RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-223ENST00000490833 ERVK-8P63133 956 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 CDKL1Q00532 357 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 GSTM4Q03013 218 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 EMX2Q04743 252 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 LRRC74AQ0VAA2 488 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 PRKG2Q13237 762 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 CDH18Q13634 790 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 KCNC3Q14003 757 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 LRP8Q14114 963 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 ADGRE1Q14246 886 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 GRM2Q14416 872 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 PDCD2Q16342 344 aaPredicted RBP6.29□□□□□ -1.4
FN1-223ENST00000490833 PFKFB4Q16877 469 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 GRAMD1BQ3KR37 738 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 ATP6AP1LQ52LC2 224 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 PDCD4Q53EL6 469 aaKnown RBP6.29□□□□□ -1.4
FN1-223ENST00000490833 VWA5B1Q5TIE3 1220 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 CES4AQ5XG92 561 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 SULT1C3Q6IMI6 304 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 NCEH1Q6PIU2 408 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 HTR3DQ70Z44 454 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 FRA10AC1Q70Z53 315 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 KDELC2Q7Z4H8 507 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 SNX20Q7Z614 316 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 SPATA24Q86W54 205 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 HPS6Q86YV9 775 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 DENND1CQ8IV53 801 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 FAM217AQ8IXS0 508 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 RNF168Q8IYW5 571 aaPredicted RBP6.29□□□□□ -1.4
FN1-223ENST00000490833 TBC1D21Q8IYX1 336 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 AHI1Q8N157 1196 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 POU5F2Q8N7G0 328 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 PAF1Q8N7H5 531 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 PTGR2Q8N8N7 351 aaPredicted RBP6.29□□□□□ -1.4
FN1-223ENST00000490833 OR4K2Q8NGD2 314 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 LPGAT1Q92604 370 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 EME1Q96AY2 570 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 TUBGCP3Q96CW5 907 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 RCN3Q96D15 328 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 OTUB2Q96DC9 234 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 DGCR14Q96DF8 476 aaKnown RBP6.29□□□□□ -1.4
FN1-223ENST00000490833 PHF21BQ96EK2 531 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 LRIG1Q96JA1 1093 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 DNAJC1Q96KC8 554 aaKnown RBP6.29□□□□□ -1.4
FN1-223ENST00000490833 CATSPER2Q96P56 530 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 PGLYRP2Q96PD5 576 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 ATOH8Q96SQ7 321 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 HGH1Q9BTY7 390 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 HTATIP2Q9BUP3 242 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 BDH2Q9BUT1 245 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 C9orf16Q9BUW7 83 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 HERC2P3Q9BVR0 1158 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 KLF16Q9BXK1 252 aaPredicted RBP6.29□□□□□ -1.4
FN1-223ENST00000490833 FAM126AQ9BYI3 521 aaPredicted RBP6.29□□□□□ -1.4
FN1-223ENST00000490833 MRPS26Q9BYN8 205 aaKnown RBP6.29□□□□□ -1.4
FN1-223ENST00000490833 CPEB1Q9BZB8 566 aaKnown RBP6.29□□□□□ -1.4
FN1-223ENST00000490833 ATXN3LQ9H3M9 355 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 HIPK3Q9H422 1215 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 GSTO2Q9H4Y5 243 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 ZFYVE1Q9HBF4 777 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 GPBP1L1Q9HC44 474 aaPredicted RBP6.29□□□□□ -1.4
FN1-223ENST00000490833 MAN1C1Q9NR34 630 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 NDFIP2Q9NV92 336 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 CACNA2D2Q9NY47 1150 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 TUBA8Q9NY65 449 aaPredicted RBP6.29□□□□□ -1.4
FN1-223ENST00000490833 DLGAP2Q9P1A6 1054 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 ACTR3BQ9P1U1 418 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 SLC2A6Q9UGQ3 507 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 EIF3LQ9Y262 564 aaKnown RBP6.29□□□□□ -1.4
FN1-223ENST00000490833 CRYL1Q9Y2S2 319 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 TMED5Q9Y3A6 229 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 NUMBLQ9Y6R0 609 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 COMMD3-BMI1R4GMX3 469 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 PTPRDP23468 1912 aa6.29□□□□□ -1.4
FN1-223ENST00000490833 PLXNA3P51805 1871 aa6.28□□□□□ -1.4
FN1-223ENST00000490833 TRAV19A0A0A6YYK7 116 aa6.28□□□□□ -1.4
FN1-223ENST00000490833 A0A0J9YYE9 177 aa6.28□□□□□ -1.4
FN1-223ENST00000490833 TCRBV3S1A0A5B6 114 aa6.28□□□□□ -1.4
FN1-223ENST00000490833 FAM234BA2RU67 622 aa6.28□□□□□ -1.4
FN1-223ENST00000490833 CBX4O00257 560 aa6.28□□□□□ -1.4
FN1-223ENST00000490833 ARNTLO00327 626 aa6.28□□□□□ -1.4
FN1-223ENST00000490833 ACOT8O14734 319 aa6.28□□□□□ -1.4
FN1-223ENST00000490833 SLC9A3R1O14745 358 aaPredicted RBP6.28□□□□□ -1.4
FN1-223ENST00000490833 COCHO43405 550 aa6.28□□□□□ -1.4
FN1-223ENST00000490833 BUD23O43709 281 aaKnown RBP6.28□□□□□ -1.4
FN1-223ENST00000490833 SNAP91O60641 907 aa6.28□□□□□ -1.4
FN1-223ENST00000490833 NBNO60934 754 aa6.28□□□□□ -1.4
FN1-223ENST00000490833 TULP3O75386 442 aa6.28□□□□□ -1.4
FN1-223ENST00000490833 POP4O95707 220 aaKnown RBP6.28□□□□□ -1.4
FN1-223ENST00000490833 TOP3BO95985 862 aaKnown RBP6.28□□□□□ -1.4
FN1-223ENST00000490833 KRT6AP02538 564 aa6.28□□□□□ -1.4
FN1-223ENST00000490833 KRT6BP04259 564 aa6.28□□□□□ -1.4
FN1-223ENST00000490833 IL6P05231 212 aa6.28□□□□□ -1.4
FN1-223ENST00000490833 HMBSP08397 361 aa6.28□□□□□ -1.4
FN1-223ENST00000490833 RPS17P08708 135 aaKnown RBP6.28□□□□□ -1.4
FN1-223ENST00000490833 HIST1H2AGP0C0S8 130 aaPredicted RBP6.28□□□□□ -1.4
FN1-223ENST00000490833 FAM58BPP0C7Q3 252 aa6.28□□□□□ -1.4
FN1-223ENST00000490833 PABPC4LP0CB38 370 aaKnown RBP6.28□□□□□ -1.4
FN1-223ENST00000490833 MBL2P11226 248 aaPredicted RBP6.28□□□□□ -1.4
FN1-223ENST00000490833 HNRNPLP14866 589 aaKnown RBP eCLIP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms