RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 MERTKQ12866 999 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 TUBA3CQ13748 450 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 TRIM71Q2Q1W2 868 aaKnown RBP11.41□□□□□ -0.58
RFC4-214ENST00000494047 SLC39A12Q504Y0 691 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 XKR7Q5GH72 579 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 LYPLAL1Q5VWZ2 237 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 CNKSR3Q6P9H4 555 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 IYDQ6PHW0 289 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 LINC00299Q6ZSB3 139 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 METTL3Q86U44 580 aaKnown RBP11.41□□□□□ -0.58
RFC4-214ENST00000494047 ZNF598Q86UK7 904 aaKnown RBP11.41□□□□□ -0.58
RFC4-214ENST00000494047 TET1Q8NFU7 2136 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 B4GALNT2Q8NHY0 566 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 HMGCLL1Q8TB92 370 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 GIPC2Q8TF65 315 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 FBXO32Q969P5 355 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 MARK4Q96L34 752 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 MAGEB10Q96LZ2 347 aaPredicted RBP11.41□□□□□ -0.58
RFC4-214ENST00000494047 RPRD1AQ96P16 312 aaPredicted RBP11.41□□□□□ -0.58
RFC4-214ENST00000494047 FAM193BQ96PV7 902 aaPredicted RBP11.41□□□□□ -0.58
RFC4-214ENST00000494047 TMEM209Q96SK2 561 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 SEMA3CQ99985 751 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 KCTD14Q9BQ13 255 aaPredicted RBP11.41□□□□□ -0.58
RFC4-214ENST00000494047 CINPQ9BW66 212 aaPredicted RBP11.41□□□□□ -0.58
RFC4-214ENST00000494047 OSBPL6Q9BZF3 934 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.41□□□□□ -0.58
RFC4-214ENST00000494047 SMPD3Q9NY59 655 aaPredicted RBP11.41□□□□□ -0.58
RFC4-214ENST00000494047 MPP6Q9NZW5 540 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 MARCH2Q9P0N8 246 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 GMIPQ9P107 970 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 MSRAQ9UJ68 235 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 TRMT6Q9UJA5 497 aaKnown RBP11.41□□□□□ -0.58
RFC4-214ENST00000494047 FIS1Q9Y3D6 152 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 SZT2Q5T011 3432 aa11.41□□□□□ -0.58
RFC4-214ENST00000494047 ABHD14A-ACY1A0A1B0GW23 586 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 CCDC78A2IDD5 438 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 NEMP2A6NFY4 417 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 ARNTLO00327 626 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 ARPC2O15144 300 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 HOXA2O43364 376 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 SLC22A3O75751 556 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 LATS1O95835 1130 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 SLC6A2P23975 617 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 GMPRP36959 345 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 CAPGP40121 348 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 THPOP40225 353 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 CCR10P46092 362 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 ZNF140P52738 457 aaPredicted RBP11.4□□□□□ -0.59
RFC4-214ENST00000494047 CDKN2DP55273 166 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 IL2P60568 153 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 CDKL1Q00532 357 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 DSC2Q02487 901 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 BIRC2Q13490 618 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 NFYCQ13952 458 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 PFKFB4Q16877 469 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 MYLK3Q32MK0 819 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 SLC36A3Q495N2 470 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 ATP6AP1LQ52LC2 224 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 FBXL22Q6P050 247 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 SLC24A5Q71RS6 500 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 OTOP2Q7RTS6 562 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 DEFB128Q7Z7B8 93 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 PHYKPLQ8IUZ5 450 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 SLC15A3Q8IY34 581 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 DHRSXQ8N5I4 330 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 EFCAB3Q8N7B9 438 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 RNF148Q8N7C7 305 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 OR8J3Q8NGG0 315 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 SHKBP1Q8TBC3 707 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 BLOC1S5Q8TDH9 187 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 PPP1R13LQ8WUF5 828 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 ANKRD49Q8WVL7 239 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 EZH1Q92800 747 aaPredicted RBP11.4□□□□□ -0.59
RFC4-214ENST00000494047 LPPQ93052 612 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 PSMG2Q969U7 264 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 PLD4Q96BZ4 506 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 ZNF419Q96HQ0 510 aaPredicted RBP11.4□□□□□ -0.59
RFC4-214ENST00000494047 CDKN2AIPNLQ96HQ2 116 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 PPP3R2Q96LZ3 170 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 CCDC115Q96NT0 180 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 PLEKHG4BQ96PX9 1271 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 ZBTB18Q99592 522 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 ADAM2Q99965 735 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 BCL7BQ9BQE9 202 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 ELAC1Q9H777 363 aaKnown RBP11.4□□□□□ -0.59
RFC4-214ENST00000494047 CAAP1Q9H8G2 361 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 PDFQ9HBH1 243 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 RNF19AQ9NV58 838 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 TMLHEQ9NVH6 421 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 POLR3BQ9NW08 1133 aaPredicted RBP11.4□□□□□ -0.59
RFC4-214ENST00000494047 ABI2Q9NYB9 513 aaPredicted RBP11.4□□□□□ -0.59
RFC4-214ENST00000494047 UBA2Q9UBT2 640 aaPredicted RBP11.4□□□□□ -0.59
RFC4-214ENST00000494047 ZNHIT2Q9UHR6 403 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 PACSIN3Q9UKS6 424 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 CDH7Q9ULB5 785 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 ZNF711Q9Y462 761 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 PCDHA9Q9Y5H5 950 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 GPR45Q9Y5Y3 372 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 CEPT1Q9Y6K0 416 aa11.4□□□□□ -0.59
RFC4-214ENST00000494047 CXorf51AA0A1B0GTR3 108 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms