RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 CHRNGP07510 517 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 CD1DP15813 335 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 SP100P23497 879 aaPredicted RBP8.41□□□□□ -1.06
VTI1A-207ENST00000489357 MPSTP25325 297 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 WEE1P30291 646 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 CDC25CP30307 473 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 AVPR1AP37288 418 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 MTHFRP42898 656 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 PTGER3P43115 390 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 ABCG1P45844 678 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 GLRBP48167 497 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 PSMD8P48556 350 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 MRPL19P49406 292 aaKnown RBP8.41□□□□□ -1.06
VTI1A-207ENST00000489357 ARSDP51689 593 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 PLK1P53350 603 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 RPS24P62847 133 aaKnown RBP8.41□□□□□ -1.06
VTI1A-207ENST00000489357 SLC7A9P82251 487 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 RAD51Q06609 339 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 DLG1Q12959 904 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 GRIK2Q13002 908 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 STX5Q13190 355 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 CYLC2Q14093 348 aaPredicted RBP8.41□□□□□ -1.06
VTI1A-207ENST00000489357 IHHQ14623 411 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 KPNB1Q14974 876 aaKnown RBP8.41□□□□□ -1.06
VTI1A-207ENST00000489357 E2F5Q15329 346 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 CYTH1Q15438 398 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 TEAD4Q15561 434 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 LSM12Q3MHD2 195 aaKnown RBP8.41□□□□□ -1.06
VTI1A-207ENST00000489357 SPATS1Q496A3 300 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 KHDC1Q4VXA5 237 aaKnown RBP8.41□□□□□ -1.06
VTI1A-207ENST00000489357 ACSBG2Q5FVE4 666 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 ATAT1Q5SQI0 421 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 RARS2Q5T160 578 aaKnown RBP8.41□□□□□ -1.06
VTI1A-207ENST00000489357 RBM20Q5T481 1227 aaKnown RBP8.41□□□□□ -1.06
VTI1A-207ENST00000489357 LYPLAL1Q5VWZ2 237 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 RNF219Q5W0B1 726 aaPredicted RBP8.41□□□□□ -1.06
VTI1A-207ENST00000489357 METTL2BQ6P1Q9 378 aaKnown RBP8.41□□□□□ -1.06
VTI1A-207ENST00000489357 TLDC1Q6P9B6 456 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 RFWD3Q6PCD5 774 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 NCEH1Q6PIU2 408 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 TMC5Q6UXY8 1006 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 HTR3DQ70Z44 454 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 KDELC2Q7Z4H8 507 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 CIR1Q86X95 450 aaPredicted RBP8.41□□□□□ -1.06
VTI1A-207ENST00000489357 MYLK4Q86YV6 388 aaPredicted RBP8.41□□□□□ -1.06
VTI1A-207ENST00000489357 APLFQ8IW19 511 aaPredicted RBP8.41□□□□□ -1.06
VTI1A-207ENST00000489357 CFAP52Q8N1V2 620 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 PELI3Q8N2H9 469 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.41□□□□□ -1.06
VTI1A-207ENST00000489357 KIAA1958Q8N8K9 716 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 OR7D4Q8NG98 312 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 GIMAP7Q8NHV1 300 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 LPGAT1Q92604 370 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 KCNJ9Q92806 393 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 KIAA1191Q96A73 305 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 RMDN1Q96DB5 314 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 PDLIM5Q96HC4 596 aaKnown RBP8.41□□□□□ -1.06
VTI1A-207ENST00000489357 DNAJC1Q96KC8 554 aaKnown RBP8.41□□□□□ -1.06
VTI1A-207ENST00000489357 TBATAQ96M53 351 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 THTPAQ9BU02 230 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 SPON2Q9BUD6 331 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 PHF7Q9BWX1 381 aaPredicted RBP8.41□□□□□ -1.06
VTI1A-207ENST00000489357 MUC3BQ9H195 1237 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 EFCAB1Q9HAE3 211 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 SLC7A8Q9UHI5 535 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 CDH22Q9UJ99 828 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 L3MBTL1Q9Y468 752 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 PCDHB1Q9Y5F3 818 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 OR51B4Q9Y5P0 310 aa8.41□□□□□ -1.06
VTI1A-207ENST00000489357 OAS3Q9Y6K5 1087 aaKnown RBP8.41□□□□□ -1.06
VTI1A-207ENST00000489357 SERTM1A2A2V5 107 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 CCDC78A2IDD5 438 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 BBIP1A8MTZ0 92 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 H0Y626 953 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 CBX4O00257 560 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 NVLO15381 856 aaKnown RBP8.4□□□□□ -1.06
VTI1A-207ENST00000489357 KLK8O60259 260 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 FZD6O60353 706 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 PRMT3O60678 531 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 MOSPD3O75425 235 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 NDUFS3O75489 264 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 TMCC1O94876 653 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 PRLP01236 227 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 MBL2P11226 248 aaPredicted RBP8.4□□□□□ -1.06
VTI1A-207ENST00000489357 PCSK2P16519 638 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 ATP6V1C1P21283 382 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 DDX6P26196 483 aaKnown RBP eCLIP8.4□□□□□ -1.06
VTI1A-207ENST00000489357 HMGCLP35914 325 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 PTDSS1P48651 473 aaKnown RBP8.4□□□□□ -1.06
VTI1A-207ENST00000489357 SCNN1BP51168 640 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 MTTPP55157 894 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 CDKN2DP55273 166 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 PSMA6P60900 246 aaKnown RBP8.4□□□□□ -1.06
VTI1A-207ENST00000489357 ARF5P84085 180 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 ZP2Q05996 745 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 SULT2A1Q06520 285 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 TWF1Q12792 350 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 CDH18Q13634 790 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 SQLEQ14534 574 aa8.4□□□□□ -1.06
VTI1A-207ENST00000489357 RCN1Q15293 331 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms