RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 COPS8Q99627 209 aa14.03□□□□□ -0.16
VPS26A-205ENST00000489656 C1QTNF1Q9BXJ1 281 aa14.03□□□□□ -0.16
VPS26A-205ENST00000489656 SLC13A1Q9BZW2 595 aa14.03□□□□□ -0.16
VPS26A-205ENST00000489656 CLPBQ9H078 707 aa14.03□□□□□ -0.16
VPS26A-205ENST00000489656 IQCGQ9H095 443 aaKnown RBP14.03□□□□□ -0.16
VPS26A-205ENST00000489656 SLC6A17Q9H1V8 727 aa14.03□□□□□ -0.16
VPS26A-205ENST00000489656 VPS11Q9H270 941 aa14.03□□□□□ -0.16
VPS26A-205ENST00000489656 TAS2R13Q9NYV9 303 aa14.03□□□□□ -0.16
VPS26A-205ENST00000489656 GNPTGQ9UJJ9 305 aa14.03□□□□□ -0.16
VPS26A-205ENST00000489656 NCKAP1Q9Y2A7 1128 aa14.03□□□□□ -0.16
VPS26A-205ENST00000489656 MED16Q9Y2X0 877 aa14.03□□□□□ -0.16
VPS26A-205ENST00000489656 COQ6Q9Y2Z9 468 aa14.03□□□□□ -0.16
VPS26A-205ENST00000489656 ACOT9Q9Y305 439 aa14.03□□□□□ -0.16
VPS26A-205ENST00000489656 GOLGA8CPA6NN73 597 aa14.02□□□□□ -0.17
VPS26A-205ENST00000489656 FADS2P1A8MWK0 482 aa14.02□□□□□ -0.17
VPS26A-205ENST00000489656 PHGDHO43175 533 aaKnown RBP14.02□□□□□ -0.17
VPS26A-205ENST00000489656 SHOX2O60902 331 aaPredicted RBP14.02□□□□□ -0.17
VPS26A-205ENST00000489656 SOD1P00441 154 aa14.02□□□□□ -0.17
VPS26A-205ENST00000489656 ACADMP11310 421 aa14.02□□□□□ -0.17
VPS26A-205ENST00000489656 SKIV2L2P42285 1042 aaKnown RBP14.02□□□□□ -0.17
VPS26A-205ENST00000489656 WDR4P57081 412 aaKnown RBP14.02□□□□□ -0.17
VPS26A-205ENST00000489656 RPS21P63220 83 aaKnown RBP14.02□□□□□ -0.17
VPS26A-205ENST00000489656 UBXN2BQ14CS0 331 aa14.02□□□□□ -0.17
VPS26A-205ENST00000489656 TSNAXIP1Q2TAA8 658 aa14.02□□□□□ -0.17
VPS26A-205ENST00000489656 TMEM259Q4ZIN3 620 aa14.02□□□□□ -0.17
VPS26A-205ENST00000489656 SETMARQ53H47 684 aaPredicted RBP14.02□□□□□ -0.17
VPS26A-205ENST00000489656 LDLRAP1Q5SW96 308 aa14.02□□□□□ -0.17
VPS26A-205ENST00000489656 CENPLQ8N0S6 344 aaPredicted RBP14.02□□□□□ -0.17
VPS26A-205ENST00000489656 SIX5Q8N196 739 aa14.02□□□□□ -0.17
VPS26A-205ENST00000489656 ANKRD42Q8N9B4 389 aa14.02□□□□□ -0.17
VPS26A-205ENST00000489656 BTN2A2Q8WVV5 523 aa14.02□□□□□ -0.17
VPS26A-205ENST00000489656 ASB12Q8WXK4 309 aa14.02□□□□□ -0.17
VPS26A-205ENST00000489656 GLYATL1Q969I3 302 aa14.02□□□□□ -0.17
VPS26A-205ENST00000489656 CLDN23Q96B33 292 aa14.02□□□□□ -0.17
VPS26A-205ENST00000489656 UBXN10Q96LJ8 280 aa14.02□□□□□ -0.17
VPS26A-205ENST00000489656 ASB2Q96Q27 587 aa14.02□□□□□ -0.17
VPS26A-205ENST00000489656 CCDC134Q9H6E4 229 aa14.02□□□□□ -0.17
VPS26A-205ENST00000489656 USP36Q9P275 1121 aaKnown RBP14.02□□□□□ -0.17
VPS26A-205ENST00000489656 SLC17A7Q9P2U7 560 aa14.02□□□□□ -0.17
VPS26A-205ENST00000489656 MTF2Q9Y483 593 aaPredicted RBP14.02□□□□□ -0.17
VPS26A-205ENST00000489656 OAS3Q9Y6K5 1087 aaKnown RBP14.02□□□□□ -0.17
VPS26A-205ENST00000489656 FAM170BA6NMN3 283 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 SRRM3A6NNA2 597 aaPredicted RBP14.01□□□□□ -0.17
VPS26A-205ENST00000489656 C10orf142B7Z368 130 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 VPS26AO75436 327 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 RHOBTB1O94844 696 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 AP2A2O94973 939 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 KLHL2O95198 593 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 PCDH8O95206 1070 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 SAT1P21673 171 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 RPS9P46781 194 aaKnown RBP14.01□□□□□ -0.17
VPS26A-205ENST00000489656 B4GALNT1Q00973 533 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 IRF9Q00978 393 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 GUCY1A3Q02108 690 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 GAS6Q14393 721 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 SEPT7Q16181 437 aaKnown RBP14.01□□□□□ -0.17
VPS26A-205ENST00000489656 CCDC153Q494R4 210 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 UGT3A1Q6NUS8 523 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 LVRNQ6Q4G3 990 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 HORMAD1Q86X24 394 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 PLD6Q8N2A8 252 aaKnown RBP14.01□□□□□ -0.17
VPS26A-205ENST00000489656 OR14C36Q8NHC7 312 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 GANCQ8TET4 914 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 TSNARE1Q96NA8 513 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 FAM111AQ96PZ2 611 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 BOCQ9BWV1 1114 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 C1QTNF2Q9BXJ5 285 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 CAPS2Q9BXY5 557 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 FOXQ1Q9C009 403 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 CHRDQ9H2X0 955 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 TBC1D17Q9HA65 648 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 SYTL2Q9HCH5 934 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 GPAMQ9HCL2 828 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 ITM2CQ9NQX7 267 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 LATS2Q9NRM7 1088 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 KLHL42Q9P2K6 505 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 EMCNQ9ULC0 261 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 CNOT6Q9ULM6 557 aaKnown RBP14.01□□□□□ -0.17
VPS26A-205ENST00000489656 ZFR2Q9UPR6 939 aaKnown RBP14.01□□□□□ -0.17
VPS26A-205ENST00000489656 LRP4O75096 1905 aa14.01□□□□□ -0.17
VPS26A-205ENST00000489656 IGLON5A6NGN9 336 aa14□□□□□ -0.17
VPS26A-205ENST00000489656 CFAP99D6REC4 459 aa14□□□□□ -0.17
VPS26A-205ENST00000489656 F8W8V4 182 aa14□□□□□ -0.17
VPS26A-205ENST00000489656 QSOX1O00391 747 aa14□□□□□ -0.17
VPS26A-205ENST00000489656 PLIN3O60664 434 aa14□□□□□ -0.17
VPS26A-205ENST00000489656 RNGTTO60942 597 aaKnown RBP14□□□□□ -0.17
VPS26A-205ENST00000489656 NIPSNAP2O75323 286 aa14□□□□□ -0.17
VPS26A-205ENST00000489656 TOP3BO95985 862 aaKnown RBP14□□□□□ -0.17
VPS26A-205ENST00000489656 PROCP04070 461 aa14□□□□□ -0.17
VPS26A-205ENST00000489656 APOA4P06727 396 aa14□□□□□ -0.17
VPS26A-205ENST00000489656 RALBP11234 206 aa14□□□□□ -0.17
VPS26A-205ENST00000489656 ZNF37AP17032 561 aaPredicted RBP14□□□□□ -0.17
VPS26A-205ENST00000489656 TPMTP51580 245 aa14□□□□□ -0.17
VPS26A-205ENST00000489656 KPNA2P52292 529 aaKnown RBP14□□□□□ -0.17
VPS26A-205ENST00000489656 CBX1P83916 185 aa14□□□□□ -0.17
VPS26A-205ENST00000489656 ZNF460Q14592 562 aa14□□□□□ -0.17
VPS26A-205ENST00000489656 N4BP2L1Q5TBK1 243 aaPredicted RBP14□□□□□ -0.17
VPS26A-205ENST00000489656 HHATQ5VTY9 493 aa14□□□□□ -0.17
VPS26A-205ENST00000489656 PTRHD1Q6GMV3 140 aaKnown RBP14□□□□□ -0.17
VPS26A-205ENST00000489656 KIAA1324Q6UXG2 1013 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms