RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 KMOO15229 486 aa15.74■□□□□ 0.11
LIME1-209ENST00000494776 ZNF185O15231 689 aa15.74■□□□□ 0.11
LIME1-209ENST00000494776 GPR39O43194 453 aa15.74■□□□□ 0.11
LIME1-209ENST00000494776 LDB2O43679 373 aa15.74■□□□□ 0.11
LIME1-209ENST00000494776 SNX2O60749 519 aa15.74■□□□□ 0.11
LIME1-209ENST00000494776 SUN1O94901 812 aa15.74■□□□□ 0.11
LIME1-209ENST00000494776 ECEL1O95672 775 aa15.74■□□□□ 0.11
LIME1-209ENST00000494776 GLB1P16278 677 aa15.74■□□□□ 0.11
LIME1-209ENST00000494776 TCP1P17987 556 aaKnown RBP15.74■□□□□ 0.11
LIME1-209ENST00000494776 MSH3P20585 1137 aa15.74■□□□□ 0.11
LIME1-209ENST00000494776 ITGALP20701 1170 aa15.74■□□□□ 0.11
LIME1-209ENST00000494776 AKT1P31749 480 aa15.74■□□□□ 0.11
LIME1-209ENST00000494776 TARDBPQ13148 414 aaKnown RBP eCLIP15.74■□□□□ 0.11
LIME1-209ENST00000494776 LAMB3Q13751 1172 aa15.74■□□□□ 0.11
LIME1-209ENST00000494776 HLTFQ14527 1009 aaKnown RBP eCLIP15.74■□□□□ 0.11
LIME1-209ENST00000494776 TRIP13Q15645 432 aaPredicted RBP15.74■□□□□ 0.11
LIME1-209ENST00000494776 PLA2G4EQ3MJ16 856 aa15.74■□□□□ 0.11
LIME1-209ENST00000494776 UNQ6494/PRO21346Q6UXR6 183 aa15.74■□□□□ 0.11
LIME1-209ENST00000494776 TRAPPC5Q8IUR0 188 aa15.74■□□□□ 0.11
LIME1-209ENST00000494776 SFTPA2Q8IWL1 248 aa15.74■□□□□ 0.11
LIME1-209ENST00000494776 Q8N9G6 341 aaPredicted RBP15.74■□□□□ 0.11
LIME1-209ENST00000494776 STYXQ8WUJ0 223 aa15.74■□□□□ 0.11
LIME1-209ENST00000494776 DNAJC1Q96KC8 554 aaKnown RBP15.74■□□□□ 0.11
LIME1-209ENST00000494776 OSGEPL1Q9H4B0 414 aa15.74■□□□□ 0.11
LIME1-209ENST00000494776 KLC4Q9NSK0 619 aa15.74■□□□□ 0.11
LIME1-209ENST00000494776 CRLS1Q9UJA2 301 aa15.74■□□□□ 0.11
LIME1-209ENST00000494776 PCYT1BQ9Y5K3 369 aaPredicted RBP15.74■□□□□ 0.11
LIME1-209ENST00000494776 ST14Q9Y5Y6 855 aa15.74■□□□□ 0.11
LIME1-209ENST00000494776 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.74■□□□□ 0.11
LIME1-209ENST00000494776 TRBV23OR9-2A0A075B6M9 112 aa15.73■□□□□ 0.11
LIME1-209ENST00000494776 CCDC78A2IDD5 438 aa15.73■□□□□ 0.11
LIME1-209ENST00000494776 CCL22O00626 93 aa15.73■□□□□ 0.11
LIME1-209ENST00000494776 GAPDHSO14556 408 aaPredicted RBP15.73■□□□□ 0.11
LIME1-209ENST00000494776 CHUKO15111 745 aa15.73■□□□□ 0.11
LIME1-209ENST00000494776 ZW10O43264 779 aa15.73■□□□□ 0.11
LIME1-209ENST00000494776 KRT14P02533 472 aa15.73■□□□□ 0.11
LIME1-209ENST00000494776 VCLP18206 1134 aa15.73■□□□□ 0.11
LIME1-209ENST00000494776 MC4RP32245 332 aa15.73■□□□□ 0.11
LIME1-209ENST00000494776 COILP38432 576 aaPredicted RBP15.73■□□□□ 0.11
LIME1-209ENST00000494776 VPS41P49754 854 aa15.73■□□□□ 0.11
LIME1-209ENST00000494776 TERF1P54274 439 aa15.73■□□□□ 0.11
LIME1-209ENST00000494776 MAZP56270 477 aaKnown RBP15.73■□□□□ 0.11
LIME1-209ENST00000494776 NFATC2Q13469 925 aa15.73■□□□□ 0.11
LIME1-209ENST00000494776 SKIDA1Q1XH10 827 aa15.73■□□□□ 0.11
LIME1-209ENST00000494776 KHDC1Q4VXA5 237 aaKnown RBP15.73■□□□□ 0.11
LIME1-209ENST00000494776 CCDC38Q502W7 563 aa15.73■□□□□ 0.11
LIME1-209ENST00000494776 ZRANB3Q5FWF4 1079 aa15.73■□□□□ 0.11
LIME1-209ENST00000494776 CERCAMQ5T4B2 595 aa15.73■□□□□ 0.11
LIME1-209ENST00000494776 GPRC6AQ5T6X5 926 aa15.73■□□□□ 0.11
LIME1-209ENST00000494776 CCDC137Q6PK04 289 aaKnown RBP15.73■□□□□ 0.11
LIME1-209ENST00000494776 NAGSQ8N159 534 aa15.73■□□□□ 0.11
LIME1-209ENST00000494776 ARL14Q8N4G2 192 aa15.73■□□□□ 0.11
LIME1-209ENST00000494776 DDHD1Q8NEL9 900 aa15.73■□□□□ 0.11
LIME1-209ENST00000494776 WDR48Q8TAF3 677 aa15.73■□□□□ 0.11
LIME1-209ENST00000494776 ULK4Q96C45 1275 aa15.73■□□□□ 0.11
LIME1-209ENST00000494776 DCUN1D1Q96GG9 259 aa15.73■□□□□ 0.11
LIME1-209ENST00000494776 DEPDC7Q96QD5 511 aa15.73■□□□□ 0.11
LIME1-209ENST00000494776 NAPGQ99747 312 aaPredicted RBP15.73■□□□□ 0.11
LIME1-209ENST00000494776 C19orf43Q9BQ61 176 aa15.73■□□□□ 0.11
LIME1-209ENST00000494776 NLE1Q9NVX2 485 aaPredicted RBP15.73■□□□□ 0.11
LIME1-209ENST00000494776 SMOXQ9NWM0 555 aa15.73■□□□□ 0.11
LIME1-209ENST00000494776 DNAJC16Q9Y2G8 782 aa15.73■□□□□ 0.11
LIME1-209ENST00000494776 RNF215Q9Y6U7 377 aa15.73■□□□□ 0.11
LIME1-209ENST00000494776 HEATR9A2RTY3 570 aa15.72■□□□□ 0.11
LIME1-209ENST00000494776 CTAGE9A4FU28 777 aa15.72■□□□□ 0.11
LIME1-209ENST00000494776 C1QTNF9BB2RNN3 333 aa15.72■□□□□ 0.11
LIME1-209ENST00000494776 NUDT21O43809 227 aaKnown RBP15.72■□□□□ 0.11
LIME1-209ENST00000494776 C1QTNF9P0C862 333 aa15.72■□□□□ 0.11
LIME1-209ENST00000494776 RALBP11234 206 aa15.72■□□□□ 0.11
LIME1-209ENST00000494776 SLC2A4P14672 509 aa15.72■□□□□ 0.11
LIME1-209ENST00000494776 ZNF7P17097 686 aaPredicted RBP15.72■□□□□ 0.11
LIME1-209ENST00000494776 GRIA1P42261 906 aa15.72■□□□□ 0.11
LIME1-209ENST00000494776 PPM1FP49593 454 aaPredicted RBP15.72■□□□□ 0.11
LIME1-209ENST00000494776 XIAPP98170 497 aa15.72■□□□□ 0.11
LIME1-209ENST00000494776 GPS1Q13098 491 aa15.72■□□□□ 0.11
LIME1-209ENST00000494776 SPIDRQ14159 915 aa15.72■□□□□ 0.11
LIME1-209ENST00000494776 TTC27Q6P3X3 843 aa15.72■□□□□ 0.11
LIME1-209ENST00000494776 TMEM220Q6QAJ8 160 aa15.72■□□□□ 0.11
LIME1-209ENST00000494776 RBM44Q6ZP01 1051 aaKnown RBP15.72■□□□□ 0.11
LIME1-209ENST00000494776 TAS2R42Q7RTR8 314 aa15.72■□□□□ 0.11
LIME1-209ENST00000494776 GRK7Q8WTQ7 553 aa15.72■□□□□ 0.11
LIME1-209ENST00000494776 PATE1Q8WXA2 126 aa15.72■□□□□ 0.11
LIME1-209ENST00000494776 GATA6Q92908 595 aa15.72■□□□□ 0.11
LIME1-209ENST00000494776 CAPZA3Q96KX2 299 aa15.72■□□□□ 0.11
LIME1-209ENST00000494776 FAM96AQ9H5X1 160 aa15.72■□□□□ 0.11
LIME1-209ENST00000494776 CASS4Q9NQ75 786 aa15.72■□□□□ 0.11
LIME1-209ENST00000494776 EIF2B3Q9NR50 452 aaKnown RBP15.72■□□□□ 0.11
LIME1-209ENST00000494776 TBC1D29Q9UFV1 150 aa15.72■□□□□ 0.11
LIME1-209ENST00000494776 SCN8AQ9UQD0 1980 aa15.72■□□□□ 0.11
LIME1-209ENST00000494776 MAP1BP46821 2468 aaKnown RBP15.71■□□□□ 0.11
LIME1-209ENST00000494776 OR2AG2A6NM03 316 aa15.71■□□□□ 0.11
LIME1-209ENST00000494776 AP3B1O00203 1094 aa15.71■□□□□ 0.11
LIME1-209ENST00000494776 PHF2O75151 1096 aa15.71■□□□□ 0.11
LIME1-209ENST00000494776 RPLP0P05388 317 aaKnown RBP15.71■□□□□ 0.11
LIME1-209ENST00000494776 PNLIPP16233 465 aa15.71■□□□□ 0.11
LIME1-209ENST00000494776 ADRA1DP25100 572 aa15.71■□□□□ 0.11
LIME1-209ENST00000494776 ALDH4A1P30038 563 aa15.71■□□□□ 0.11
LIME1-209ENST00000494776 CA5AP35218 305 aa15.71■□□□□ 0.11
LIME1-209ENST00000494776 SESN2P58004 480 aaPredicted RBP15.71■□□□□ 0.11
LIME1-209ENST00000494776 CCL7P80098 99 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms