENST00000495485 HCN4Q9Y3Q4 1203 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 FAM186AA6NE01 2351 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 PLXND1Q9Y4D7 1925 aa10.17□□□□□ -0.78
HDAC3-214ENST00000495485 ZNF106Q9H2Y7 1883 aaKnown RBP10.17□□□□□ -0.78
HDAC3-214ENST00000495485 TRBV5-4A0A0C4DH59 114 aa10.16□□□□□ -0.78
HDAC3-214ENST00000495485 TSPAN11A1L157 253 aa10.16□□□□□ -0.78
HDAC3-214ENST00000495485 PABPN1LA6NDY0 278 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms