RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	TLE3	Q04726	772 aa		10.16	□□□□□ -0.78
NEPRO-222	ENST00000494891	KIR2DS5	Q14953	304 aa		10.16	□□□□□ -0.78
NEPRO-222	ENST00000494891	TCEA2	Q15560	299 aa		10.16	□□□□□ -0.78
NEPRO-222	ENST00000494891	COL28A1	Q2UY09	1125 aa		10.16	□□□□□ -0.78
NEPRO-222	ENST00000494891	C3orf38	Q5JPI3	329 aa		10.16	□□□□□ -0.78
NEPRO-222	ENST00000494891	RAB11FIP2	Q7L804	512 aa		10.16	□□□□□ -0.78
NEPRO-222	ENST00000494891	KDELC2	Q7Z4H8	507 aa		10.16	□□□□□ -0.78
NEPRO-222	ENST00000494891	PIM3	Q86V86	326 aa		10.16	□□□□□ -0.78
NEPRO-222	ENST00000494891	CCDC112	Q8NEF3	446 aa		10.16	□□□□□ -0.78
NEPRO-222	ENST00000494891	OR4D9	Q8NGE8	314 aa		10.16	□□□□□ -0.78
NEPRO-222	ENST00000494891	SH3KBP1	Q96B97	665 aa		10.16	□□□□□ -0.78
NEPRO-222	ENST00000494891	RTP4	Q96DX8	246 aa		10.16	□□□□□ -0.78
NEPRO-222	ENST00000494891	FSD1L	Q9BXM9	530 aa		10.16	□□□□□ -0.78
NEPRO-222	ENST00000494891	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	10.16	□□□□□ -0.78
NEPRO-222	ENST00000494891	TSGA10	Q9BZW7	698 aa		10.16	□□□□□ -0.78
NEPRO-222	ENST00000494891	EPB41L1	Q9H4G0	881 aa		10.16	□□□□□ -0.78
NEPRO-222	ENST00000494891	PRORY	Q9H606	182 aa		10.16	□□□□□ -0.78
NEPRO-222	ENST00000494891	TBC1D29	Q9UFV1	150 aa		10.16	□□□□□ -0.78
NEPRO-222	ENST00000494891	ZNHIT2	Q9UHR6	403 aa		10.16	□□□□□ -0.78
NEPRO-222	ENST00000494891	TMPRSS11E	Q9UL52	423 aa		10.16	□□□□□ -0.78
NEPRO-222	ENST00000494891	PLEKHM1	Q9Y4G2	1056 aa		10.16	□□□□□ -0.78
NEPRO-222	ENST00000494891	CACNA1G	O43497	2377 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	MACROD2	A1Z1Q3	448 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	KLHL33	A6NCF5	533 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	GAPDHS	O14556	408 aa	Predicted RBP	10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	ARHGAP6	O43182	974 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	KRT86	O43790	486 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	XRCC1	P18887	633 aa	Predicted RBP	10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	UGT1A5	P35504	534 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	SPAM1	P38567	509 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	CHRNA4	P43681	627 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	LIMK2	P53671	638 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	PDE1B	Q01064	536 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	DMPK	Q09013	629 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	ITGA9	Q13797	1035 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	TAF1A	Q15573	450 aa	Predicted RBP	10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	ATP13A5	Q4VNC0	1218 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	LDLRAP1	Q5SW96	308 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	FAM182A	Q5T1J6	154 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	CCDC181	Q5TID7	509 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	AGAP9	Q5VTM2	703 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	KCTD11	Q693B1	232 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	WDR74	Q6RFH5	385 aa	Predicted RBP	10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	ABRAXAS1	Q6UWZ7	409 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	ZNF574	Q6ZN55	896 aa	Predicted RBP	10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	MARK2	Q7KZI7	788 aa	Known RBP	10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	CHST15	Q7LFX5	561 aa	Predicted RBP	10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	TMPRSS9	Q7Z410	1059 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	GLT6D1	Q7Z4J2	308 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	C11orf96	Q7Z7L8	435 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	PDZD3	Q86UT5	571 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	LRRTM4	Q86VH4	590 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	ZNF547	Q8IVP9	402 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	SPACA3	Q8IXA5	215 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	FBXO39	Q8N4B4	442 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	LSM14A	Q8ND56	463 aa	Known RBP	10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	DDHD1	Q8NEL9	900 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	IPMK	Q8NFU5	416 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	SLC35B2	Q8TB61	432 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	SLC37A2	Q8TED4	501 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	HNRNPLL	Q8WVV9	542 aa	Known RBP	10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	PATE1	Q8WXA2	126 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	CMKLR1	Q99788	373 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	OR2AG1	Q9H205	316 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	PKP3	Q9Y446	797 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	CAPN6	Q9Y6Q1	641 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	AHCTF1	Q8WYP5	2266 aa		10.15	□□□□□ -0.78
NEPRO-222	ENST00000494891	SMG1	Q96Q15	3661 aa	Known RBP	10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	GLYATL1P3	A0A0U1RQE8	302 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	LILRA5	A6NI73	299 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	KCNN4	O15554	427 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	CDK14	O94921	469 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	TNFSF15	O95150	251 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	EML2	O95834	649 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	THRA	P10827	490 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	ACP5	P13686	325 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	ZNF7	P17097	686 aa	Predicted RBP	10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	LPO	P22079	712 aa	Predicted RBP	10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	PSMA3	P25788	255 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	ITPKB	P27987	946 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	STIP1	P31948	543 aa	Known RBP	10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	OR1D5	P58170	312 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	UBE2I	P63279	158 aa	Known RBP	10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	HHEX	Q03014	270 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	CFHR1	Q03591	330 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	TMEM115	Q12893	351 aa	Predicted RBP	10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	PRPSAP1	Q14558	356 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	PARP6	Q2NL67	630 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	ALS2CL	Q60I27	953 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	DENND5A	Q6IQ26	1287 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	AADACL2	Q6P093	401 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	DARS2	Q6PI48	645 aa	Known RBP	10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	C19orf48	Q6RUI8	117 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	SLC9B2	Q86UD5	537 aa		10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	RBM12B	Q8IXT5	1001 aa	Known RBP	10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891		Q8N9G6	341 aa	Predicted RBP	10.14	□□□□□ -0.79
NEPRO-222	ENST00000494891	SPC24	Q8NBT2	197 aa		10.14	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms