RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 SLC30A1Q9Y6M5 507 aa7.61□□□□□ -1.19
BEST3-205ENST00000488961 ZNF236Q9UL36 1845 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 UBXN8O00124 270 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 KLF11O14901 512 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 HAT1O14929 419 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 CASQ2O14958 399 aaPredicted RBP7.6□□□□□ -1.19
BEST3-205ENST00000488961 SEPT4O43236 478 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 HOXC11O43248 304 aaPredicted RBP7.6□□□□□ -1.19
BEST3-205ENST00000488961 GRID2O43424 1007 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 GRK2P25098 689 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 PIK3R1P27986 724 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 PRDX6P30041 224 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 FMO4P31512 558 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 SLC6A4P31645 630 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 ACLYP53396 1101 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 DNASE1L3Q13609 305 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 NRF1Q16656 503 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 SIRPB2Q5JXA9 342 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 NAPEPLDQ6IQ20 393 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 BNIPLQ7Z465 357 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 GPR141Q7Z602 305 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 TMEM86AQ8N2M4 240 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 ZNF486Q96H40 463 aaPredicted RBP7.6□□□□□ -1.19
BEST3-205ENST00000488961 TSNARE1Q96NA8 513 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 SLC29A1Q99808 456 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 C1QTNF1Q9BXJ1 281 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 TM6SF2Q9BZW4 377 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 IL22Q9GZX6 179 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 SMG9Q9H0W8 520 aaKnown RBP7.6□□□□□ -1.19
BEST3-205ENST00000488961 OXSMQ9NWU1 459 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 MARCH2Q9P0N8 246 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 RAB26Q9ULW5 256 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 POMPQ9Y244 141 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 RNF11Q9Y3C5 154 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 PATJQ8NI35 1801 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 PTPRDP23468 1912 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 KPNA4O00629 521 aaPredicted RBP7.6□□□□□ -1.19
BEST3-205ENST00000488961 SNAP91O60641 907 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 PRDX3P30048 256 aaKnown RBP7.6□□□□□ -1.19
BEST3-205ENST00000488961 ARCN1P48444 511 aaKnown RBP7.6□□□□□ -1.19
BEST3-205ENST00000488961 POLD3Q15054 466 aaPredicted RBP7.6□□□□□ -1.19
BEST3-205ENST00000488961 OXA1LQ15070 435 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 SPOUT1Q5T280 376 aaKnown RBP7.6□□□□□ -1.19
BEST3-205ENST00000488961 MARC1Q5VT66 337 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 SEL1L3Q68CR1 1132 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 PM20D1Q6GTS8 502 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 LSRQ86X29 649 aaPredicted RBP7.6□□□□□ -1.19
BEST3-205ENST00000488961 GALNT13Q8IUC8 556 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 TOR1AIP2Q8NFQ8 470 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 OR13J1Q8NGT2 312 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 C3orf30Q96M34 536 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 ALPK1Q96QP1 1244 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 CIB1Q99828 191 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 HOXD1Q9GZZ0 328 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 ILKAPQ9H0C8 392 aaPredicted RBP7.6□□□□□ -1.19
BEST3-205ENST00000488961 SEMA4BQ9NPR2 832 aaPredicted RBP7.6□□□□□ -1.19
BEST3-205ENST00000488961 ABCC13Q9NSE7 274 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 IKZF3Q9UKT9 509 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 NLRC5Q86WI3 1866 aa7.6□□□□□ -1.19
BEST3-205ENST00000488961 SNTNA6NMZ2 147 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 K7ERQ8 282 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 UBFD1O14562 309 aaKnown RBP7.59□□□□□ -1.19
BEST3-205ENST00000488961 TLR5O60602 858 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 PRAMEF12O95522 483 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 MLNP12872 115 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 AGTR2P50052 363 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 RAB10P61026 200 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 CAPRIN1Q14444 709 aaKnown RBP7.59□□□□□ -1.19
BEST3-205ENST00000488961 PFKFB4Q16877 469 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 ATXN7L2Q5T6C5 722 aaPredicted RBP7.59□□□□□ -1.19
BEST3-205ENST00000488961 GPR107Q5VW38 600 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 NADSYN1Q6IA69 706 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 ANKRD26P1Q6NSI1 321 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 DDIASQ8IXT1 998 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 PQLC1Q8N2U9 271 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.59□□□□□ -1.19
BEST3-205ENST00000488961 GALNT6Q8NCL4 622 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 PTERQ96BW5 349 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 MAP6Q96JE9 813 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 SLC22A12Q96S37 553 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 SLC30A3Q99726 388 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 C1orf50Q9BV19 199 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 FRMD8Q9BZ67 464 aaPredicted RBP7.59□□□□□ -1.19
BEST3-205ENST00000488961 HIPK3Q9H422 1215 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 RPF2Q9H7B2 306 aaKnown RBP7.59□□□□□ -1.19
BEST3-205ENST00000488961 USP22Q9UPT9 525 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 TCAF1Q9Y4C2 921 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 SF3B1O75533 1304 aaKnown RBP eCLIP7.59□□□□□ -1.19
BEST3-205ENST00000488961 ZFC3H1O60293 1989 aaKnown RBP7.59□□□□□ -1.19
BEST3-205ENST00000488961 MUC3AQ02505 3323 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 ILVBLA1L0T0 632 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 FAM149AA5PLN7 773 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 C2orf78A6NCI8 922 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 MANSC4A6NHS7 340 aaPredicted RBP7.59□□□□□ -1.19
BEST3-205ENST00000488961 H3BMQ9 156 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 MATN3O15232 486 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 VNN2O95498 520 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 LINC00032P0C843 101 aa7.59□□□□□ -1.19
BEST3-205ENST00000488961 ZNF182P17025 639 aaPredicted RBP7.59□□□□□ -1.19
BEST3-205ENST00000488961 NAGAP17050 411 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms