RNA–Protein interactions for RNA: ENST00000487656.1

MACF1-221, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-221ENST00000487656 PHF13Q86YI8 300 aaPredicted RBP5.55□□□□□ -1.52
MACF1-221ENST00000487656 MCATQ8IVS2 390 aaKnown RBP5.55□□□□□ -1.52
MACF1-221ENST00000487656 SFTPA2Q8IWL1 248 aa5.55□□□□□ -1.52
MACF1-221ENST00000487656 NRSN1Q8IZ57 195 aa5.55□□□□□ -1.52
MACF1-221ENST00000487656 NDUFAF2Q8N183 169 aa5.55□□□□□ -1.52
MACF1-221ENST00000487656 LZTR1Q8N653 840 aa5.55□□□□□ -1.52
MACF1-221ENST00000487656 RCBTB1Q8NDN9 531 aa5.55□□□□□ -1.52
MACF1-221ENST00000487656 CCL4L1Q8NHW4 92 aa5.55□□□□□ -1.52
MACF1-221ENST00000487656 C9orf43Q8TAL5 461 aaPredicted RBP5.55□□□□□ -1.52
MACF1-221ENST00000487656 HTR3CQ8WXA8 447 aa5.55□□□□□ -1.52
MACF1-221ENST00000487656 ART4Q93070 314 aa5.55□□□□□ -1.52
MACF1-221ENST00000487656 UTP4Q969X6 686 aaKnown RBP5.55□□□□□ -1.52
MACF1-221ENST00000487656 ISL2Q96A47 359 aa5.55□□□□□ -1.52
MACF1-221ENST00000487656 ECHDC3Q96DC8 303 aa5.55□□□□□ -1.52
MACF1-221ENST00000487656 NUS1Q96E22 293 aa5.55□□□□□ -1.52
MACF1-221ENST00000487656 AHCYL2Q96HN2 611 aaKnown RBP5.55□□□□□ -1.52
MACF1-221ENST00000487656 FAM46AQ96IP4 442 aaKnown RBP5.55□□□□□ -1.52
MACF1-221ENST00000487656 CCDC74BQ96LY2 380 aa5.55□□□□□ -1.52
MACF1-221ENST00000487656 NUDT22Q9BRQ3 303 aa5.55□□□□□ -1.52
MACF1-221ENST00000487656 CNPY3Q9BT09 278 aa5.55□□□□□ -1.52
MACF1-221ENST00000487656 LGR4Q9BXB1 951 aa5.55□□□□□ -1.52
MACF1-221ENST00000487656 TEX101Q9BY14 249 aa5.55□□□□□ -1.52
MACF1-221ENST00000487656 SLC39A8Q9C0K1 460 aa5.55□□□□□ -1.52
MACF1-221ENST00000487656 TRIT1Q9H3H1 467 aaKnown RBP5.55□□□□□ -1.52
MACF1-221ENST00000487656 LRRC19Q9H756 370 aa5.55□□□□□ -1.52
MACF1-221ENST00000487656 SUDS3Q9H7L9 328 aaPredicted RBP5.55□□□□□ -1.52
MACF1-221ENST00000487656 GPN2Q9H9Y4 310 aaPredicted RBP5.55□□□□□ -1.52
MACF1-221ENST00000487656 SP110Q9HB58 689 aa5.55□□□□□ -1.52
MACF1-221ENST00000487656 PDFQ9HBH1 243 aa5.55□□□□□ -1.52
MACF1-221ENST00000487656 NLRC4Q9NPP4 1024 aa5.55□□□□□ -1.52
MACF1-221ENST00000487656 SEPT11Q9NVA2 429 aaKnown RBP5.55□□□□□ -1.52
MACF1-221ENST00000487656 TAAR2Q9P1P5 351 aa5.55□□□□□ -1.52
MACF1-221ENST00000487656 KLHL3Q9UH77 587 aa5.55□□□□□ -1.52
MACF1-221ENST00000487656 NEU3Q9UQ49 428 aa5.55□□□□□ -1.52
MACF1-221ENST00000487656 B3GALT1Q9Y5Z6 326 aa5.55□□□□□ -1.52
MACF1-221ENST00000487656 IGHV1OR21-1A0A087WYE8 117 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 GOLGA6CA6NDK9 693 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 GOLGA6BA6NDN3 693 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 DFFAO00273 331 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 SMAD7O15105 426 aaKnown RBP5.54□□□□□ -1.52
MACF1-221ENST00000487656 PPM1DO15297 605 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 CCP110O43303 1012 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 RAD1O60671 282 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 RNF8O76064 485 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 CEACAM5P06731 702 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 PYGLP06737 847 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 GOLGA6DP0CG33 693 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 LIFP15018 202 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 RAB6AP20340 208 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 AK4P27144 223 aaPredicted RBP5.54□□□□□ -1.52
MACF1-221ENST00000487656 HSPA9P38646 679 aaKnown RBP5.54□□□□□ -1.52
MACF1-221ENST00000487656 ADCY8P40145 1251 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 CASRP41180 1078 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 ZNF135P52742 658 aaPredicted RBP5.54□□□□□ -1.52
MACF1-221ENST00000487656 RPL7AP62424 266 aaKnown RBP5.54□□□□□ -1.52
MACF1-221ENST00000487656 CDK3Q00526 305 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 IL10RBQ08334 325 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 PTP4A2Q12974 167 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 PPP2R5EQ16537 467 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 CLEC16AQ2KHT3 1053 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 ERMARDQ5T6L9 678 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 NKAIN2Q5VXU1 208 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 DENND2CQ68D51 928 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 KCTD16Q68DU8 428 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 PPP1R2P3Q6NXS1 205 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 SLC30A9Q6PML9 568 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 CEACAM20Q6UY09 585 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 KDELC2Q7Z4H8 507 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 HEATR4Q86WZ0 1026 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 LSRQ86X29 649 aaPredicted RBP5.54□□□□□ -1.52
MACF1-221ENST00000487656 FAM129CQ86XR2 697 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 NRROSQ86YC3 692 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 NLGN4XQ8N0W4 816 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 NAGSQ8N159 534 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 BBS5Q8N3I7 341 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 FAM13CQ8NE31 585 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 ANKRD20A12PQ8NF67 263 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 NLGN4YQ8NFZ3 816 aaPredicted RBP5.54□□□□□ -1.52
MACF1-221ENST00000487656 OR10G6Q8NH81 332 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 PDCD6IPQ8WUM4 868 aaKnown RBP5.54□□□□□ -1.52
MACF1-221ENST00000487656 NSMCE1Q8WV22 266 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 APOBEC4Q8WW27 367 aaKnown RBP5.54□□□□□ -1.52
MACF1-221ENST00000487656 SH3KBP1Q96B97 665 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 CELF6Q96J87 481 aaKnown RBP5.54□□□□□ -1.52
MACF1-221ENST00000487656 SLC45A3Q96JT2 553 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 COQ10AQ96MF6 247 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 ZNF599Q96NL3 588 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 MCEEQ96PE7 176 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 PCDHB18PQ96TA0 734 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 SLC38A3Q99624 504 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 TM9SF2Q99805 663 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 ZPBPQ9BS86 351 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 TRIM55Q9BYV6 548 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 FRMD8Q9BZ67 464 aaPredicted RBP5.54□□□□□ -1.52
MACF1-221ENST00000487656 VPS16Q9H269 839 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 DHX35Q9H5Z1 703 aaKnown RBP5.54□□□□□ -1.52
MACF1-221ENST00000487656 LRRC4CQ9HCJ2 640 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 FBXO8Q9NRD0 319 aa5.54□□□□□ -1.52
MACF1-221ENST00000487656 FAM207AQ9NSI2 230 aaPredicted RBP5.54□□□□□ -1.52
MACF1-221ENST00000487656 SAMSN1Q9NSI8 373 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms