RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 CHFRQ96EP1 664 aa13.23□□□□□ -0.29
CHD1L-208ENST00000488864 FCRL3Q96P31 734 aaPredicted RBP13.23□□□□□ -0.29
CHD1L-208ENST00000488864 SEMA3CQ99985 751 aa13.23□□□□□ -0.29
CHD1L-208ENST00000488864 PHF7Q9BWX1 381 aaPredicted RBP13.23□□□□□ -0.29
CHD1L-208ENST00000488864 TNKS2Q9H2K2 1166 aa13.23□□□□□ -0.29
CHD1L-208ENST00000488864 ZDHHC4Q9NPG8 344 aa13.23□□□□□ -0.29
CHD1L-208ENST00000488864 DEC1Q9P2X7 70 aa13.23□□□□□ -0.29
CHD1L-208ENST00000488864 SLCO3A1Q9UIG8 710 aa13.23□□□□□ -0.29
CHD1L-208ENST00000488864 C7orf72A4D263 438 aa13.22□□□□□ -0.29
CHD1L-208ENST00000488864 ARNTLO00327 626 aa13.22□□□□□ -0.29
CHD1L-208ENST00000488864 CISD3P0C7P0 127 aa13.22□□□□□ -0.29
CHD1L-208ENST00000488864 TCN1P20061 433 aaPredicted RBP13.22□□□□□ -0.29
CHD1L-208ENST00000488864 TPP2P29144 1249 aaPredicted RBP13.22□□□□□ -0.29
CHD1L-208ENST00000488864 SERPINB8P50452 374 aa13.22□□□□□ -0.29
CHD1L-208ENST00000488864 NRF1Q16656 503 aa13.22□□□□□ -0.29
CHD1L-208ENST00000488864 ATXN7L2Q5T6C5 722 aaPredicted RBP13.22□□□□□ -0.29
CHD1L-208ENST00000488864 ZFP1Q6P2D0 407 aa13.22□□□□□ -0.29
CHD1L-208ENST00000488864 LRRC8BQ6P9F7 803 aa13.22□□□□□ -0.29
CHD1L-208ENST00000488864 KLHL35Q6PF15 583 aa13.22□□□□□ -0.29
CHD1L-208ENST00000488864 TMEM126BQ8IUX1 230 aa13.22□□□□□ -0.29
CHD1L-208ENST00000488864 LZICQ8WZA0 190 aa13.22□□□□□ -0.29
CHD1L-208ENST00000488864 NXPE3Q969Y0 559 aa13.22□□□□□ -0.29
CHD1L-208ENST00000488864 ZNF599Q96NL3 588 aa13.22□□□□□ -0.29
CHD1L-208ENST00000488864 GATA5Q9BWX5 397 aaPredicted RBP13.22□□□□□ -0.29
CHD1L-208ENST00000488864 SEPT3Q9UH03 358 aa13.22□□□□□ -0.29
CHD1L-208ENST00000488864 FBXO10Q9UK96 956 aa13.22□□□□□ -0.29
CHD1L-208ENST00000488864 KIF26AQ9ULI4 1882 aaPredicted RBP13.22□□□□□ -0.29
CHD1L-208ENST00000488864 PRRT4C9JH25 899 aa13.22□□□□□ -0.29
CHD1L-208ENST00000488864 ZNF26P17031 533 aaPredicted RBP13.22□□□□□ -0.29
CHD1L-208ENST00000488864 SERPINH1P50454 418 aaKnown RBP13.22□□□□□ -0.29
CHD1L-208ENST00000488864 SULT2A1Q06520 285 aa13.22□□□□□ -0.29
CHD1L-208ENST00000488864 SLC12A1Q13621 1099 aa13.22□□□□□ -0.29
CHD1L-208ENST00000488864 SMAD2Q15796 467 aaKnown RBP13.22□□□□□ -0.29
CHD1L-208ENST00000488864 CCDC153Q494R4 210 aa13.22□□□□□ -0.29
CHD1L-208ENST00000488864 ZNF366Q8N895 744 aa13.22□□□□□ -0.29
CHD1L-208ENST00000488864 KIAA1958Q8N8K9 716 aa13.22□□□□□ -0.29
CHD1L-208ENST00000488864 ACVR1CQ8NER5 493 aa13.22□□□□□ -0.29
CHD1L-208ENST00000488864 FATE1Q969F0 183 aa13.22□□□□□ -0.29
CHD1L-208ENST00000488864 NSMCE3Q96MG7 304 aa13.22□□□□□ -0.29
CHD1L-208ENST00000488864 PSKH2Q96QS6 385 aa13.22□□□□□ -0.29
CHD1L-208ENST00000488864 FCRL5Q96RD9 977 aa13.22□□□□□ -0.29
CHD1L-208ENST00000488864 POLR1EQ9GZS1 481 aaKnown RBP13.22□□□□□ -0.29
CHD1L-208ENST00000488864 SEMA6AQ9H2E6 1030 aa13.22□□□□□ -0.29
CHD1L-208ENST00000488864 WDR41Q9HAD4 459 aa13.22□□□□□ -0.29
CHD1L-208ENST00000488864 ATG2BQ96BY7 2078 aa13.21□□□□□ -0.29
CHD1L-208ENST00000488864 ACOT8O14734 319 aa13.21□□□□□ -0.29
CHD1L-208ENST00000488864 MLNP12872 115 aa13.21□□□□□ -0.29
CHD1L-208ENST00000488864 POLR2EP19388 210 aaKnown RBP13.21□□□□□ -0.29
CHD1L-208ENST00000488864 GP5P40197 560 aa13.21□□□□□ -0.29
CHD1L-208ENST00000488864 OPRD1P41143 372 aa13.21□□□□□ -0.29
CHD1L-208ENST00000488864 PLK1P53350 603 aa13.21□□□□□ -0.29
CHD1L-208ENST00000488864 PGGT1BP53609 377 aa13.21□□□□□ -0.29
CHD1L-208ENST00000488864 RHOAP61586 193 aa13.21□□□□□ -0.29
CHD1L-208ENST00000488864 ECT2LQ008S8 904 aa13.21□□□□□ -0.29
CHD1L-208ENST00000488864 ITPRIPL2Q3MIP1 535 aa13.21□□□□□ -0.29
CHD1L-208ENST00000488864 IL23RQ5VWK5 629 aa13.21□□□□□ -0.29
CHD1L-208ENST00000488864 PTAR1Q7Z6K3 402 aaPredicted RBP13.21□□□□□ -0.29
CHD1L-208ENST00000488864 CHERPQ8IWX8 916 aaKnown RBP13.21□□□□□ -0.29
CHD1L-208ENST00000488864 ALDH16A1Q8IZ83 802 aa13.21□□□□□ -0.29
CHD1L-208ENST00000488864 BBS5Q8N3I7 341 aa13.21□□□□□ -0.29
CHD1L-208ENST00000488864 TSPAN14Q8NG11 270 aa13.21□□□□□ -0.29
CHD1L-208ENST00000488864 RP9Q8TA86 221 aaKnown RBP13.21□□□□□ -0.29
CHD1L-208ENST00000488864 ARRDC2Q8TBH0 407 aa13.21□□□□□ -0.29
CHD1L-208ENST00000488864 ERLEC1Q96DZ1 483 aa13.21□□□□□ -0.29
CHD1L-208ENST00000488864 CNDP1Q96KN2 507 aa13.21□□□□□ -0.29
CHD1L-208ENST00000488864 AGAP2Q99490 1192 aa13.21□□□□□ -0.29
CHD1L-208ENST00000488864 SLC25A51Q9H1U9 297 aa13.21□□□□□ -0.29
CHD1L-208ENST00000488864 FBRSL1Q9HCM7 1045 aaKnown RBP13.21□□□□□ -0.29
CHD1L-208ENST00000488864 TXNDC16Q9P2K2 825 aa13.21□□□□□ -0.29
CHD1L-208ENST00000488864 TMEM114B3SHH9 223 aa13.21□□□□□ -0.3
CHD1L-208ENST00000488864 MATN2O00339 956 aa13.21□□□□□ -0.3
CHD1L-208ENST00000488864 GRID2O43424 1007 aa13.21□□□□□ -0.3
CHD1L-208ENST00000488864 BCAS2O75934 225 aaPredicted RBP13.21□□□□□ -0.3
CHD1L-208ENST00000488864 JUNP05412 331 aaKnown RBP13.21□□□□□ -0.3
CHD1L-208ENST00000488864 MMP2P08253 660 aa13.21□□□□□ -0.3
CHD1L-208ENST00000488864 SRCP12931 536 aa13.21□□□□□ -0.3
CHD1L-208ENST00000488864 BMP1P13497 986 aa13.21□□□□□ -0.3
CHD1L-208ENST00000488864 ME2P23368 584 aa13.21□□□□□ -0.3
CHD1L-208ENST00000488864 GKP32189 559 aa13.21□□□□□ -0.3
CHD1L-208ENST00000488864 MAGEA12P43365 314 aa13.21□□□□□ -0.3
CHD1L-208ENST00000488864 PRPSAP1Q14558 356 aa13.21□□□□□ -0.3
CHD1L-208ENST00000488864 DGKKQ5KSL6 1271 aa13.21□□□□□ -0.3
CHD1L-208ENST00000488864 PGAM4Q8N0Y7 254 aa13.21□□□□□ -0.3
CHD1L-208ENST00000488864 SLC44A3Q8N4M1 653 aa13.21□□□□□ -0.3
CHD1L-208ENST00000488864 OR52K1Q8NGK4 314 aa13.21□□□□□ -0.3
CHD1L-208ENST00000488864 MIPOL1Q8TD10 442 aa13.21□□□□□ -0.3
CHD1L-208ENST00000488864 PDCD6IPQ8WUM4 868 aaKnown RBP13.21□□□□□ -0.3
CHD1L-208ENST00000488864 ATP6V1E2Q96A05 226 aa13.21□□□□□ -0.3
CHD1L-208ENST00000488864 IMP4Q96G21 291 aaKnown RBP13.21□□□□□ -0.3
CHD1L-208ENST00000488864 CERS2Q96G23 380 aa13.21□□□□□ -0.3
CHD1L-208ENST00000488864 NPAS2Q99743 824 aa13.21□□□□□ -0.3
CHD1L-208ENST00000488864 CCT7Q99832 543 aa13.21□□□□□ -0.3
CHD1L-208ENST00000488864 MGME1Q9BQP7 344 aa13.21□□□□□ -0.3
CHD1L-208ENST00000488864 NUF2Q9BZD4 464 aa13.21□□□□□ -0.3
CHD1L-208ENST00000488864 MTG2Q9H4K7 406 aa13.21□□□□□ -0.3
CHD1L-208ENST00000488864 COQ10BQ9H8M1 238 aa13.21□□□□□ -0.3
CHD1L-208ENST00000488864 RSL24D1Q9UHA3 163 aaKnown RBP13.21□□□□□ -0.3
CHD1L-208ENST00000488864 PADI4Q9UM07 663 aa13.21□□□□□ -0.3
CHD1L-208ENST00000488864 A0A096LPK6 155 aa13.2□□□□□ -0.3
CHD1L-208ENST00000488864 TBC1D3BA6NDS4 549 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms