RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 CLCNKAP51800 687 aa17.25■□□□□ 0.35
ERCC3-207ENST00000490062 TERF1P54274 439 aa17.25■□□□□ 0.35
ERCC3-207ENST00000490062 ARL4CP56559 192 aa17.25■□□□□ 0.35
ERCC3-207ENST00000490062 TMPRSS15P98073 1019 aa17.25■□□□□ 0.35
ERCC3-207ENST00000490062 TMEM115Q12893 351 aaPredicted RBP17.25■□□□□ 0.35
ERCC3-207ENST00000490062 ITIH4Q14624 930 aa17.25■□□□□ 0.35
ERCC3-207ENST00000490062 ELOCQ15369 112 aa17.25■□□□□ 0.35
ERCC3-207ENST00000490062 HIF1AQ16665 826 aa17.25■□□□□ 0.35
ERCC3-207ENST00000490062 KHDC1Q4VXA5 237 aaKnown RBP17.25■□□□□ 0.35
ERCC3-207ENST00000490062 ZNF542PQ5EBM4 170 aa17.25■□□□□ 0.35
ERCC3-207ENST00000490062 FNBP1LQ5T0N5 605 aa17.25■□□□□ 0.35
ERCC3-207ENST00000490062 LYPLAL1Q5VWZ2 237 aa17.25■□□□□ 0.35
ERCC3-207ENST00000490062 CERS6Q6ZMG9 384 aa17.25■□□□□ 0.35
ERCC3-207ENST00000490062 HID1Q8IV36 788 aa17.25■□□□□ 0.35
ERCC3-207ENST00000490062 RBFAQ8N0V3 343 aa17.25■□□□□ 0.35
ERCC3-207ENST00000490062 ART4Q93070 314 aa17.25■□□□□ 0.35
ERCC3-207ENST00000490062 MFSD3Q96ES6 412 aa17.25■□□□□ 0.35
ERCC3-207ENST00000490062 ZNF514Q96K75 400 aaPredicted RBP17.25■□□□□ 0.35
ERCC3-207ENST00000490062 OR2M4Q96R27 311 aa17.25■□□□□ 0.35
ERCC3-207ENST00000490062 EBNA1BP2Q99848 306 aaKnown RBP17.25■□□□□ 0.35
ERCC3-207ENST00000490062 RTKNQ9BST9 563 aa17.25■□□□□ 0.35
ERCC3-207ENST00000490062 FOXP3Q9BZS1 431 aa17.25■□□□□ 0.35
ERCC3-207ENST00000490062 TRIM31Q9BZY9 425 aa17.25■□□□□ 0.35
ERCC3-207ENST00000490062 TCEAL2Q9H3H9 227 aaPredicted RBP17.25■□□□□ 0.35
ERCC3-207ENST00000490062 SUDS3Q9H7L9 328 aaPredicted RBP17.25■□□□□ 0.35
ERCC3-207ENST00000490062 CYP4F12Q9HCS2 524 aa17.25■□□□□ 0.35
ERCC3-207ENST00000490062 MRPL40Q9NQ50 206 aaKnown RBP17.25■□□□□ 0.35
ERCC3-207ENST00000490062 ZDHHC3Q9NYG2 299 aa17.25■□□□□ 0.35
ERCC3-207ENST00000490062 GPR34Q9UPC5 381 aa17.25■□□□□ 0.35
ERCC3-207ENST00000490062 TMEM98Q9Y2Y6 226 aa17.25■□□□□ 0.35
ERCC3-207ENST00000490062 DNMT3AQ9Y6K1 912 aaPredicted RBP17.25■□□□□ 0.35
ERCC3-207ENST00000490062 DNAH14Q0VDD8 3507 aa17.25■□□□□ 0.35
ERCC3-207ENST00000490062 PCNX2A6NKB5 2137 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 ZCWPW2A0A1B0GU75 182 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 KLHL33A6NCF5 533 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 PRR19A6NJB7 356 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 CCL22O00626 93 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 EIF3HO15372 352 aaKnown RBP eCLIP17.24■□□□□ 0.35
ERCC3-207ENST00000490062 GPR39O43194 453 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 KCNJ13O60928 360 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 CDK14O94921 469 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 TTC4O95801 387 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 GOT2P00505 430 aaKnown RBP17.24■□□□□ 0.35
ERCC3-207ENST00000490062 ZNF8P17098 575 aaPredicted RBP17.24■□□□□ 0.35
ERCC3-207ENST00000490062 ACRV1P26436 265 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 POLD2P49005 469 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 PRAMEP78395 509 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 MRPS25P82663 173 aaKnown RBP17.24■□□□□ 0.35
ERCC3-207ENST00000490062 DHX9Q08211 1270 aaKnown RBP17.24■□□□□ 0.35
ERCC3-207ENST00000490062 FRG1Q14331 258 aaKnown RBP17.24■□□□□ 0.35
ERCC3-207ENST00000490062 ANKRD20A4Q4UJ75 823 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 MSS51Q4VC12 460 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 PRRT3Q5FWE3 981 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 PACS1Q6VY07 963 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 PIANPQ8IYJ0 282 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 FAM181AQ8N9Y4 354 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 GPR150Q8NGU9 434 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 OR4L1Q8NH43 312 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 OR4C6Q8NH72 309 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 STAMBPL1Q96FJ0 436 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 COPS8Q99627 209 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 DUSP23Q9BVJ7 150 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 CARD6Q9BX69 1037 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 CLPBQ9H078 707 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 CARS2Q9HA77 564 aaKnown RBP17.24■□□□□ 0.35
ERCC3-207ENST00000490062 UCKL1Q9NWZ5 548 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 NLGN3Q9NZ94 848 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 CRLS1Q9UJA2 301 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 TEX264Q9Y6I9 313 aa17.24■□□□□ 0.35
ERCC3-207ENST00000490062 BPTFQ12830 3046 aa17.23■□□□□ 0.35
ERCC3-207ENST00000490062 GRID2O43424 1007 aa17.23■□□□□ 0.35
ERCC3-207ENST00000490062 ASMTLO95671 621 aa17.23■□□□□ 0.35
ERCC3-207ENST00000490062 PGAM1P18669 254 aa17.23■□□□□ 0.35
ERCC3-207ENST00000490062 PAMP19021 973 aa17.23■□□□□ 0.35
ERCC3-207ENST00000490062 B4GALNT1Q00973 533 aa17.23■□□□□ 0.35
ERCC3-207ENST00000490062 BCL7AQ4VC05 210 aa17.23■□□□□ 0.35
ERCC3-207ENST00000490062 AARS2Q5JTZ9 985 aaKnown RBP17.23■□□□□ 0.35
ERCC3-207ENST00000490062 PSAPL1Q6NUJ1 521 aa17.23■□□□□ 0.35
ERCC3-207ENST00000490062 ZDHHC24Q6UX98 284 aa17.23■□□□□ 0.35
ERCC3-207ENST00000490062 GLRX5Q86SX6 157 aa17.23■□□□□ 0.35
ERCC3-207ENST00000490062 SERPINA9Q86WD7 417 aa17.23■□□□□ 0.35
ERCC3-207ENST00000490062 GALNT13Q8IUC8 556 aa17.23■□□□□ 0.35
ERCC3-207ENST00000490062 ZNF547Q8IVP9 402 aa17.23■□□□□ 0.35
ERCC3-207ENST00000490062 NAXDQ8IW45 347 aa17.23■□□□□ 0.35
ERCC3-207ENST00000490062 LMNTD2Q8IXW0 634 aa17.23■□□□□ 0.35
ERCC3-207ENST00000490062 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.23■□□□□ 0.35
ERCC3-207ENST00000490062 LINC00615Q96LM1 132 aaPredicted RBP17.23■□□□□ 0.35
ERCC3-207ENST00000490062 TIMM29Q9BSF4 260 aa17.23■□□□□ 0.35
ERCC3-207ENST00000490062 TMEM168Q9H0V1 697 aa17.23■□□□□ 0.35
ERCC3-207ENST00000490062 OR2AG1Q9H205 316 aa17.23■□□□□ 0.35
ERCC3-207ENST00000490062 DPH5Q9H2P9 285 aa17.23■□□□□ 0.35
ERCC3-207ENST00000490062 CDV3Q9UKY7 258 aaKnown RBP17.23■□□□□ 0.35
ERCC3-207ENST00000490062 PCOLCE2Q9UKZ9 415 aa17.23■□□□□ 0.35
ERCC3-207ENST00000490062 FAM169AQ9Y6X4 670 aa17.23■□□□□ 0.35
ERCC3-207ENST00000490062 CCDC78A2IDD5 438 aa17.22■□□□□ 0.35
ERCC3-207ENST00000490062 CFAP99D6REC4 459 aa17.22■□□□□ 0.35
ERCC3-207ENST00000490062 KMOO15229 486 aa17.22■□□□□ 0.35
ERCC3-207ENST00000490062 SGTAO43765 313 aa17.22■□□□□ 0.35
ERCC3-207ENST00000490062 SDC3O75056 442 aa17.22■□□□□ 0.35
ERCC3-207ENST00000490062 POLBP06746 335 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms