RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 AQP4P55087 323 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 ST8SIA6P61647 398 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 GRSF1Q12849 480 aaKnown RBP eCLIP22.61■■□□□ 1.21
USF3-203ENST00000491165 CDH17Q12864 832 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 MSLNQ13421 630 aaPredicted RBP22.61■■□□□ 1.21
USF3-203ENST00000491165 GRM3Q14832 879 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 SEL1L3Q68CR1 1132 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 CWF19L1Q69YN2 538 aaKnown RBP22.61■■□□□ 1.21
USF3-203ENST00000491165 METTL3Q86U44 580 aaKnown RBP22.61■■□□□ 1.21
USF3-203ENST00000491165 ZNF687Q8N1G0 1237 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 ZFAND2BQ8WV99 257 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 PRPF19Q9UMS4 504 aaKnown RBP22.61■■□□□ 1.21
USF3-203ENST00000491165 WDFY4Q6ZS81 3184 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 GOLGA8QA0A0J9YX86 632 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 GOLGA8OA6NCC3 632 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 GOLGA8NF8WBI6 632 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 CTSLP07711 333 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 HNRNPLP14866 589 aaKnown RBP eCLIP22.61■■□□□ 1.21
USF3-203ENST00000491165 DRD1P21728 446 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 PIK3R1P27986 724 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 NMBRP28336 390 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 CSRP3P50461 194 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 ENPP2Q13822 863 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 PRPSAP1Q14558 356 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 HNRNPA1L2Q32P51 320 aaKnown RBP22.61■■□□□ 1.21
USF3-203ENST00000491165 CARD16Q5EG05 197 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 NAPEPLDQ6IQ20 393 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 C16orf89Q6UX73 402 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 CAMK1DQ8IU85 385 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 CHPFQ8IZ52 775 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 ST13P4Q8IZP2 240 aaPredicted RBP22.61■■□□□ 1.21
USF3-203ENST00000491165 IL17RCQ8NAC3 791 aa22.61■■□□□ 1.21
USF3-203ENST00000491165 POLR3BQ9NW08 1133 aaPredicted RBP22.61■■□□□ 1.21
USF3-203ENST00000491165 H3BNX3 289 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 GOLGA8TH3BQL2 631 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 TK2O00142 265 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 ADRA1AP35348 466 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 CHRNA4P43681 627 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 GRIA4P48058 902 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 NUDT2P50583 147 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 WNT3AP56704 352 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 SNRPD1P62314 119 aaKnown RBP22.6■■□□□ 1.21
USF3-203ENST00000491165 TRAF2Q12933 501 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 C9orf64Q5T6V5 341 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 RYBPQ8N488 228 aaPredicted RBP22.6■■□□□ 1.21
USF3-203ENST00000491165 SERPINI1Q99574 410 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 C1QTNF1Q9BXJ1 281 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 RHOJQ9H4E5 214 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 WDR55Q9H6Y2 383 aaPredicted RBP22.6■■□□□ 1.21
USF3-203ENST00000491165 STON1Q9Y6Q2 735 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 RGSL1A5PLK6 1076 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 NEMP1O14524 444 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 AIM2O14862 343 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 PEX1O43933 1283 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 ADAM23O75077 832 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 IGSF6O95976 241 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 SERPINF2P08697 491 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 POLE2P56282 527 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 RPL26P61254 145 aaKnown RBP22.6■■□□□ 1.21
USF3-203ENST00000491165 PKN3Q6P5Z2 889 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 NUDT18Q6ZVK8 323 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 LCA5Q86VQ0 697 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 ZC3HC1Q86WB0 502 aaKnown RBP22.6■■□□□ 1.21
USF3-203ENST00000491165 SNX32Q86XE0 403 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 SMIM14Q96QK8 99 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 CENPKQ9BS16 269 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 WNT16Q9UBV4 365 aa22.6■■□□□ 1.21
USF3-203ENST00000491165 AAR2Q9Y312 384 aaKnown RBP22.6■■□□□ 1.21
USF3-203ENST00000491165 SLC22A2O15244 555 aa22.59■■□□□ 1.21
USF3-203ENST00000491165 ANXA9O76027 345 aa22.59■■□□□ 1.21
USF3-203ENST00000491165 PRLP01236 227 aa22.59■■□□□ 1.21
USF3-203ENST00000491165 SATB1Q01826 763 aa22.59■■□□□ 1.21
USF3-203ENST00000491165 PRKAA1Q13131 559 aa22.59■■□□□ 1.21
USF3-203ENST00000491165 USP10Q14694 798 aaKnown RBP22.59■■□□□ 1.21
USF3-203ENST00000491165 MYLK3Q32MK0 819 aa22.59■■□□□ 1.21
USF3-203ENST00000491165 LSM12Q3MHD2 195 aaKnown RBP22.59■■□□□ 1.21
USF3-203ENST00000491165 SDCCAG8Q86SQ7 713 aaPredicted RBP22.59■■□□□ 1.21
USF3-203ENST00000491165 LINC00523Q86TU6 105 aa22.59■■□□□ 1.21
USF3-203ENST00000491165 SIX5Q8N196 739 aa22.59■■□□□ 1.21
USF3-203ENST00000491165 KDM1BQ8NB78 822 aa22.59■■□□□ 1.21
USF3-203ENST00000491165 KYQ8NBH2 561 aa22.59■■□□□ 1.21
USF3-203ENST00000491165 GRIN3AQ8TCU5 1115 aa22.59■■□□□ 1.21
USF3-203ENST00000491165 KIFC1Q9BW19 673 aa22.59■■□□□ 1.21
USF3-203ENST00000491165 TDRD1Q9BXT4 1180 aaKnown RBP22.59■■□□□ 1.21
USF3-203ENST00000491165 ZDHHC6Q9H6R6 413 aa22.59■■□□□ 1.21
USF3-203ENST00000491165 EPHX1P07099 455 aa22.58■■□□□ 1.21
USF3-203ENST00000491165 PIM1P11309 404 aaPredicted RBP22.58■■□□□ 1.21
USF3-203ENST00000491165 VCLP18206 1134 aa22.58■■□□□ 1.21
USF3-203ENST00000491165 SAT1P21673 171 aa22.58■■□□□ 1.21
USF3-203ENST00000491165 METAP1P53582 386 aa22.58■■□□□ 1.21
USF3-203ENST00000491165 ARL13AQ5H913 290 aaPredicted RBP22.58■■□□□ 1.21
USF3-203ENST00000491165 DENND5AQ6IQ26 1287 aa22.58■■□□□ 1.21
USF3-203ENST00000491165 Q6ZS52 159 aa22.58■■□□□ 1.21
USF3-203ENST00000491165 ZSWIM9Q86XI8 627 aa22.58■■□□□ 1.21
USF3-203ENST00000491165 TMEM151AQ8N4L1 468 aa22.58■■□□□ 1.21
USF3-203ENST00000491165 RP9Q8TA86 221 aaKnown RBP22.58■■□□□ 1.21
USF3-203ENST00000491165 MSANTD3Q96H12 275 aa22.58■■□□□ 1.21
USF3-203ENST00000491165 SCYL1Q96KG9 808 aa22.58■■□□□ 1.21
USF3-203ENST00000491165 TRIB3Q96RU7 358 aa22.58■■□□□ 1.21
USF3-203ENST00000491165 FICDQ9BVA6 458 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms