RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 ACRV1P26436 265 aa10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 UGT1A3P35503 534 aa10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 UGT1A5P35504 534 aa10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 SPAM1P38567 509 aa10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 RAP1GDS1P52306 607 aa10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 COPAP53621 1224 aa10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 CDH13P55290 713 aa10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 SH3BP2P78314 561 aa10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 PTSQ03393 145 aa10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 DUSP6Q16828 381 aa10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 PFKFB4Q16877 469 aa10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 GAB4Q2WGN9 574 aa10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 EML3Q32P44 896 aa10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 GRAMD4Q6IC98 578 aa10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 ACAD11Q709F0 780 aa10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 C12orf40Q86WS4 652 aa10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 SUGP1Q8IWZ8 645 aaKnown RBP10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 CELF5Q8N6W0 485 aaKnown RBP10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 KIAA1958Q8N8K9 716 aa10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 NAT16Q8N8M0 369 aa10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 CYB5D2Q8WUJ1 264 aa10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 PDLIM5Q96HC4 596 aaKnown RBP10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 FAR2Q96K12 515 aa10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 LBHD1Q9BQE6 289 aaPredicted RBP10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 C1QTNF3Q9BXJ4 246 aa10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 ASB8Q9H765 288 aa10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 BRD9Q9H8M2 597 aa10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 EML4Q9HC35 981 aaKnown RBP10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 CD248Q9HCU0 757 aa10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 APPL1Q9UKG1 709 aa10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 RNF112Q9ULX5 631 aa10.53□□□□□ -0.72
PRPF4B-209ENST00000494674 A0A1B0GTL3 188 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 TTC34A8MYJ7 566 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 SUPT3HB4E1H0 165 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 BTN3A1O00481 513 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 SLC22A2O15244 555 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 HOXC11O43248 304 aaPredicted RBP10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 ENTPD5O75356 428 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 SUPT3HO75486 399 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 SKAP2O75563 359 aaPredicted RBP10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 COX4I1P13073 169 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 PIK3R1P27986 724 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 PGM1P36871 562 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 PBX2P40425 430 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 VIPR2P41587 438 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 VASPP50552 380 aaPredicted RBP10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 PTPN5P54829 565 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 IL2P60568 153 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 MESP2Q0VG99 397 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 SHHQ15465 462 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 GPR33Q49SQ1 333 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 ACCSLQ4AC99 568 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 DNAL1Q4LDG9 190 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 LRRC73Q5JTD7 316 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 TRIM68Q6AZZ1 485 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 CLEC6AQ6EIG7 209 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 TMC5Q6UXY8 1006 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 GDPD4Q6W3E5 623 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 USP45Q70EL2 814 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 CHSY3Q70JA7 882 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 NPAS3Q8IXF0 933 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 ETFBKMTQ8IXQ9 262 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 RBFAQ8N0V3 343 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 NXPE1Q8N323 547 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 CLDN19Q8N6F1 224 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 HMGCLL1Q8TB92 370 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 ACTRT2Q8TDY3 377 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 WDR60Q8WVS4 1066 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 PLEKHG4BQ96PX9 1271 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 B4GALT6Q9UBX8 382 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 DPP7Q9UHL4 492 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 TMPRSS11EQ9UL52 423 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 TRAF6Q9Y4K3 522 aa10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.52□□□□□ -0.73
PRPF4B-209ENST00000494674 STX16-NPEPL1H3BU86 382 aa10.51□□□□□ -0.73
PRPF4B-209ENST00000494674 STX16O14662 325 aa10.51□□□□□ -0.73
PRPF4B-209ENST00000494674 TM7SF2O76062 418 aa10.51□□□□□ -0.73
PRPF4B-209ENST00000494674 CTSLP07711 333 aa10.51□□□□□ -0.73
PRPF4B-209ENST00000494674 FGF4P08620 206 aa10.51□□□□□ -0.73
PRPF4B-209ENST00000494674 ADH5P11766 374 aa10.51□□□□□ -0.73
PRPF4B-209ENST00000494674 GFAPP14136 432 aa10.51□□□□□ -0.73
PRPF4B-209ENST00000494674 ZNF7P17097 686 aaPredicted RBP10.51□□□□□ -0.73
PRPF4B-209ENST00000494674 POLR2EP19388 210 aaKnown RBP10.51□□□□□ -0.73
PRPF4B-209ENST00000494674 CHRM3P20309 590 aa10.51□□□□□ -0.73
PRPF4B-209ENST00000494674 ITGAXP20702 1163 aa10.51□□□□□ -0.73
PRPF4B-209ENST00000494674 EEF1DP29692 281 aaKnown RBP10.51□□□□□ -0.73
PRPF4B-209ENST00000494674 ADSLP30566 484 aaPredicted RBP10.51□□□□□ -0.73
PRPF4B-209ENST00000494674 PPARGP37231 505 aaPredicted RBP10.51□□□□□ -0.73
PRPF4B-209ENST00000494674 AGTR2P50052 363 aa10.51□□□□□ -0.73
PRPF4B-209ENST00000494674 SLC25A3Q00325 362 aa10.51□□□□□ -0.73
PRPF4B-209ENST00000494674 B4GALNT1Q00973 533 aa10.51□□□□□ -0.73
PRPF4B-209ENST00000494674 FAM78AQ5JUQ0 283 aa10.51□□□□□ -0.73
PRPF4B-209ENST00000494674 SBSNQ6UWP8 590 aa10.51□□□□□ -0.73
PRPF4B-209ENST00000494674 MACC1Q6ZN28 852 aa10.51□□□□□ -0.73
PRPF4B-209ENST00000494674 FBXO39Q8N4B4 442 aa10.51□□□□□ -0.73
PRPF4B-209ENST00000494674 PAF1Q8N7H5 531 aa10.51□□□□□ -0.73
PRPF4B-209ENST00000494674 ZNF483Q8TF39 744 aaPredicted RBP10.51□□□□□ -0.73
PRPF4B-209ENST00000494674 OSCP1Q8WVF1 389 aa10.51□□□□□ -0.73
PRPF4B-209ENST00000494674 MCUR1Q96AQ8 359 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms