RNA–Protein interactions for RNA: ENST00000492980.1

CCDC88B-208, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 5

Gene CCDC88B, Length 2,118 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-208ENST00000492980 CFLARO15519 480 aa20.91■□□□□ 0.94
CCDC88B-208ENST00000492980 MAP3K7O43318 606 aa20.91■□□□□ 0.94
CCDC88B-208ENST00000492980 ALDOCP09972 364 aaKnown RBP20.91■□□□□ 0.94
CCDC88B-208ENST00000492980 HLA-FP30511 346 aa20.91■□□□□ 0.94
CCDC88B-208ENST00000492980 AGTR2P50052 363 aa20.91■□□□□ 0.94
CCDC88B-208ENST00000492980 TRIM68Q6AZZ1 485 aa20.91■□□□□ 0.94
CCDC88B-208ENST00000492980 FBXO46Q6PJ61 603 aaPredicted RBP20.91■□□□□ 0.94
CCDC88B-208ENST00000492980 KBTBD2Q8IY47 623 aa20.91■□□□□ 0.94
CCDC88B-208ENST00000492980 PAF1Q8N7H5 531 aa20.91■□□□□ 0.94
CCDC88B-208ENST00000492980 ZNF483Q8TF39 744 aaPredicted RBP20.91■□□□□ 0.94
CCDC88B-208ENST00000492980 MRPL1Q9BYD6 325 aaKnown RBP20.91■□□□□ 0.94
CCDC88B-208ENST00000492980 TUBB1Q9H4B7 451 aa20.91■□□□□ 0.94
CCDC88B-208ENST00000492980 UTP6Q9NYH9 597 aaKnown RBP20.91■□□□□ 0.94
CCDC88B-208ENST00000492980 DHRS7Q9Y394 339 aa20.91■□□□□ 0.94
CCDC88B-208ENST00000492980 MTCL1Q9Y4B5 1905 aaKnown RBP20.91■□□□□ 0.94
CCDC88B-208ENST00000492980 RPS3P23396 243 aaKnown RBP eCLIP20.9■□□□□ 0.94
CCDC88B-208ENST00000492980 SERPINA4P29622 427 aa20.9■□□□□ 0.94
CCDC88B-208ENST00000492980 NAA20P61599 178 aa20.9■□□□□ 0.94
CCDC88B-208ENST00000492980 STX5Q13190 355 aa20.9■□□□□ 0.94
CCDC88B-208ENST00000492980 CEACAM7Q14002 265 aa20.9■□□□□ 0.94
CCDC88B-208ENST00000492980 FUT11Q495W5 492 aa20.9■□□□□ 0.94
CCDC88B-208ENST00000492980 RNF111Q6ZNA4 994 aa20.9■□□□□ 0.94
CCDC88B-208ENST00000492980 SNX20Q7Z614 316 aa20.9■□□□□ 0.94
CCDC88B-208ENST00000492980 NECAB2Q7Z6G3 386 aa20.9■□□□□ 0.94
CCDC88B-208ENST00000492980 GPSM1Q86YR5 675 aa20.9■□□□□ 0.94
CCDC88B-208ENST00000492980 TCEAL4Q96EI5 215 aa20.9■□□□□ 0.94
CCDC88B-208ENST00000492980 ASB8Q9H765 288 aa20.9■□□□□ 0.94
CCDC88B-208ENST00000492980 IL26Q9NPH9 171 aa20.9■□□□□ 0.94
CCDC88B-208ENST00000492980 CCDC167Q9P0B6 97 aa20.9■□□□□ 0.94
CCDC88B-208ENST00000492980 PCTPQ9UKL6 214 aa20.9■□□□□ 0.94
CCDC88B-208ENST00000492980 TMCO1Q9UM00 188 aa20.9■□□□□ 0.94
CCDC88B-208ENST00000492980 INSL6Q9Y581 213 aa20.9■□□□□ 0.94
CCDC88B-208ENST00000492980 IRAK3Q9Y616 596 aa20.9■□□□□ 0.94
CCDC88B-208ENST00000492980 CXorf51AA0A1B0GTR3 108 aa20.9■□□□□ 0.94
CCDC88B-208ENST00000492980 ZNF7P17097 686 aaPredicted RBP20.9■□□□□ 0.94
CCDC88B-208ENST00000492980 BPIP17213 487 aa20.9■□□□□ 0.94
CCDC88B-208ENST00000492980 PKNOX1P55347 436 aa20.9■□□□□ 0.94
CCDC88B-208ENST00000492980 NFATC2Q13469 925 aa20.9■□□□□ 0.94
CCDC88B-208ENST00000492980 KBTBD6Q86V97 674 aa20.9■□□□□ 0.94
CCDC88B-208ENST00000492980 PHYKPLQ8IUZ5 450 aa20.9■□□□□ 0.94
CCDC88B-208ENST00000492980 SNX31Q8N9S9 440 aa20.9■□□□□ 0.94
CCDC88B-208ENST00000492980 BOCQ9BWV1 1114 aa20.9■□□□□ 0.94
CCDC88B-208ENST00000492980 TRBV5-4A0A0C4DH59 114 aa20.89■□□□□ 0.94
CCDC88B-208ENST00000492980 FBP2O00757 339 aa20.89■□□□□ 0.94
CCDC88B-208ENST00000492980 XRCC1P18887 633 aaPredicted RBP20.89■□□□□ 0.94
CCDC88B-208ENST00000492980 ITGALP20701 1170 aa20.89■□□□□ 0.94
CCDC88B-208ENST00000492980 CLNS1AP54105 237 aaKnown RBP20.89■□□□□ 0.94
CCDC88B-208ENST00000492980 SNRPD1P62314 119 aaKnown RBP20.89■□□□□ 0.94
CCDC88B-208ENST00000492980 PLPP4Q5VZY2 271 aa20.89■□□□□ 0.94
CCDC88B-208ENST00000492980 REP15Q6BDI9 236 aa20.89■□□□□ 0.94
CCDC88B-208ENST00000492980 DHDDSQ86SQ9 333 aa20.89■□□□□ 0.94
CCDC88B-208ENST00000492980 PDLIM5Q96HC4 596 aaKnown RBP20.89■□□□□ 0.94
CCDC88B-208ENST00000492980 CLPBQ9H078 707 aa20.89■□□□□ 0.94
CCDC88B-208ENST00000492980 CACNA2D2Q9NY47 1150 aa20.89■□□□□ 0.94
CCDC88B-208ENST00000492980 APPL1Q9UKG1 709 aa20.89■□□□□ 0.94
CCDC88B-208ENST00000492980 HS3ST2Q9Y278 367 aa20.89■□□□□ 0.94
CCDC88B-208ENST00000492980 SNX2O60749 519 aa20.89■□□□□ 0.93
CCDC88B-208ENST00000492980 SNRPB2P08579 225 aaKnown RBP20.89■□□□□ 0.93
CCDC88B-208ENST00000492980 LRP8Q14114 963 aa20.89■□□□□ 0.93
CCDC88B-208ENST00000492980 PTRHD1Q6GMV3 140 aaKnown RBP20.89■□□□□ 0.93
CCDC88B-208ENST00000492980 ASTLQ6HA08 431 aaPredicted RBP20.89■□□□□ 0.93
CCDC88B-208ENST00000492980 C22orf39Q6P5X5 142 aa20.89■□□□□ 0.93
CCDC88B-208ENST00000492980 TMEM25Q86YD3 366 aa20.89■□□□□ 0.93
CCDC88B-208ENST00000492980 DDIASQ8IXT1 998 aa20.89■□□□□ 0.93
CCDC88B-208ENST00000492980 RBFAQ8N0V3 343 aa20.89■□□□□ 0.93
CCDC88B-208ENST00000492980 OR9I1Q8NGQ6 314 aa20.89■□□□□ 0.93
CCDC88B-208ENST00000492980 LYSMD1Q96S90 227 aa20.89■□□□□ 0.93
CCDC88B-208ENST00000492980 CD274Q9NZQ7 290 aa20.89■□□□□ 0.93
CCDC88B-208ENST00000492980 CXXC1Q9P0U4 656 aaPredicted RBP20.89■□□□□ 0.93
CCDC88B-208ENST00000492980 GIMAP2Q9UG22 337 aa20.89■□□□□ 0.93
CCDC88B-208ENST00000492980 BTRCQ9Y297 605 aa20.89■□□□□ 0.93
CCDC88B-208ENST00000492980 MYOFQ9NZM1 2061 aa20.88■□□□□ 0.93
CCDC88B-208ENST00000492980 GLYATL1P3A0A0U1RQE8 302 aa20.88■□□□□ 0.93
CCDC88B-208ENST00000492980 GOLGA8CPA6NN73 597 aa20.88■□□□□ 0.93
CCDC88B-208ENST00000492980 MOSPD3O75425 235 aa20.88■□□□□ 0.93
CCDC88B-208ENST00000492980 FGBP02675 491 aa20.88■□□□□ 0.93
CCDC88B-208ENST00000492980 GPX3P22352 226 aa20.88■□□□□ 0.93
CCDC88B-208ENST00000492980 ACADVLP49748 655 aa20.88■□□□□ 0.93
CCDC88B-208ENST00000492980 EPHA5P54756 1037 aa20.88■□□□□ 0.93
CCDC88B-208ENST00000492980 TEAD2Q15562 447 aa20.88■□□□□ 0.93
CCDC88B-208ENST00000492980 TGFBIQ15582 683 aa20.88■□□□□ 0.93
CCDC88B-208ENST00000492980 MYLK3Q32MK0 819 aa20.88■□□□□ 0.93
CCDC88B-208ENST00000492980 SYVN1Q86TM6 617 aa20.88■□□□□ 0.93
CCDC88B-208ENST00000492980 TSPAN33Q86UF1 283 aa20.88■□□□□ 0.93
CCDC88B-208ENST00000492980 NAT14Q8WUY8 206 aa20.88■□□□□ 0.93
CCDC88B-208ENST00000492980 ISG20Q96AZ6 181 aaKnown RBP20.88■□□□□ 0.93
CCDC88B-208ENST00000492980 PLEKHG4BQ96PX9 1271 aa20.88■□□□□ 0.93
CCDC88B-208ENST00000492980 ZNF184Q99676 751 aaPredicted RBP20.88■□□□□ 0.93
CCDC88B-208ENST00000492980 GNPTGQ9UJJ9 305 aa20.88■□□□□ 0.93
CCDC88B-208ENST00000492980 ASB1Q9Y576 335 aa20.88■□□□□ 0.93
CCDC88B-208ENST00000492980 PCDHGA7Q9Y5G6 932 aa20.88■□□□□ 0.93
CCDC88B-208ENST00000492980 NPIPB15A6NHN6 443 aaPredicted RBP20.87■□□□□ 0.93
CCDC88B-208ENST00000492980 A8MX80 341 aa20.87■□□□□ 0.93
CCDC88B-208ENST00000492980 H3BNX3 289 aa20.87■□□□□ 0.93
CCDC88B-208ENST00000492980 RFPL2O75678 378 aa20.87■□□□□ 0.93
CCDC88B-208ENST00000492980 ACRV1P26436 265 aa20.87■□□□□ 0.93
CCDC88B-208ENST00000492980 PRDX3P30048 256 aaKnown RBP20.87■□□□□ 0.93
CCDC88B-208ENST00000492980 SPAM1P38567 509 aa20.87■□□□□ 0.93
CCDC88B-208ENST00000492980 STX1BP61266 288 aa20.87■□□□□ 0.93
CCDC88B-208ENST00000492980 PSME3P61289 254 aa20.87■□□□□ 0.93
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