RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 ZNF184Q99676 751 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-219ENST00000491747 MYOCQ99972 504 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 ANGPTL2Q9UKU9 493 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 PCDHGC4Q9Y5F7 938 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 SNX11Q9Y5W9 270 aa9.38□□□□□ -0.91
BRCA1-219ENST00000491747 IGLON5A6NGN9 336 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 F8W8V4 182 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 KCNK1O00180 336 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 FCHO1O14526 889 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 SLC30A4O14863 429 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 RAD51BO15315 384 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 MAGEC1O60732 1142 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 PIAS1O75925 651 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 HLA-DQB2P05538 268 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 ID4P47928 161 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 AFF3P51826 1226 aaKnown RBP9.37□□□□□ -0.91
BRCA1-219ENST00000491747 RAP1GDS1P52306 607 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 RACK1P63244 317 aaKnown RBP9.37□□□□□ -0.91
BRCA1-219ENST00000491747 SLC18A2Q05940 514 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 BCL2L1Q07817 233 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 TRAF2Q12933 501 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 ZBTB17Q13105 803 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 PTPRRQ15256 657 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 UGP2Q16851 508 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 OR52E8Q6IFG1 317 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 RINLQ6ZS11 566 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.37□□□□□ -0.91
BRCA1-219ENST00000491747 CNTD1Q8N815 330 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 HCAR2Q8TDS4 363 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 NRG4Q8WWG1 115 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 SLC44A1Q8WWI5 657 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 FATE1Q969F0 183 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 RAB7BQ96AH8 199 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 ZNF641Q96N77 438 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-219ENST00000491747 WDR83Q9BRX9 315 aaKnown RBP9.37□□□□□ -0.91
BRCA1-219ENST00000491747 CEP41Q9BYV8 373 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 C12orf65Q9H3J6 166 aaKnown RBP9.37□□□□□ -0.91
BRCA1-219ENST00000491747 ATP13A3Q9H7F0 1226 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 CAAP1Q9H8G2 361 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 TMEM9BQ9NQ34 198 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 SCUBE2Q9NQ36 999 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 RBM22Q9NW64 420 aaKnown RBP eCLIP9.37□□□□□ -0.91
BRCA1-219ENST00000491747 KCNK4Q9NYG8 393 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 CDV3Q9UKY7 258 aaKnown RBP9.37□□□□□ -0.91
BRCA1-219ENST00000491747 CHMP2BQ9UQN3 213 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 ANKRD6Q9Y2G4 727 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 SPTBN4Q9H254 2564 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 CEP250Q9BV73 2442 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 TCRBV9S1A1TA0A576 114 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 DCDC2BA2VCK2 349 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 H0Y8X5 98 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 MMP20O60882 483 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 TMEM63AO94886 807 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 PAK4O96013 591 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-219ENST00000491747 MX2P20592 715 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 BGNP21810 368 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 CD38P28907 300 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 SERPINA4P29622 427 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 GRIA4P48058 902 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 SERPINB4P48594 390 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 AP1S1P61966 158 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 DSC2Q02487 901 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 NIPAL4Q0D2K0 466 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 THOC5Q13769 683 aaKnown RBP9.37□□□□□ -0.91
BRCA1-219ENST00000491747 GRM3Q14832 879 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 PRAMEF14Q5SWL7 426 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 NAPEPLDQ6IQ20 393 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 TIGD7Q6NT04 549 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-219ENST00000491747 TMEM145Q8NBT3 493 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 ARRDC2Q8TBH0 407 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 DTX3LQ8TDB6 740 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 WDR60Q8WVS4 1066 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 FEM1CQ96JP0 617 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 IL12RB2Q99665 862 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 SEMA3CQ99985 751 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 SLC17A9Q9BYT1 436 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 PCDH12Q9NPG4 1184 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 AASDHPPTQ9NRN7 309 aa9.37□□□□□ -0.91
BRCA1-219ENST00000491747 ASCC3Q8N3C0 2202 aaKnown RBP9.37□□□□□ -0.91
BRCA1-219ENST00000491747 UPK3BL1B0FP48 263 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 UPK3BL2E5RIL1 263 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 APOC4-APOC2K7ER74 178 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 COPEO14579 308 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 VILLO15195 856 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 HTRA2O43464 458 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-219ENST00000491747 TSPAN6O43657 245 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 CIB2O75838 187 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 JCHAINP01591 159 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 APOC2P02655 101 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 SYPP08247 313 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 PYGBP11216 843 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 ZFXP17010 805 aaPredicted RBP9.36□□□□□ -0.91
BRCA1-219ENST00000491747 CTSKP43235 329 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 CLDN2P57739 230 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 RPS21P63220 83 aaKnown RBP9.36□□□□□ -0.91
BRCA1-219ENST00000491747 ITKQ08881 620 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 HLA-BQ31612 363 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 TRMT5Q32P41 509 aaKnown RBP9.36□□□□□ -0.91
BRCA1-219ENST00000491747 UAP1L1Q3KQV9 507 aa9.36□□□□□ -0.91
BRCA1-219ENST00000491747 KBTBD12Q3ZCT8 623 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms