RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 SPOCD1Q6ZMY3 1216 aa13.24□□□□□ -0.29
CTDSP1-212ENST00000494067 TMC3Q7Z5M5 1100 aa13.24□□□□□ -0.29
CTDSP1-212ENST00000494067 FAM129CQ86XR2 697 aa13.24□□□□□ -0.29
CTDSP1-212ENST00000494067 TRAM1L1Q8N609 369 aa13.24□□□□□ -0.29
CTDSP1-212ENST00000494067 TFB1MQ8WVM0 346 aaKnown RBP13.24□□□□□ -0.29
CTDSP1-212ENST00000494067 HAUS1Q96CS2 278 aa13.24□□□□□ -0.29
CTDSP1-212ENST00000494067 GORASP1Q9BQQ3 440 aa13.24□□□□□ -0.29
CTDSP1-212ENST00000494067 DDA1Q9BW61 102 aa13.24□□□□□ -0.29
CTDSP1-212ENST00000494067 EPB41L1Q9H4G0 881 aa13.24□□□□□ -0.29
CTDSP1-212ENST00000494067 C10orf88Q9H8K7 445 aa13.24□□□□□ -0.29
CTDSP1-212ENST00000494067 GLOD4Q9HC38 313 aa13.24□□□□□ -0.29
CTDSP1-212ENST00000494067 LUC7LQ9NQ29 371 aaKnown RBP13.24□□□□□ -0.29
CTDSP1-212ENST00000494067 SLC39A1Q9NY26 324 aa13.24□□□□□ -0.29
CTDSP1-212ENST00000494067 ATXN10Q9UBB4 475 aa13.24□□□□□ -0.29
CTDSP1-212ENST00000494067 SLC23A2Q9UGH3 650 aa13.24□□□□□ -0.29
CTDSP1-212ENST00000494067 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.24□□□□□ -0.29
CTDSP1-212ENST00000494067 ZNF711Q9Y462 761 aa13.24□□□□□ -0.29
CTDSP1-212ENST00000494067 PCDHGA3Q9Y5H0 932 aa13.24□□□□□ -0.29
CTDSP1-212ENST00000494067 ZNF106Q9H2Y7 1883 aaKnown RBP13.24□□□□□ -0.29
CTDSP1-212ENST00000494067 GCN1Q92616 2671 aaKnown RBP13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 hCG_1818297A0A087WSY0 165 aa13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 GPR39O43194 453 aa13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 CST8O60676 142 aa13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 MTX2O75431 263 aa13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 NDST3O95803 873 aa13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 THRAP10827 490 aa13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 FGF3P11487 239 aaPredicted RBP13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 F3P13726 295 aa13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 MAGEA1P43355 309 aa13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 CHRNA4P43681 627 aa13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 MAPK9P45984 424 aa13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 EPHA4P54764 986 aa13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 DCDC1P59894 354 aa13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 GTF2H3Q13889 308 aa13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 INSCQ1MX18 579 aa13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 TEX44Q53QW1 395 aa13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 SNAP47Q5SQN1 464 aa13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 WDR74Q6RFH5 385 aaPredicted RBP13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 KDELC1Q6UW63 502 aa13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 TRIM48Q8IWZ4 208 aa13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 IL22RA1Q8N6P7 574 aa13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 NCSTNQ92542 709 aa13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 P3H4Q92791 437 aa13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 ART4Q93070 314 aa13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 OXNAD1Q96HP4 312 aaPredicted RBP13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 TEKT5Q96M29 485 aa13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 TTC25Q96NG3 672 aa13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 TEFMQ96QE5 360 aaKnown RBP13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 FERMT1Q9BQL6 677 aa13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 OSGEPL1Q9H4B0 414 aa13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 SCHIP1Q9P0W5 487 aaPredicted RBP13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 REXO2Q9Y3B8 237 aaKnown RBP13.23□□□□□ -0.29
CTDSP1-212ENST00000494067 BSNQ9UPA5 3926 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 PRR19A6NJB7 356 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 EFCAB7A8K855 629 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 A8MU76 341 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 B8ZZF3 427 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 KMOO15229 486 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 PSTPIP1O43586 416 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 VEGFDO43915 354 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 PMPCBO75439 489 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 PLA2G2AP14555 144 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 BPIP17213 487 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 VCLP18206 1134 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 NFKB1P19838 968 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 CLCNKAP51800 687 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 ZDHHC20Q5W0Z9 365 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 MICALCLQ6ZW33 695 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 ADGRG6Q86SQ4 1221 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 VASH2Q86V25 355 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 LRRTM4Q86VH4 590 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 DTX1Q86Y01 620 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 PLXDC1Q8IUK5 500 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 GDAP1Q8TB36 358 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 GLYATL1Q969I3 302 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 VAT1Q99536 393 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 ZPBPQ9BS86 351 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 FAM117AQ9C073 453 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 RBSNQ9H1K0 784 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 OR2AG1Q9H205 316 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 BPIFA1Q9NP55 256 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 KLC4Q9NSK0 619 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 PCDHA13Q9Y5I0 950 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 HEMK1Q9Y5R4 338 aaPredicted RBP13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 DUSP10Q9Y6W6 482 aa13.22□□□□□ -0.29
CTDSP1-212ENST00000494067 A0A0U1RQJ8 604 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 SOWAHDA6NJG2 315 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 B4E171 279 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 J3QKU1 62 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 ZRANB2O95218 330 aaKnown RBP eCLIP13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 VIPP01282 170 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 TSPAN7P41732 249 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 OLIG2Q13516 323 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 SPA17Q15506 151 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 PLA2G4EQ3MJ16 856 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 TFDP3Q5H9I0 405 aa13.21□□□□□ -0.29
CTDSP1-212ENST00000494067 AADACL2Q6P093 401 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms