RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 E5RI56 91 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 SLC9A3R1O14745 358 aaPredicted RBP10.55□□□□□ -0.72
CLCN6-208ENST00000494028 BNIP3LO60238 219 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 TM7SF2O76062 418 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 SUPT7LO94864 414 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 CDK14O94921 469 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 CHRM1P11229 460 aaPredicted RBP10.55□□□□□ -0.72
CLCN6-208ENST00000494028 ADH5P11766 374 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 CD1EP15812 388 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 ZNF7P17097 686 aaPredicted RBP10.55□□□□□ -0.72
CLCN6-208ENST00000494028 WEE1P30291 646 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 MXRA7P84157 204 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 SEMG2Q02383 582 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 CUL3Q13618 768 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 KPNB1Q14974 876 aaKnown RBP10.55□□□□□ -0.72
CLCN6-208ENST00000494028 DUSP6Q16828 381 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 PFKFB4Q16877 469 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 LRRC73Q5JTD7 316 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 LYPLAL1Q5VWZ2 237 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 KANK2Q63ZY3 851 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 CLEC6AQ6EIG7 209 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 CHSY3Q70JA7 882 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 SNX32Q86XE0 403 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 NPAS3Q8IXF0 933 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 PLPP6Q8IY26 295 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 NXPE1Q8N323 547 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 KIAA1958Q8N8K9 716 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 ENDOVQ8N8Q3 282 aaKnown RBP10.55□□□□□ -0.72
CLCN6-208ENST00000494028 GPR26Q8NDV2 337 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 VN1R2Q8NFZ6 395 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 OR2A12Q8NGT7 310 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 HMGCLL1Q8TB92 370 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 STAG3L4Q8TBR4 150 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 ACTRT2Q8TDY3 377 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 WFIKKN2Q8TEU8 576 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 CYB5D2Q8WUJ1 264 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 NAT14Q8WUY8 206 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 CMTM5Q96DZ9 223 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 SCRN2Q96FV2 425 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 FAM161BQ96MY7 647 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 ZNF641Q96N77 438 aaPredicted RBP10.55□□□□□ -0.72
CLCN6-208ENST00000494028 LRRC3BQ96PB8 259 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 PLEKHG4BQ96PX9 1271 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 ASB2Q96Q27 587 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 HTATIP2Q9BUP3 242 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 CLPBQ9H078 707 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 ASB8Q9H765 288 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 NUDT4Q9NZJ9 180 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 B4GALT6Q9UBX8 382 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 SLCO3A1Q9UIG8 710 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 CRLS1Q9UJA2 301 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 FBXO10Q9UK96 956 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 PCTPQ9UKL6 214 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 TMCO1Q9UM00 188 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 DHRS7Q9Y394 339 aa10.55□□□□□ -0.72
CLCN6-208ENST00000494028 ANKRD12Q6UB98 2062 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 A0A1W2PQ67 120 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 POP4O95707 220 aaKnown RBP10.54□□□□□ -0.72
CLCN6-208ENST00000494028 CCND1P24385 295 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 ADSLP30566 484 aaPredicted RBP10.54□□□□□ -0.72
CLCN6-208ENST00000494028 VASPP50552 380 aaPredicted RBP10.54□□□□□ -0.72
CLCN6-208ENST00000494028 CDH13P55290 713 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 IL2P60568 153 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 SLC25A3Q00325 362 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 LCP2Q13094 533 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 SQLEQ14534 574 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 CBX2Q14781 532 aaPredicted RBP10.54□□□□□ -0.72
CLCN6-208ENST00000494028 DHCR24Q15392 516 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 PPP1R3AQ16821 1122 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 GAB4Q2WGN9 574 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 EML3Q32P44 896 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 GPR33Q49SQ1 333 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 ACSBG2Q5FVE4 666 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 NXNQ6DKJ4 435 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 PTRHD1Q6GMV3 140 aaKnown RBP10.54□□□□□ -0.72
CLCN6-208ENST00000494028 UGT3A1Q6NUS8 523 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 GDPD4Q6W3E5 623 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 MACC1Q6ZN28 852 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 RFLNAQ6ZTI6 216 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 RBM23Q86U06 439 aaKnown RBP10.54□□□□□ -0.72
CLCN6-208ENST00000494028 SCUBE1Q8IWY4 988 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 CELF5Q8N6W0 485 aaKnown RBP10.54□□□□□ -0.72
CLCN6-208ENST00000494028 C12orf76Q8N812 135 aaPredicted RBP10.54□□□□□ -0.72
CLCN6-208ENST00000494028 GDPD5Q8WTR4 605 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 EEF1AKMT1Q8WVE0 214 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 WDR60Q8WVS4 1066 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 SORCS1Q8WY21 1168 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 PBXIP1Q96AQ6 731 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 C19orf60Q96EN9 201 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 CLPTM1LQ96KA5 538 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 KLHL32Q96NJ5 620 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 LBHD1Q9BQE6 289 aaPredicted RBP10.54□□□□□ -0.72
CLCN6-208ENST00000494028 RTKNQ9BST9 563 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 SFXN1Q9H9B4 322 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 ZBTB26Q9HCK0 441 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 SARS2Q9NP81 518 aaKnown RBP10.54□□□□□ -0.72
CLCN6-208ENST00000494028 NFKBIL1Q9UBC1 381 aaPredicted RBP10.54□□□□□ -0.72
CLCN6-208ENST00000494028 NKX1-2Q9UD57 310 aaPredicted RBP10.54□□□□□ -0.72
CLCN6-208ENST00000494028 SLC7A8Q9UHI5 535 aa10.54□□□□□ -0.72
CLCN6-208ENST00000494028 DPP7Q9UHL4 492 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms