RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 FAM153AQ9UHL3 310 aa12.3□□□□□ -0.44
SREBF1-215ENST00000487401 ALG6Q9Y672 507 aa12.3□□□□□ -0.44
SREBF1-215ENST00000487401 KMOO15229 486 aa12.29□□□□□ -0.44
SREBF1-215ENST00000487401 VEGFDO43915 354 aa12.29□□□□□ -0.44
SREBF1-215ENST00000487401 ZRANB2O95218 330 aaKnown RBP eCLIP12.29□□□□□ -0.44
SREBF1-215ENST00000487401 ITGB2P05107 769 aa12.29□□□□□ -0.44
SREBF1-215ENST00000487401 BPIP17213 487 aa12.29□□□□□ -0.44
SREBF1-215ENST00000487401 EPHA4P54764 986 aa12.29□□□□□ -0.44
SREBF1-215ENST00000487401 WNT3AP56704 352 aa12.29□□□□□ -0.44
SREBF1-215ENST00000487401 RAB15P59190 212 aa12.29□□□□□ -0.44
SREBF1-215ENST00000487401 TBX2Q13207 712 aaPredicted RBP12.29□□□□□ -0.44
SREBF1-215ENST00000487401 SPA17Q15506 151 aa12.29□□□□□ -0.44
SREBF1-215ENST00000487401 TAZQ16635 292 aa12.29□□□□□ -0.44
SREBF1-215ENST00000487401 INSCQ1MX18 579 aa12.29□□□□□ -0.44
SREBF1-215ENST00000487401 CRTC3Q6UUV7 619 aa12.29□□□□□ -0.44
SREBF1-215ENST00000487401 LRRTM4Q86VH4 590 aa12.29□□□□□ -0.44
SREBF1-215ENST00000487401 CCDC50Q8IVM0 306 aa12.29□□□□□ -0.44
SREBF1-215ENST00000487401 TRIM48Q8IWZ4 208 aa12.29□□□□□ -0.44
SREBF1-215ENST00000487401 RCOR2Q8IZ40 523 aa12.29□□□□□ -0.44
SREBF1-215ENST00000487401 IL22RA1Q8N6P7 574 aa12.29□□□□□ -0.44
SREBF1-215ENST00000487401 TRIM5Q9C035 493 aa12.29□□□□□ -0.44
SREBF1-215ENST00000487401 EPB41L1Q9H4G0 881 aa12.29□□□□□ -0.44
SREBF1-215ENST00000487401 TRABDQ9H4I3 376 aa12.29□□□□□ -0.44
SREBF1-215ENST00000487401 BPIFA1Q9NP55 256 aa12.29□□□□□ -0.44
SREBF1-215ENST00000487401 LUC7LQ9NQ29 371 aaKnown RBP12.29□□□□□ -0.44
SREBF1-215ENST00000487401 OCIAD1Q9NX40 245 aa12.29□□□□□ -0.44
SREBF1-215ENST00000487401 KLHL8Q9P2G9 620 aaPredicted RBP12.29□□□□□ -0.44
SREBF1-215ENST00000487401 NFKBIL1Q9UBC1 381 aaPredicted RBP12.29□□□□□ -0.44
SREBF1-215ENST00000487401 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.29□□□□□ -0.44
SREBF1-215ENST00000487401 PCDHGA4Q9Y5G9 962 aa12.29□□□□□ -0.44
SREBF1-215ENST00000487401 B3GALT1Q9Y5Z6 326 aa12.29□□□□□ -0.44
SREBF1-215ENST00000487401 PTPRQQ9UMZ3 2332 aa12.29□□□□□ -0.44
SREBF1-215ENST00000487401 MGAQ8IWI9 3026 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 A6NCN8 305 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 PDZK1P1A8MUH7 402 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 B8ZZF3 427 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 MTX2O75431 263 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 CDK14O94921 469 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 VIPP01282 170 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 PECAM1P16284 738 aaPredicted RBP12.28□□□□□ -0.44
SREBF1-215ENST00000487401 ZNF7P17097 686 aaPredicted RBP12.28□□□□□ -0.44
SREBF1-215ENST00000487401 VCLP18206 1134 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 MC2RQ01718 297 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 WASHC5Q12768 1159 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 GTF2H3Q13889 308 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 PLA2G4EQ3MJ16 856 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 TFDP3Q5H9I0 405 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 CCDC181Q5TID7 509 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 PID1Q7Z2X4 250 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 ZC3H18Q86VM9 953 aaKnown RBP12.28□□□□□ -0.44
SREBF1-215ENST00000487401 PLXDC1Q8IUK5 500 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 SLC25A41Q8N5S1 370 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 GDAP1Q8TB36 358 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 EXTL1Q92935 676 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 NKD1Q969G9 470 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 PMEPA1Q969W9 287 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 RBM41Q96IZ5 413 aaKnown RBP12.28□□□□□ -0.44
SREBF1-215ENST00000487401 TTC25Q96NG3 672 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 PLEKHG4BQ96PX9 1271 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 TEFMQ96QE5 360 aaKnown RBP12.28□□□□□ -0.44
SREBF1-215ENST00000487401 TBC1D10AQ9BXI6 508 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 SLC23A2Q9UGH3 650 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 KLHL3Q9UH77 587 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 DNAJC16Q9Y2G8 782 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 PCDHA13Q9Y5I0 950 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 SPO11Q9Y5K1 396 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 MYLKQ15746 1914 aa12.28□□□□□ -0.44
SREBF1-215ENST00000487401 LOC285095A0A1B0GVY8 99 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 HACD1B0YJ81 288 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 F5H423 210 aaPredicted RBP12.27□□□□□ -0.45
SREBF1-215ENST00000487401 J3QKU1 62 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 AURKAO14965 403 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 CHUKO15111 745 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 EPOP01588 193 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 SFTPCP11686 197 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 AMD1P17707 334 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 XRCC1P18887 633 aaPredicted RBP12.27□□□□□ -0.45
SREBF1-215ENST00000487401 NFKB1P19838 968 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 IDSP22304 550 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 CD68P34810 354 aaPredicted RBP12.27□□□□□ -0.45
SREBF1-215ENST00000487401 UGT1A3P35503 534 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 HADHBP55084 474 aaKnown RBP12.27□□□□□ -0.45
SREBF1-215ENST00000487401 UBE2IP63279 158 aaKnown RBP12.27□□□□□ -0.45
SREBF1-215ENST00000487401 GSE1Q14687 1217 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 SEPT7Q16181 437 aaKnown RBP12.27□□□□□ -0.45
SREBF1-215ENST00000487401 TBR1Q16650 682 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 LINC00303Q3SY05 128 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 SIRPB2Q5JXA9 342 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 ZDHHC20Q5W0Z9 365 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 ANKS6Q68DC2 871 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 KDELC1Q6UW63 502 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 CEACAM20Q6UY09 585 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 ARHGAP22Q7Z5H3 698 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 CCDC170Q8IYT3 715 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 KATNAL2Q8IYT4 538 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 CACNA2D3Q8IZS8 1091 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 EXD3Q8N9H8 876 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 BRSK1Q8TDC3 778 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 HTR3CQ8WXA8 447 aa12.27□□□□□ -0.45
SREBF1-215ENST00000487401 HAUS1Q96CS2 278 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms