RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-215	ENST00000492451	FKBPL	Q9UIM3	349 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	KCTD3	Q9Y597	815 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	SLC30A1	Q9Y6M5	507 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451		U3KQA8	63 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	BPTF	Q12830	3046 aa		13.66	□□□□□ -0.22
PTPN7-215	ENST00000492451	CPED1	A4D0V7	1026 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	MROH6	A6NGR9	719 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451		H7C0S8	307 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	GAPDHS	O14556	408 aa	Predicted RBP	13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	CHUK	O15111	745 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	UGT1A9	O60656	530 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	UGT1A6	P19224	532 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	TPSB2	P20231	275 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	ITGAL	P20701	1170 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	UGT1A1	P22309	533 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	UGT1A4	P22310	534 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	ADRA1D	P25100	572 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	PSMA3	P25788	255 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	UGT1A3	P35503	534 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	UGT1A5	P35504	534 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	ACTR1B	P42025	376 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	CLDN6	P56747	220 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	ACTR1A	P61163	376 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	TMPRSS15	P98073	1019 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	XIAP	P98170	497 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	TMEM115	Q12893	351 aa	Predicted RBP	13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	GPS1	Q13098	491 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	NFATC2	Q13469	925 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	TPSAB1	Q15661	275 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	SMAD1	Q15797	465 aa	Known RBP	13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	GPR33	Q49SQ1	333 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	CERCAM	Q5T4B2	595 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	SLC30A9	Q6PML9	568 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	DHRS13	Q6UX07	377 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	CHST15	Q7LFX5	561 aa	Predicted RBP	13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	TMPRSS7	Q7RTY8	843 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	EFL1	Q7Z2Z2	1120 aa	Known RBP	13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	LRRTM4	Q86VH4	590 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	TMPRSS12	Q86WS5	348 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	CREG2	Q8IUH2	290 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	KY	Q8NBH2	561 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	GPR156	Q8NFN8	814 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	HEXDC	Q8WVB3	486 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	ULK4	Q96C45	1275 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	ABCG4	Q9H172	646 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	ASB8	Q9H765	288 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	UGT1A7	Q9HAW7	530 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	UGT1A10	Q9HAW8	530 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	UGT1A8	Q9HAW9	530 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	ARFGAP3	Q9NP61	516 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	SPATS2L	Q9NUQ6	558 aa	Known RBP	13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	PIH1D1	Q9NWS0	290 aa	Known RBP	13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	TMPRSS11E	Q9UL52	423 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	RIMKLB	Q9ULI2	386 aa		13.65	□□□□□ -0.22
PTPN7-215	ENST00000492451	PLXNB3	Q9ULL4	1909 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	FAM149A	A5PLN7	773 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	AGAP14	A8MT82	685 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451		B4DGG1	531 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	ECEL1	O95672	775 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	RALB	P11234	206 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	MYF5	P13349	255 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	ACP5	P13686	325 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	VCL	P18206	1134 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	AK4	P27144	223 aa	Predicted RBP	13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	CASQ1	P31415	396 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	GRIA1	P42261	906 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	MAGEA6	P43360	314 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	NPY2R	P49146	381 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	ETF1	P62495	437 aa	Known RBP	13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	TRIP13	Q15645	432 aa	Predicted RBP	13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	C14orf28	Q4W4Y0	310 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	ZNF648	Q5T619	568 aa	Predicted RBP	13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	GPRC6A	Q5T6X5	926 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	GUSBP11	Q6P575	273 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	SNX20	Q7Z614	316 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	PPHLN1	Q8NEY8	458 aa	Known RBP	13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	WDR48	Q8TAF3	677 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	ZDHHC1	Q8WTX9	485 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	ZCCHC14	Q8WYQ9	949 aa	Known RBP	13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	PEX13	Q92968	403 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	ZNF514	Q96K75	400 aa	Predicted RBP	13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	DNAJC1	Q96KC8	554 aa	Known RBP	13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	CAPZA3	Q96KX2	299 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	RUNDC3B	Q96NL0	473 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	TIMM29	Q9BSF4	260 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	BFAR	Q9NZS9	450 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	CRLS1	Q9UJA2	301 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	NEU2	Q9Y3R4	380 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	PRKAB1	Q9Y478	270 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	CHD6	Q8TD26	2715 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	MYLK	Q15746	1914 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	FREM2	Q5SZK8	3169 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	DMXL2	Q8TDJ6	3036 aa		13.64	□□□□□ -0.23
PTPN7-215	ENST00000492451	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	ZFC3H1	O60293	1989 aa	Known RBP	13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	CCDC188	H7C350	402 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	ZW10	O43264	779 aa		13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	NUDT21	O43809	227 aa	Known RBP	13.63	□□□□□ -0.23
PTPN7-215	ENST00000492451	OPA1	O60313	960 aa		13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms