RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 HAUS5O94927 633 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 SEMA4FO95754 770 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 IGLV3-19P01714 112 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 TRIM49P0CI25 452 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 TRIM49CP0CI26 452 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 JUPP14923 745 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 ZNF20P17024 532 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 TRIM21P19474 475 aaKnown RBP5.32□□□□□ -1.56
PTCD3-219ENST00000494323 HLA-FP30511 346 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 EIF2S3P41091 472 aaKnown RBP5.32□□□□□ -1.56
PTCD3-219ENST00000494323 PIK3CAP42336 1068 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 TKTL1P51854 596 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 ZNF132P52740 706 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 SUMO3P55854 103 aaPredicted RBP5.32□□□□□ -1.56
PTCD3-219ENST00000494323 YWHAGP61981 247 aaKnown RBP eCLIP5.32□□□□□ -1.56
PTCD3-219ENST00000494323 RPS14P62263 151 aaKnown RBP5.32□□□□□ -1.56
PTCD3-219ENST00000494323 SEMG2Q02383 582 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 INCA1Q0VD86 236 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 DNAJC3Q13217 504 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 ICAM4Q14773 271 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 ZRSR2Q15696 482 aaKnown RBP5.32□□□□□ -1.56
PTCD3-219ENST00000494323 SMAD1Q15797 465 aaKnown RBP5.32□□□□□ -1.56
PTCD3-219ENST00000494323 MPPE1Q53F39 396 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 HIBCHQ6NVY1 386 aaPredicted RBP5.32□□□□□ -1.56
PTCD3-219ENST00000494323 RFWD3Q6PCD5 774 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 Q6ZSN1 163 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 CCDC186Q7Z3E2 898 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 TADA2BQ86TJ2 420 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 ADIPOR2Q86V24 386 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 PIGZQ86VD9 579 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 ZC3H3Q8IXZ2 948 aaKnown RBP5.32□□□□□ -1.56
PTCD3-219ENST00000494323 GALNT15Q8N3T1 639 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 ZNF808Q8N4W9 903 aaPredicted RBP5.32□□□□□ -1.56
PTCD3-219ENST00000494323 ZNF276Q8N554 614 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 NKAPQ8N5F7 415 aaKnown RBP5.32□□□□□ -1.56
PTCD3-219ENST00000494323 KIAA0895Q8NCT3 520 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 ACRBPQ8NEB7 543 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 GOLGA5Q8TBA6 731 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 SEMA4DQ92854 862 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 EEF2KMTQ96G04 330 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 PAGE5Q96GU1 130 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 C1QTNF3Q9BXJ4 246 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 KRTAP3-1Q9BYR8 98 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 SLC2A11Q9BYW1 496 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 VPS11Q9H270 941 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 LHX5Q9H2C1 402 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 TMEM245Q9H330 911 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 EBF2Q9HAK2 575 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 CYP3A43Q9HB55 503 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 ABCB8Q9NUT2 735 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 PIH1D1Q9NWS0 290 aaKnown RBP5.32□□□□□ -1.56
PTCD3-219ENST00000494323 JKAMPQ9P055 326 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 ST6GALNAC2Q9UJ37 374 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 CDC23Q9UJX2 597 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 ZDHHC8Q9ULC8 765 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 FRMD4BQ9Y2L6 1034 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 TCAF1Q9Y4C2 921 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 RAI2Q9Y5P3 530 aa5.32□□□□□ -1.56
PTCD3-219ENST00000494323 MORC2Q9Y6X9 1032 aaPredicted RBP5.32□□□□□ -1.56
PTCD3-219ENST00000494323 SMG1Q96Q15 3661 aaKnown RBP5.32□□□□□ -1.56
PTCD3-219ENST00000494323 A0A087WV48 116 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 A0A087WV62 115 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 A0A1B0GVL5 298 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 MSI1O43347 362 aaKnown RBP5.31□□□□□ -1.56
PTCD3-219ENST00000494323 CALUO43852 315 aaPredicted RBP5.31□□□□□ -1.56
PTCD3-219ENST00000494323 TBL1XO60907 577 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 ABHD16AO95870 558 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 DNTTP04053 509 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 WNT1P04628 370 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 HK1P19367 917 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 CD27P26842 260 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 HOXD9P28356 352 aaPredicted RBP5.31□□□□□ -1.56
PTCD3-219ENST00000494323 CD70P32970 193 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 HALP42357 657 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 GRK6P43250 576 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 HARS2P49590 506 aaKnown RBP5.31□□□□□ -1.56
PTCD3-219ENST00000494323 MAN2A2P49641 1150 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 NUMBP49757 651 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 SELENOPP49908 381 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 SGSHP51688 502 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 BCAT1P54687 386 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 RAD23BP54727 409 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 GALCP54803 685 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 C21orf59P57076 290 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 KLHDC7AQ5VTJ3 777 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 BSPRYQ5W0U4 402 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 RESP18Q5W5W9 173 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 PM20D1Q6GTS8 502 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 TMPRSS12Q86WS5 348 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 PDSS2Q86YH6 399 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 CEP57L1Q8IYX8 460 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 CPXM2Q8N436 756 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 EID2Q8N6I1 236 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 FITM2Q8N6M3 262 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 ANKRD52Q8NB46 1076 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 SLC4A11Q8NBS3 891 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 CCDC150Q8NCX0 1101 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 UBA3Q8TBC4 463 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 WFDC5Q8TCV5 224 aa5.31□□□□□ -1.56
PTCD3-219ENST00000494323 DVL3Q92997 716 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms