RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 WDR48Q8TAF3 677 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 BRSK1Q8TDC3 778 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 PDLIM2Q96JY6 352 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 ALS2CR12Q96Q35 445 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 DEPDC7Q96QD5 511 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 TBL1YQ9BQ87 522 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 UGT1A7Q9HAW7 530 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 UGT1A10Q9HAW8 530 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 UGT1A8Q9HAW9 530 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 LRIT1Q9P2V4 623 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 TBC1D29Q9UFV1 150 aa14.04□□□□□ -0.16
COL9A2-208ENST00000488463 PMS2P1A4D2B8 440 aa14.03□□□□□ -0.16
COL9A2-208ENST00000488463 AGAP14A8MT82 685 aa14.03□□□□□ -0.16
COL9A2-208ENST00000488463 D6RAR5 112 aa14.03□□□□□ -0.16
COL9A2-208ENST00000488463 PPM1DO15297 605 aa14.03□□□□□ -0.16
COL9A2-208ENST00000488463 LDB2O43679 373 aa14.03□□□□□ -0.16
COL9A2-208ENST00000488463 AP2A1O95782 977 aa14.03□□□□□ -0.16
COL9A2-208ENST00000488463 STIP1P31948 543 aaKnown RBP14.03□□□□□ -0.16
COL9A2-208ENST00000488463 CLCNKAP51800 687 aa14.03□□□□□ -0.16
COL9A2-208ENST00000488463 P3H1Q32P28 736 aa14.03□□□□□ -0.16
COL9A2-208ENST00000488463 ZDHHC20Q5W0Z9 365 aa14.03□□□□□ -0.16
COL9A2-208ENST00000488463 FAM151BQ6UXP7 276 aa14.03□□□□□ -0.16
COL9A2-208ENST00000488463 CHST15Q7LFX5 561 aaPredicted RBP14.03□□□□□ -0.16
COL9A2-208ENST00000488463 B3GNT8Q7Z7M8 397 aa14.03□□□□□ -0.16
COL9A2-208ENST00000488463 PRUNE1Q86TP1 453 aa14.03□□□□□ -0.16
COL9A2-208ENST00000488463 CCNJLQ8IV13 435 aa14.03□□□□□ -0.16
COL9A2-208ENST00000488463 SFRP1Q8N474 314 aa14.03□□□□□ -0.16
COL9A2-208ENST00000488463 NXPE2Q96DL1 559 aa14.03□□□□□ -0.16
COL9A2-208ENST00000488463 ATXN7L3BQ96GX2 97 aa14.03□□□□□ -0.16
COL9A2-208ENST00000488463 PRR11Q96HE9 360 aaPredicted RBP14.03□□□□□ -0.16
COL9A2-208ENST00000488463 PPP1R2P1Q96PQ5 205 aa14.03□□□□□ -0.16
COL9A2-208ENST00000488463 C19orf43Q9BQ61 176 aa14.03□□□□□ -0.16
COL9A2-208ENST00000488463 LRRN3Q9H3W5 708 aa14.03□□□□□ -0.16
COL9A2-208ENST00000488463 SMOXQ9NWM0 555 aa14.03□□□□□ -0.16
COL9A2-208ENST00000488463 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.03□□□□□ -0.16
COL9A2-208ENST00000488463 KALRNO60229 2985 aa14.03□□□□□ -0.16
COL9A2-208ENST00000488463 CFAP46Q8IYW2 2715 aa14.02□□□□□ -0.16
COL9A2-208ENST00000488463 GLYATL1P3A0A0U1RQE8 302 aa14.02□□□□□ -0.17
COL9A2-208ENST00000488463 TLX3O43711 291 aaPredicted RBP14.02□□□□□ -0.17
COL9A2-208ENST00000488463 VEGFDO43915 354 aa14.02□□□□□ -0.17
COL9A2-208ENST00000488463 RPLP0P05388 317 aaKnown RBP14.02□□□□□ -0.17
COL9A2-208ENST00000488463 ACP5P13686 325 aa14.02□□□□□ -0.17
COL9A2-208ENST00000488463 ETS1P14921 441 aa14.02□□□□□ -0.17
COL9A2-208ENST00000488463 LPOP22079 712 aaPredicted RBP14.02□□□□□ -0.17
COL9A2-208ENST00000488463 PSMA3P25788 255 aa14.02□□□□□ -0.17
COL9A2-208ENST00000488463 TNNT3P45378 269 aaPredicted RBP14.02□□□□□ -0.17
COL9A2-208ENST00000488463 FASLGP48023 281 aa14.02□□□□□ -0.17
COL9A2-208ENST00000488463 CCDC173Q0VFZ6 552 aa14.02□□□□□ -0.17
COL9A2-208ENST00000488463 TMEM115Q12893 351 aaPredicted RBP14.02□□□□□ -0.17
COL9A2-208ENST00000488463 PEX6Q13608 980 aa14.02□□□□□ -0.17
COL9A2-208ENST00000488463 CCNG2Q16589 344 aa14.02□□□□□ -0.17
COL9A2-208ENST00000488463 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.02□□□□□ -0.17
COL9A2-208ENST00000488463 DRICH1Q6PGQ1 229 aaPredicted RBP14.02□□□□□ -0.17
COL9A2-208ENST00000488463 IYDQ6PHW0 289 aa14.02□□□□□ -0.17
COL9A2-208ENST00000488463 MICALCLQ6ZW33 695 aa14.02□□□□□ -0.17
COL9A2-208ENST00000488463 Q8N9G6 341 aaPredicted RBP14.02□□□□□ -0.17
COL9A2-208ENST00000488463 DDHD1Q8NEL9 900 aa14.02□□□□□ -0.17
COL9A2-208ENST00000488463 OR4K2Q8NGD2 314 aa14.02□□□□□ -0.17
COL9A2-208ENST00000488463 OR13C4Q8NGS5 318 aa14.02□□□□□ -0.17
COL9A2-208ENST00000488463 SLC37A2Q8TED4 501 aa14.02□□□□□ -0.17
COL9A2-208ENST00000488463 GRAMD1AQ96CP6 724 aa14.02□□□□□ -0.17
COL9A2-208ENST00000488463 LRRC40Q9H9A6 602 aa14.02□□□□□ -0.17
COL9A2-208ENST00000488463 FEZ2Q9UHY8 353 aaPredicted RBP14.02□□□□□ -0.17
COL9A2-208ENST00000488463 FKBPLQ9UIM3 349 aa14.02□□□□□ -0.17
COL9A2-208ENST00000488463 KCNK6Q9Y257 313 aa14.02□□□□□ -0.17
COL9A2-208ENST00000488463 RAXQ9Y2V3 346 aa14.02□□□□□ -0.17
COL9A2-208ENST00000488463 PKP3Q9Y446 797 aa14.02□□□□□ -0.17
COL9A2-208ENST00000488463 ATMQ13315 3056 aa14.02□□□□□ -0.17
COL9A2-208ENST00000488463 C2orf81A6NN90 581 aa14.01□□□□□ -0.17
COL9A2-208ENST00000488463 STX7O15400 261 aaKnown RBP14.01□□□□□ -0.17
COL9A2-208ENST00000488463 BRINP1O60477 761 aa14.01□□□□□ -0.17
COL9A2-208ENST00000488463 DXOO77932 396 aaKnown RBP14.01□□□□□ -0.17
COL9A2-208ENST00000488463 SUN1O94901 812 aa14.01□□□□□ -0.17
COL9A2-208ENST00000488463 FGGP02679 453 aa14.01□□□□□ -0.17
COL9A2-208ENST00000488463 HOXB3P14651 431 aaPredicted RBP14.01□□□□□ -0.17
COL9A2-208ENST00000488463 CXCR5P32302 372 aa14.01□□□□□ -0.17
COL9A2-208ENST00000488463 GPR3P46089 330 aa14.01□□□□□ -0.17
COL9A2-208ENST00000488463 LSSP48449 732 aa14.01□□□□□ -0.17
COL9A2-208ENST00000488463 CTSCP53634 463 aa14.01□□□□□ -0.17
COL9A2-208ENST00000488463 OR1D5P58170 312 aa14.01□□□□□ -0.17
COL9A2-208ENST00000488463 ZFP36L1Q07352 338 aaKnown RBP14.01□□□□□ -0.17
COL9A2-208ENST00000488463 SQSTM1Q13501 440 aa14.01□□□□□ -0.17
COL9A2-208ENST00000488463 SNX1Q13596 522 aa14.01□□□□□ -0.17
COL9A2-208ENST00000488463 SPIDRQ14159 915 aa14.01□□□□□ -0.17
COL9A2-208ENST00000488463 GPRC6AQ5T6X5 926 aa14.01□□□□□ -0.17
COL9A2-208ENST00000488463 IGF2-ASQ6U949 168 aa14.01□□□□□ -0.17
COL9A2-208ENST00000488463 XKR5Q6UX68 686 aa14.01□□□□□ -0.17
COL9A2-208ENST00000488463 SLITRK4Q8IW52 837 aa14.01□□□□□ -0.17
COL9A2-208ENST00000488463 TAB3Q8N5C8 712 aaPredicted RBP14.01□□□□□ -0.17
COL9A2-208ENST00000488463 RASGEF1AQ8N9B8 481 aa14.01□□□□□ -0.17
COL9A2-208ENST00000488463 CCDC97Q96F63 343 aaPredicted RBP14.01□□□□□ -0.17
COL9A2-208ENST00000488463 GFM1Q96RP9 751 aaKnown RBP14.01□□□□□ -0.17
COL9A2-208ENST00000488463 TIMM29Q9BSF4 260 aa14.01□□□□□ -0.17
COL9A2-208ENST00000488463 ETNK1Q9HBU6 452 aa14.01□□□□□ -0.17
COL9A2-208ENST00000488463 ASCL3Q9NQ33 180 aa14.01□□□□□ -0.17
COL9A2-208ENST00000488463 SCHIP1Q9P0W5 487 aaPredicted RBP14.01□□□□□ -0.17
COL9A2-208ENST00000488463 ATXN7L1Q9ULK2 861 aaPredicted RBP14.01□□□□□ -0.17
COL9A2-208ENST00000488463 DRG1Q9Y295 367 aaKnown RBP14.01□□□□□ -0.17
COL9A2-208ENST00000488463 PIKFYVEQ9Y2I7 2098 aa14.01□□□□□ -0.17
COL9A2-208ENST00000488463 KMOO15229 486 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms