RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 TNNT3P45378 269 aaPredicted RBP11.12□□□□□ -0.63
DUBR-204ENST00000490441 DCDC1P59894 354 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 DYNLT1P63172 113 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 CDK18Q07002 472 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 PCSK7Q16549 785 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 TBR1Q16650 682 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 INSCQ1MX18 579 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 ANKS6Q68DC2 871 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 PDPK2PQ6A1A2 396 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 SLC9A4Q6AI14 798 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 CRTC3Q6UUV7 619 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 BZW1Q7L1Q6 419 aaKnown RBP11.12□□□□□ -0.63
DUBR-204ENST00000490441 TRIM48Q8IWZ4 208 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 CNTD1Q8N815 330 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 EXD3Q8N9H8 876 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 NKD1Q969G9 470 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 PMEPA1Q969W9 287 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 WDR24Q96S15 920 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 SRPK1Q96SB4 655 aaKnown RBP11.12□□□□□ -0.63
DUBR-204ENST00000490441 BRD8Q9H0E9 1235 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 SLC25A51Q9H1U9 297 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 OR2AG1Q9H205 316 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 MAGEE1Q9HCI5 957 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 OCIAD1Q9NX40 245 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 ATXN10Q9UBB4 475 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 CPNE7Q9UBL6 633 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 ZNF711Q9Y462 761 aa11.12□□□□□ -0.63
DUBR-204ENST00000490441 PCYT1BQ9Y5K3 369 aaPredicted RBP11.12□□□□□ -0.63
DUBR-204ENST00000490441 ASH1LQ9NR48 2969 aaKnown RBP11.12□□□□□ -0.63
DUBR-204ENST00000490441 CAPN5O15484 640 aaPredicted RBP11.11□□□□□ -0.63
DUBR-204ENST00000490441 PIRTP0C851 137 aa11.11□□□□□ -0.63
DUBR-204ENST00000490441 ZNF8P17098 575 aaPredicted RBP11.11□□□□□ -0.63
DUBR-204ENST00000490441 WT1P19544 449 aaPredicted RBP11.11□□□□□ -0.63
DUBR-204ENST00000490441 SLC1A1P43005 524 aa11.11□□□□□ -0.63
DUBR-204ENST00000490441 CYP4F2P78329 520 aa11.11□□□□□ -0.63
DUBR-204ENST00000490441 SLC14A2Q15849 920 aa11.11□□□□□ -0.63
DUBR-204ENST00000490441 ASTE1Q2TB18 679 aaPredicted RBP11.11□□□□□ -0.63
DUBR-204ENST00000490441 LRRC38Q5VT99 294 aa11.11□□□□□ -0.63
DUBR-204ENST00000490441 CEACAM20Q6UY09 585 aa11.11□□□□□ -0.63
DUBR-204ENST00000490441 PLXDC1Q8IUK5 500 aa11.11□□□□□ -0.63
DUBR-204ENST00000490441 RHOT1Q8IXI2 618 aa11.11□□□□□ -0.63
DUBR-204ENST00000490441 TRAM1L1Q8N609 369 aa11.11□□□□□ -0.63
DUBR-204ENST00000490441 GLYATL1Q969I3 302 aa11.11□□□□□ -0.63
DUBR-204ENST00000490441 KIAA1143Q96AT1 154 aaPredicted RBP11.11□□□□□ -0.63
DUBR-204ENST00000490441 IMP4Q96G21 291 aaKnown RBP11.11□□□□□ -0.63
DUBR-204ENST00000490441 TRIB3Q96RU7 358 aa11.11□□□□□ -0.63
DUBR-204ENST00000490441 ZPBPQ9BS86 351 aa11.11□□□□□ -0.63
DUBR-204ENST00000490441 TRIM39Q9HCM9 518 aa11.11□□□□□ -0.63
DUBR-204ENST00000490441 ARFGAP3Q9NP61 516 aa11.11□□□□□ -0.63
DUBR-204ENST00000490441 KLC4Q9NSK0 619 aa11.11□□□□□ -0.63
DUBR-204ENST00000490441 ABHD10Q9NUJ1 306 aa11.11□□□□□ -0.63
DUBR-204ENST00000490441 SPTLC3Q9NUV7 552 aa11.11□□□□□ -0.63
DUBR-204ENST00000490441 DDX56Q9NY93 547 aaKnown RBP11.11□□□□□ -0.63
DUBR-204ENST00000490441 PDP2Q9P2J9 529 aa11.11□□□□□ -0.63
DUBR-204ENST00000490441 KLHL3Q9UH77 587 aa11.11□□□□□ -0.63
DUBR-204ENST00000490441 MYO18BQ8IUG5 2567 aa11.11□□□□□ -0.63
DUBR-204ENST00000490441 A0A0A6YYK5 440 aaPredicted RBP11.1□□□□□ -0.63
DUBR-204ENST00000490441 A6NCN8 305 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 LILRA5A6NI73 299 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 ZNF891A8MT65 544 aaPredicted RBP11.1□□□□□ -0.63
DUBR-204ENST00000490441 PDZK1P1A8MUH7 402 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 SPOPO43791 374 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 PPFIA2O75334 1257 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 PMPCBO75439 489 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 NDST3O95803 873 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 VIPP01282 170 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 LIFP15018 202 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 CD46P15529 392 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 VCLP18206 1134 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 ARSDP51689 593 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 CLCNKAP51800 687 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 MC2RQ01718 297 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 KCNC4Q03721 635 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 PLA2G4EQ3MJ16 856 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 ZNF648Q5T619 568 aaPredicted RBP11.1□□□□□ -0.63
DUBR-204ENST00000490441 BORAQ6PGQ7 559 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 NPNTQ6UXI9 565 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 ARHGAP22Q7Z5H3 698 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 TMC3Q7Z5M5 1100 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 LRRTM4Q86VH4 590 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 NLGN4XQ8N0W4 816 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 GPR26Q8NDV2 337 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 NLGN4YQ8NFZ3 816 aaPredicted RBP11.1□□□□□ -0.63
DUBR-204ENST00000490441 GDAP1Q8TB36 358 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 HTR3CQ8WXA8 447 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 RTP4Q96DX8 246 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 OLFM3Q96PB7 478 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 CTRCQ99895 268 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 EFHD1Q9BUP0 239 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 CLMPQ9H6B4 373 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 NHEJ1Q9H9Q4 299 aaPredicted RBP11.1□□□□□ -0.63
DUBR-204ENST00000490441 GPN2Q9H9Y4 310 aaPredicted RBP11.1□□□□□ -0.63
DUBR-204ENST00000490441 GLOD4Q9HC38 313 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 PRDM8Q9NQV8 689 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 STARD5Q9NSY2 213 aa11.1□□□□□ -0.63
DUBR-204ENST00000490441 NFKBIL1Q9UBC1 381 aaPredicted RBP11.1□□□□□ -0.63
DUBR-204ENST00000490441 C3orf70A6NLC5 250 aaPredicted RBP11.09□□□□□ -0.63
DUBR-204ENST00000490441 PYCARD-AS1I3L0S3 204 aa11.09□□□□□ -0.63
DUBR-204ENST00000490441 KMOO15229 486 aa11.09□□□□□ -0.63
DUBR-204ENST00000490441 VEGFDO43915 354 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms