RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 OR1F2PQ96R84 312 aa4.38□□□□□ -1.71
SMC4-224ENST00000494612 ABHD1Q96SE0 405 aa4.38□□□□□ -1.71
SMC4-224ENST00000494612 DDOQ99489 341 aa4.38□□□□□ -1.71
SMC4-224ENST00000494612 SPRY4Q9C004 299 aa4.38□□□□□ -1.71
SMC4-224ENST00000494612 LTB4R2Q9NPC1 389 aa4.38□□□□□ -1.71
SMC4-224ENST00000494612 SEC63Q9UGP8 760 aaKnown RBP4.38□□□□□ -1.71
SMC4-224ENST00000494612 PLAGL1Q9UM63 463 aa4.38□□□□□ -1.71
SMC4-224ENST00000494612 PDS5AQ29RF7 1337 aaKnown RBP4.38□□□□□ -1.71
SMC4-224ENST00000494612 RIMBP3CA6NJZ7 1639 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 RIMBP3BA6NNM3 1639 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 RIMBP3Q9UFD9 1639 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 A0A0U1RQJ8 604 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 ADAM20O43506 726 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 RSL1D1O76021 490 aaKnown RBP4.37□□□□□ -1.71
SMC4-224ENST00000494612 DDNO94850 711 aaPredicted RBP4.37□□□□□ -1.71
SMC4-224ENST00000494612 GAS8-AS1O95177 125 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 BCL10O95999 233 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 IGHV4-30-4P0DP06 118 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 RRM1P23921 792 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 CORO1AP31146 461 aaKnown RBP4.37□□□□□ -1.71
SMC4-224ENST00000494612 HSD17B4P51659 736 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 CLDN20P56880 219 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 SEC61BP60468 96 aaKnown RBP4.37□□□□□ -1.71
SMC4-224ENST00000494612 ISL1P61371 349 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 COG7P83436 770 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 KRT33BQ14525 404 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 NFATC4Q14934 902 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 SF3B4Q15427 424 aaKnown RBP eCLIP4.37□□□□□ -1.717e-8■■■■■ 35
SMC4-224ENST00000494612 PCGF3Q3KNV8 242 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 SETMARQ53H47 684 aaPredicted RBP4.37□□□□□ -1.71
SMC4-224ENST00000494612 SOWAHCQ53LP3 525 aaPredicted RBP4.37□□□□□ -1.71
SMC4-224ENST00000494612 C18orf63Q68DL7 685 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 C8orf82Q6P1X6 216 aaPredicted RBP4.37□□□□□ -1.71
SMC4-224ENST00000494612 GSG1LQ6UXU4 331 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 RAD9BQ6WBX8 426 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 KRBA2Q6ZNG9 492 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 TSPAN33Q86UF1 283 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 GPR180Q86V85 440 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 FOXP4Q8IVH2 680 aaPredicted RBP4.37□□□□□ -1.71
SMC4-224ENST00000494612 ARID3BQ8IVW6 561 aaPredicted RBP4.37□□□□□ -1.71
SMC4-224ENST00000494612 CHERPQ8IWX8 916 aaKnown RBP4.37□□□□□ -1.71
SMC4-224ENST00000494612 UTP15Q8TED0 518 aaKnown RBP4.37□□□□□ -1.71
SMC4-224ENST00000494612 FAM216AQ8WUB2 273 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 TANKQ92844 425 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 MOAP1Q96BY2 351 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 ERP27Q96DN0 273 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 GCNAQ96QF7 691 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 FIZ1Q96SL8 496 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 CDRT15Q96T59 188 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 APOL6Q9BWW8 343 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 LRRC4Q9HBW1 653 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 POLG2Q9UHN1 485 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 DBNLQ9UJU6 430 aaKnown RBP4.37□□□□□ -1.71
SMC4-224ENST00000494612 FBXL2Q9UKC9 423 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 ACSL5Q9ULC5 683 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 PADI1Q9ULC6 663 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 NFS1Q9Y697 457 aa4.37□□□□□ -1.71
SMC4-224ENST00000494612 PEG3Q9GZU2 1588 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 A0A1W2PR77 199 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 KANSL1LA0AUZ9 987 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 CDRT15L2A8MXV6 281 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 SH2B2O14492 632 aaPredicted RBP4.36□□□□□ -1.71
SMC4-224ENST00000494612 ANKRD28O15084 1053 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 SMAD9O15198 467 aaKnown RBP4.36□□□□□ -1.71
SMC4-224ENST00000494612 MID1O15344 667 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 PAPSS1O43252 624 aaPredicted RBP4.36□□□□□ -1.71
SMC4-224ENST00000494612 ZBTB43O43298 467 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 TIMM44O43615 452 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 PAPSS2O95340 614 aaPredicted RBP4.36□□□□□ -1.71
SMC4-224ENST00000494612 ZBTB11O95625 1053 aaPredicted RBP4.36□□□□□ -1.71
SMC4-224ENST00000494612 ACTN1P12814 892 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 SRCP12931 536 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 HOXA13P31271 388 aaPredicted RBP4.36□□□□□ -1.71
SMC4-224ENST00000494612 MMP14P50281 582 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 PEX5P50542 639 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 CLCNKAP51800 687 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 STAT2P52630 851 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 RAD23BP54727 409 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 BRWD1-AS2P59051 145 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 LTBQ06643 244 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 ZNF155Q12901 538 aaPredicted RBP4.36□□□□□ -1.71
SMC4-224ENST00000494612 OASLQ15646 514 aaKnown RBP4.36□□□□□ -1.71
SMC4-224ENST00000494612 CALCRLQ16602 461 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 NTRK2Q16620 822 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 EFHC1Q5JVL4 640 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 RARS2Q5T160 578 aaKnown RBP4.36□□□□□ -1.71
SMC4-224ENST00000494612 ZNF324BQ6AW86 544 aaPredicted RBP4.36□□□□□ -1.71
SMC4-224ENST00000494612 GPR139Q6DWJ6 353 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 NRROSQ86YC3 692 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 MAP7D3Q8IWC1 876 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 IQCF1Q8N6M8 205 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 EMC1Q8N766 993 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 LSMEM1Q8N8F7 131 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 ZNF114Q8NC26 417 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 OR5R1Q8NH85 324 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 WFIKKN2Q8TEU8 576 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 SLC20A1Q8WUM9 679 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 ZFAND2BQ8WV99 257 aa4.36□□□□□ -1.71
SMC4-224ENST00000494612 SECISBP2LQ93073 1101 aaKnown RBP4.36□□□□□ -1.71
SMC4-224ENST00000494612 TEX12Q9BXU0 123 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms