RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 KIF9Q9HAQ2 790 aa4.2□□□□□ -1.74
SNRNP40-205ENST00000486941 PARVGQ9HBI0 331 aa4.2□□□□□ -1.74
SNRNP40-205ENST00000486941 HPS4Q9NQG7 708 aa4.2□□□□□ -1.74
SNRNP40-205ENST00000486941 AASDHPPTQ9NRN7 309 aa4.2□□□□□ -1.74
SNRNP40-205ENST00000486941 VPS45Q9NRW7 570 aa4.2□□□□□ -1.74
SNRNP40-205ENST00000486941 POT1Q9NUX5 634 aa4.2□□□□□ -1.74
SNRNP40-205ENST00000486941 DPP3Q9NY33 737 aa4.2□□□□□ -1.74
SNRNP40-205ENST00000486941 CPNE7Q9UBL6 633 aa4.2□□□□□ -1.74
SNRNP40-205ENST00000486941 SLC8A2Q9UPR5 921 aa4.2□□□□□ -1.74
SNRNP40-205ENST00000486941 KIF3AQ9Y496 699 aa4.2□□□□□ -1.74
SNRNP40-205ENST00000486941 STYXL1Q9Y6J8 313 aa4.2□□□□□ -1.74
SNRNP40-205ENST00000486941 HELZP42694 1942 aaKnown RBP4.2□□□□□ -1.74
SNRNP40-205ENST00000486941 IGF2RP11717 2491 aa4.2□□□□□ -1.74
SNRNP40-205ENST00000486941 BAHCC1Q9P281 2608 aa4.2□□□□□ -1.74
SNRNP40-205ENST00000486941 ZFYVE26Q68DK2 2539 aa4.2□□□□□ -1.74
SNRNP40-205ENST00000486941 A0A1W2PPL8 197 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 BCLAF3A2AJT9 711 aaKnown RBP4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 KPNA7A9QM74 516 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 ANKRD63C9JTQ0 380 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 K7ENM7 598 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 M0R3H8 397 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 PSMD9O00233 223 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 PRAMEF2O60811 474 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 TUSC2O75896 110 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 RHOBTB1O94844 696 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 IL18RAPO95256 599 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 KCNK5O95279 499 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 EGFP01133 1207 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 MBPP02686 304 aaPredicted RBP4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 KRT18P05783 430 aaKnown RBP4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 CSH1P0DML2 217 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 CSH2P0DML3 217 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 NMT1P30419 496 aaKnown RBP4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 DDIT3P35638 169 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 UBA7P41226 1012 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 PNPLA4P41247 253 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 ACOT2P49753 483 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 ITGA8P53708 1063 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 RPL10AP62906 217 aaKnown RBP4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 BFSP1Q12934 665 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 KCNB1Q14721 858 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 MFSD13AQ14CX5 517 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 KARSQ15046 597 aaKnown RBP4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 POSTNQ15063 836 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 ELF2Q15723 593 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 WSCD1Q658N2 575 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 TXNDC8Q6A555 127 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 NPNTQ6UXI9 565 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 COLCA1Q6ZS62 124 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 SYT13Q7L8C5 426 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 ZNF720Q7Z2F6 126 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 GPBP1Q86WP2 473 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 CHPFQ8IZ52 775 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 ARFGAP1Q8N6T3 406 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 MAB21L3Q8N8X9 362 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 ZBTB34Q8NCN2 500 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 SPATA18Q8TC71 538 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 MRPS31Q92665 395 aaKnown RBP4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 PRR11Q96HE9 360 aaPredicted RBP4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 LRGUKQ96M69 825 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 ZNF560Q96MR9 790 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 FIZ1Q96SL8 496 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 P2RY13Q9BPV8 354 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 ACBD6Q9BR61 282 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 TMEM206Q9H813 350 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 ECT2Q9H8V3 914 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 FBRSL1Q9HCM7 1045 aaKnown RBP4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 RXFP3Q9NSD7 469 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 BLOC1S4Q9NUP1 217 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 SEMA5BQ9P283 1151 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 UXTQ9UBK9 157 aaPredicted RBP4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 AGO2Q9UKV8 859 aaKnown RBP4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 RIMKLBQ9ULI2 386 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 USP22Q9UPT9 525 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 CCL26Q9Y258 94 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 HS3ST3B1Q9Y662 390 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 KNL1Q8NG31 2342 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 PLXND1Q9Y4D7 1925 aa4.19□□□□□ -1.74
SNRNP40-205ENST00000486941 MYH10P35580 1976 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 KNTC1P50748 2209 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 CABIN1Q9Y6J0 2220 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 PKD1L2Q7Z442 2459 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 CFAP47Q6ZTR5 3102 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 ANKRD11Q6UB99 2663 aaPredicted RBP4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 TRAV19A0A0A6YYK7 116 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 FAM90A8PA6NJQ4 464 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 C4orf47A7E2U8 309 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 B4DGG1 531 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 H3BQV1 296 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 RRP9O43818 475 aaKnown RBP4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 HUS1O60921 280 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 TBCAO75347 108 aaKnown RBP4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 NOL4O94818 638 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 APBB3O95704 486 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 CAVIN2O95810 425 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 LDHAP00338 332 aaKnown RBP4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 PROS1P07225 676 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 FAM90A13PP0C7W8 464 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 FAM90A24PP0C7X0 464 aa4.18□□□□□ -1.74
SNRNP40-205ENST00000486941 ARSAP15289 507 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms