RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 RXRGP48443 463 aa4.3□□□□□ -1.72
PTEN-204ENST00000487939 NAP1L1P55209 391 aaKnown RBP4.3□□□□□ -1.72
PTEN-204ENST00000487939 ISL1P61371 349 aa4.3□□□□□ -1.72
PTEN-204ENST00000487939 PLIN5Q00G26 463 aa4.3□□□□□ -1.72
PTEN-204ENST00000487939 CDC16Q13042 620 aa4.3□□□□□ -1.72
PTEN-204ENST00000487939 LCN10Q6JVE6 187 aa4.3□□□□□ -1.72
PTEN-204ENST00000487939 PLEKHM3Q6ZWE6 761 aa4.3□□□□□ -1.72
PTEN-204ENST00000487939 ZNF771Q7L3S4 317 aaPredicted RBP4.3□□□□□ -1.72
PTEN-204ENST00000487939 SLC9B2Q86UD5 537 aa4.3□□□□□ -1.72
PTEN-204ENST00000487939 CCDC190Q86UF4 302 aa4.3□□□□□ -1.72
PTEN-204ENST00000487939 EPHX4Q8IUS5 362 aa4.3□□□□□ -1.72
PTEN-204ENST00000487939 OR13A1Q8NGR1 328 aa4.3□□□□□ -1.72
PTEN-204ENST00000487939 HM13Q8TCT9 377 aa4.3□□□□□ -1.72
PTEN-204ENST00000487939 UTP15Q8TED0 518 aaKnown RBP4.3□□□□□ -1.72
PTEN-204ENST00000487939 TRPC4APQ8TEL6 797 aa4.3□□□□□ -1.72
PTEN-204ENST00000487939 PPP4R1Q8TF05 950 aa4.3□□□□□ -1.72
PTEN-204ENST00000487939 TMEM255BQ8WV15 326 aa4.3□□□□□ -1.72
PTEN-204ENST00000487939 DNASE2BQ8WZ79 361 aa4.3□□□□□ -1.72
PTEN-204ENST00000487939 CCDC34Q96HJ3 373 aa4.3□□□□□ -1.72
PTEN-204ENST00000487939 EGLN2Q96KS0 407 aa4.3□□□□□ -1.72
PTEN-204ENST00000487939 PCYT2Q99447 389 aa4.3□□□□□ -1.72
PTEN-204ENST00000487939 SEMA3CQ99985 751 aa4.3□□□□□ -1.72
PTEN-204ENST00000487939 C1QTNF1Q9BXJ1 281 aa4.3□□□□□ -1.72
PTEN-204ENST00000487939 MTMR10Q9NXD2 777 aa4.3□□□□□ -1.72
PTEN-204ENST00000487939 POLG2Q9UHN1 485 aa4.3□□□□□ -1.72
PTEN-204ENST00000487939 DOCK7Q96N67 2140 aa4.3□□□□□ -1.72
PTEN-204ENST00000487939 FRMD3A2A2Y4 597 aa4.29□□□□□ -1.72
PTEN-204ENST00000487939 FAM172BPA6NC97 362 aa4.29□□□□□ -1.72
PTEN-204ENST00000487939 CAPN9O14815 690 aa4.29□□□□□ -1.72
PTEN-204ENST00000487939 SMAD9O15198 467 aaKnown RBP4.29□□□□□ -1.72
PTEN-204ENST00000487939 IGLV2-11P01706 119 aa4.29□□□□□ -1.72
PTEN-204ENST00000487939 CRYAAP02489 173 aa4.29□□□□□ -1.72
PTEN-204ENST00000487939 ANXA7P20073 488 aaKnown RBP4.29□□□□□ -1.72
PTEN-204ENST00000487939 CAPN3P20807 821 aa4.29□□□□□ -1.72
PTEN-204ENST00000487939 MT3P25713 68 aa4.29□□□□□ -1.72
PTEN-204ENST00000487939 HOXA13P31271 388 aaPredicted RBP4.29□□□□□ -1.72
PTEN-204ENST00000487939 HOXA1P49639 335 aaPredicted RBP4.29□□□□□ -1.72
PTEN-204ENST00000487939 CDH8P55286 799 aa4.29□□□□□ -1.72
PTEN-204ENST00000487939 ARL16Q0P5N6 197 aa4.29□□□□□ -1.72
PTEN-204ENST00000487939 GAGE5Q13069 117 aa4.29□□□□□ -1.72
PTEN-204ENST00000487939 GAGE6Q13070 117 aa4.29□□□□□ -1.72
PTEN-204ENST00000487939 KRTCAP3Q53RY4 240 aa4.29□□□□□ -1.72
PTEN-204ENST00000487939 PDSS1Q5T2R2 415 aa4.29□□□□□ -1.72
PTEN-204ENST00000487939 NSUN5P2Q63ZY6 315 aa4.29□□□□□ -1.72
PTEN-204ENST00000487939 PMS2CLQ68D20 193 aa4.29□□□□□ -1.72
PTEN-204ENST00000487939 TMPRSS12Q86WS5 348 aa4.29□□□□□ -1.72
PTEN-204ENST00000487939 WDTC1Q8N5D0 677 aa4.29□□□□□ -1.72
PTEN-204ENST00000487939 EMC1Q8N766 993 aa4.29□□□□□ -1.72
PTEN-204ENST00000487939 DMBX1Q8NFW5 382 aa4.29□□□□□ -1.72
PTEN-204ENST00000487939 ELMOD3Q96FG2 381 aa4.29□□□□□ -1.72
PTEN-204ENST00000487939 TREX2Q9BQ50 279 aaPredicted RBP4.29□□□□□ -1.72
PTEN-204ENST00000487939 TCP11L1Q9NUJ3 509 aa4.29□□□□□ -1.72
PTEN-204ENST00000487939 SEPT11Q9NVA2 429 aaKnown RBP4.29□□□□□ -1.72
PTEN-204ENST00000487939 OGFRQ9NZT2 677 aa4.29□□□□□ -1.72
PTEN-204ENST00000487939 TMEM184BQ9Y519 407 aaPredicted RBP4.29□□□□□ -1.72
PTEN-204ENST00000487939 SCN5AQ14524 2016 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 ANKRD66B4E2M5 251 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 AP3D1O14617 1153 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 DVL1O14640 695 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 XPNPEP2O43895 674 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 FGF17O60258 216 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 TMCC2O75069 709 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 NR2F2P24468 414 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 ACADLP28330 430 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 TM4SF1P30408 202 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 CAMPP49913 170 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 MMP14P50281 582 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 GPR143P51810 404 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 CTSCP53634 463 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 DVL1P1P54792 670 aaPredicted RBP4.28□□□□□ -1.72
PTEN-204ENST00000487939 AIMP2Q13155 320 aaKnown RBP4.28□□□□□ -1.72
PTEN-204ENST00000487939 ASTE1Q2TB18 679 aaPredicted RBP4.28□□□□□ -1.72
PTEN-204ENST00000487939 OR7E24Q6IFN5 339 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 KCTD8Q6ZWB6 473 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 CHST9Q7L1S5 443 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 DSG4Q86SJ6 1040 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 NFE4Q86UQ8 179 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 PM20D2Q8IYS1 436 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 GCSAMQ8N6F7 178 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 C1orf131Q8NDD1 294 aaKnown RBP4.28□□□□□ -1.72
PTEN-204ENST00000487939 RDM1Q8NG50 284 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 SLC44A1Q8WWI5 657 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 UHRF2Q96PU4 802 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 OR2A14Q96R47 310 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 NODALQ96S42 347 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 LRMDAQ9H2I8 198 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 PLK3Q9H4B4 646 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 SMARCAD1Q9H4L7 1026 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 SYNCQ9H7C4 482 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 SETD4Q9NVD3 440 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 DBNLQ9UJU6 430 aaKnown RBP4.28□□□□□ -1.72
PTEN-204ENST00000487939 ZNF711Q9Y462 761 aa4.28□□□□□ -1.72
PTEN-204ENST00000487939 RUSC2Q8N2Y8 1516 aa4.27□□□□□ -1.73
PTEN-204ENST00000487939 ZCWPW2A0A1B0GU75 182 aa4.27□□□□□ -1.73
PTEN-204ENST00000487939 OR5K3A6NET4 321 aa4.27□□□□□ -1.73
PTEN-204ENST00000487939 C15orf62A8K5M9 175 aa4.27□□□□□ -1.73
PTEN-204ENST00000487939 EIF3DO15371 548 aaKnown RBP eCLIP4.27□□□□□ -1.73
PTEN-204ENST00000487939 KRT86O43790 486 aa4.27□□□□□ -1.73
PTEN-204ENST00000487939 LMX1BO60663 402 aa4.27□□□□□ -1.73
PTEN-204ENST00000487939 PTP4A3O75365 173 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms