RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 GSRP00390 522 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 GYPCP04921 128 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 CD48P09326 243 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 CCDC172P0C7W6 258 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 FAM228BP0C875 321 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 PYGMP11217 842 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 AKT2P31751 481 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 CASP14P31944 242 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 IGFALSP35858 605 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 PRKCIP41743 596 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 STAT5AP42229 794 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 ARRB1P49407 418 aaPredicted RBP5.95□□□□□ -1.46
CDHR3-213ENST00000488386 ACADVLP49748 655 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 SLC20A2Q08357 652 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 C1orf61Q13536 156 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 HNRNPDQ14103 355 aaKnown RBP5.95□□□□□ -1.46
CDHR3-213ENST00000488386 PDE1CQ14123 709 aaPredicted RBP5.95□□□□□ -1.46
CDHR3-213ENST00000488386 FZD2Q14332 565 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 PTPRRQ15256 657 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 ATP13A4Q4VNC1 1196 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 ZNF805Q5CZA5 627 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 ERMARDQ5T6L9 678 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 HES3Q5TGS1 186 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 KCTD16Q68DU8 428 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 ABHD17CQ6PCB6 329 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 GDPD4Q6W3E5 623 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 CCNI2Q6ZMN8 369 aaPredicted RBP5.95□□□□□ -1.46
CDHR3-213ENST00000488386 RFX8Q6ZV50 586 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 TTC7BQ86TV6 843 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 FAM129CQ86XR2 697 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 CAMK1DQ8IU85 385 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 ARHGAP12Q8IWW6 846 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.95□□□□□ -1.46
CDHR3-213ENST00000488386 FUBP1Q96AE4 644 aaKnown RBP5.95□□□□□ -1.46
CDHR3-213ENST00000488386 SKA1Q96BD8 255 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 GDAP1L1Q96MZ0 367 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 SMIM14Q96QK8 99 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 KLF6Q99612 283 aaPredicted RBP5.95□□□□□ -1.46
CDHR3-213ENST00000488386 NCAPGQ9BPX3 1015 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 PACSIN1Q9BY11 444 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 XPO4Q9C0E2 1151 aaKnown RBP5.95□□□□□ -1.46
CDHR3-213ENST00000488386 LRRC19Q9H756 370 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 CATSPERBQ9H7T0 1116 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 PDFQ9HBH1 243 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 CWC15Q9P013 229 aaKnown RBP5.95□□□□□ -1.46
CDHR3-213ENST00000488386 UBA2Q9UBT2 640 aaPredicted RBP5.95□□□□□ -1.46
CDHR3-213ENST00000488386 DMTF1Q9Y222 760 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 KCTD3Q9Y597 815 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 ARID1BQ8NFD5 2236 aaPredicted RBP5.95□□□□□ -1.46
CDHR3-213ENST00000488386 CHD8Q9HCK8 2581 aa5.95□□□□□ -1.46
CDHR3-213ENST00000488386 COL5A1P20908 1838 aaPredicted RBP5.95□□□□□ -1.46
CDHR3-213ENST00000488386 CACNA1BQ00975 2339 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 CELSR3Q9NYQ7 3312 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 TRABD2BA6NFA1 517 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 A6NNZ2 444 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 TMEM110-MUSTN1A8MSY1 372 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 GOLGA6L19H0YKK7 550 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 AREL1O15033 823 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 PRAMEF11O60813 436 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 RFPL3O75679 317 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 PALMO75781 387 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 PIAS2O75928 621 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 DNAJC8O75937 253 aaPredicted RBP5.94□□□□□ -1.46
CDHR3-213ENST00000488386 RNF8O76064 485 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 POP4O95707 220 aaKnown RBP5.94□□□□□ -1.46
CDHR3-213ENST00000488386 PCCBP05166 539 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 GIMD1P0DJR0 217 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 DGKAP23743 735 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 CFPP27918 469 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 SSR1P43307 286 aaKnown RBP5.94□□□□□ -1.46
CDHR3-213ENST00000488386 RXRGP48443 463 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 MAXP61244 160 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 RPS21P63220 83 aaKnown RBP5.94□□□□□ -1.46
CDHR3-213ENST00000488386 SLC10A7Q0GE19 358 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 EIF2B5Q13144 721 aaKnown RBP5.94□□□□□ -1.46
CDHR3-213ENST00000488386 IRF4Q15306 451 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 C21orf62-AS1Q17RA5 79 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 DEFB133Q30KQ1 61 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 CCDC122Q5T0U0 273 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 DENND2CQ68D51 928 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 KIAA1161Q6NSJ0 714 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 ETV3LQ6ZN32 361 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 ABI3BPQ7Z7G0 1075 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 B3GNT8Q7Z7M8 397 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 UMODL1-AS1Q8N2C9 162 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 PELI3Q8N2H9 469 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 PGBD5Q8N414 524 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 PLA2G15Q8NCC3 412 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 UHMK1Q8TAS1 419 aaKnown RBP5.94□□□□□ -1.46
CDHR3-213ENST00000488386 LMX1AQ8TE12 382 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 CXorf40AQ8TE69 158 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 ISG20Q96AZ6 181 aaKnown RBP5.94□□□□□ -1.46
CDHR3-213ENST00000488386 VCPIP1Q96JH7 1222 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 FEM1CQ96JP0 617 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 NUP85Q9BW27 656 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 CINPQ9BW66 212 aaPredicted RBP5.94□□□□□ -1.46
CDHR3-213ENST00000488386 CD244Q9BZW8 370 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 ISCUQ9H1K1 167 aa5.94□□□□□ -1.46
CDHR3-213ENST00000488386 SUDS3Q9H7L9 328 aaPredicted RBP5.94□□□□□ -1.46
CDHR3-213ENST00000488386 PCDH12Q9NPG4 1184 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms