RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 IFI35P80217 286 aaPredicted RBP10.27□□□□□ -0.77
TTC28-207ENST00000490475 LY6DQ14210 128 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 KIR2DS5Q14953 304 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 PRKD1Q15139 912 aaPredicted RBP10.27□□□□□ -0.77
TTC28-207ENST00000490475 DNTTIP2Q5QJE6 756 aaKnown RBP10.27□□□□□ -0.77
TTC28-207ENST00000490475 DCAF12Q5T6F0 453 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 CCDC181Q5TID7 509 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 KIAA1614Q5VZ46 1190 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 PDPK2PQ6A1A2 396 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 DOK6Q6PKX4 331 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 WDR74Q6RFH5 385 aaPredicted RBP10.27□□□□□ -0.77
TTC28-207ENST00000490475 ZNF662Q6ZS27 426 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 BZW1Q7L1Q6 419 aaKnown RBP10.27□□□□□ -0.77
TTC28-207ENST00000490475 SLC9B2Q86UD5 537 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 TSPAN33Q86UF1 283 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 PELI3Q8N2H9 469 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 SFRP1Q8N474 314 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 TFB1MQ8WVM0 346 aaKnown RBP10.27□□□□□ -0.77
TTC28-207ENST00000490475 COX14Q96I36 57 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 AGAP3Q96P47 875 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 CATSPER2Q96P56 530 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 SMIM14Q96QK8 99 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 MLPHQ9BV36 600 aaPredicted RBP10.27□□□□□ -0.77
TTC28-207ENST00000490475 TRIT1Q9H3H1 467 aaKnown RBP10.27□□□□□ -0.77
TTC28-207ENST00000490475 SEMA6CQ9H3T2 930 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 FAM83DQ9H4H8 585 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 SUDS3Q9H7L9 328 aaPredicted RBP10.27□□□□□ -0.77
TTC28-207ENST00000490475 RDH14Q9HBH5 336 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 SARS2Q9NP81 518 aaKnown RBP10.27□□□□□ -0.77
TTC28-207ENST00000490475 EFR3BQ9Y2G0 817 aa10.27□□□□□ -0.77
TTC28-207ENST00000490475 TLN1Q9Y490 2541 aaKnown RBP10.26□□□□□ -0.77
TTC28-207ENST00000490475 A0A0U1RQS6 177 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 C1orf232A0A0U1RR37 186 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 TCRBV7S2A1N4TA0A589 114 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 ANKRD66B4E2M5 251 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 C9orf172C9J069 976 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 H7C0C1 242 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 APOC4-APOC2K7ER74 178 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 SOD1P00441 154 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 APOC2P02655 101 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 FUCA1P04066 466 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 TUBB4AP04350 444 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 MMP2P08253 660 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 THRAP10827 490 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 PTPN3P26045 913 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 PTPN7P35236 360 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 CETN2P41208 172 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 CD86P42081 329 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 ATP5OP48047 213 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 SPINT3P49223 89 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 PPM1FP49593 454 aaPredicted RBP10.26□□□□□ -0.77
TTC28-207ENST00000490475 OTUD4Q01804 1114 aaKnown RBP10.26□□□□□ -0.77
TTC28-207ENST00000490475 HHEXQ03014 270 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 WASHC5Q12768 1159 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 C16orf72Q14CZ0 275 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 SLC14A2Q15849 920 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 TEX44Q53QW1 395 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 MEI1Q5TIA1 1274 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 CCDC70Q6NSX1 233 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 CYB5D1Q6P9G0 228 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 KDELC2Q7Z4H8 507 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 PHYKPLQ8IUZ5 450 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 IL22RA1Q8N6P7 574 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 LPCAT1Q8NF37 534 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 ACTL9Q8TC94 416 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 SCAMP4Q969E2 229 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 KIAA1143Q96AT1 154 aaPredicted RBP10.26□□□□□ -0.77
TTC28-207ENST00000490475 CCDC74BQ96LY2 380 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 NUDT22Q9BRQ3 303 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 ZSCAN5AQ9BUG6 496 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 RIOK2Q9BVS4 552 aaKnown RBP10.26□□□□□ -0.77
TTC28-207ENST00000490475 CARD9Q9H257 536 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 ADNPQ9H2P0 1102 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 ASH1LQ9NR48 2969 aaKnown RBP10.26□□□□□ -0.77
TTC28-207ENST00000490475 PDP2Q9P2J9 529 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 ZNHIT2Q9UHR6 403 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 CD84Q9UIB8 345 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 CHKBQ9Y259 395 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 PCDHGA4Q9Y5G9 962 aa10.26□□□□□ -0.77
TTC28-207ENST00000490475 CASC3O15234 703 aaKnown RBP10.25□□□□□ -0.77
TTC28-207ENST00000490475 PPM1DO15297 605 aa10.25□□□□□ -0.77
TTC28-207ENST00000490475 PPFIA2O75334 1257 aa10.25□□□□□ -0.77
TTC28-207ENST00000490475 TJP3O95049 919 aa10.25□□□□□ -0.77
TTC28-207ENST00000490475 CLDN7O95471 211 aa10.25□□□□□ -0.77
TTC28-207ENST00000490475 PRLP01236 227 aa10.25□□□□□ -0.77
TTC28-207ENST00000490475 RBL1P28749 1068 aa10.25□□□□□ -0.77
TTC28-207ENST00000490475 CD68P34810 354 aaPredicted RBP10.25□□□□□ -0.77
TTC28-207ENST00000490475 ETV5P41161 510 aa10.25□□□□□ -0.77
TTC28-207ENST00000490475 TNNT3P45378 269 aaPredicted RBP10.25□□□□□ -0.77
TTC28-207ENST00000490475 POLD2P49005 469 aa10.25□□□□□ -0.77
TTC28-207ENST00000490475 CLCNKAP51800 687 aa10.25□□□□□ -0.77
TTC28-207ENST00000490475 DCDC1P59894 354 aa10.25□□□□□ -0.77
TTC28-207ENST00000490475 RPS6KA1Q15418 735 aa10.25□□□□□ -0.77
TTC28-207ENST00000490475 TGIF1Q15583 401 aa10.25□□□□□ -0.77
TTC28-207ENST00000490475 HENMT1Q5T8I9 393 aaKnown RBP10.25□□□□□ -0.77
TTC28-207ENST00000490475 ZDHHC20Q5W0Z9 365 aa10.25□□□□□ -0.77
TTC28-207ENST00000490475 CEACAM20Q6UY09 585 aa10.25□□□□□ -0.77
TTC28-207ENST00000490475 ZNF574Q6ZN55 896 aaPredicted RBP10.25□□□□□ -0.77
TTC28-207ENST00000490475 NYAP1Q6ZVC0 841 aa10.25□□□□□ -0.77
TTC28-207ENST00000490475 LYSMD3Q7Z3D4 306 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms