RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 PIM3Q86V86 326 aa12.74□□□□□ -0.37
CHMP3-208ENST00000486404 LRRTM4Q86VH4 590 aa12.74□□□□□ -0.37
CHMP3-208ENST00000486404 JAMLQ86YT9 394 aa12.74□□□□□ -0.37
CHMP3-208ENST00000486404 TRAPPC5Q8IUR0 188 aa12.74□□□□□ -0.37
CHMP3-208ENST00000486404 FBXO39Q8N4B4 442 aa12.74□□□□□ -0.37
CHMP3-208ENST00000486404 TTC30BQ8N4P2 665 aa12.74□□□□□ -0.37
CHMP3-208ENST00000486404 AVL9Q8NBF6 648 aa12.74□□□□□ -0.37
CHMP3-208ENST00000486404 KCNE4Q8WWG9 221 aa12.74□□□□□ -0.37
CHMP3-208ENST00000486404 AHCYL2Q96HN2 611 aaKnown RBP12.74□□□□□ -0.37
CHMP3-208ENST00000486404 NAF1Q96HR8 494 aaKnown RBP12.74□□□□□ -0.37
CHMP3-208ENST00000486404 TTC25Q96NG3 672 aa12.74□□□□□ -0.37
CHMP3-208ENST00000486404 VPS35Q96QK1 796 aa12.74□□□□□ -0.37
CHMP3-208ENST00000486404 SLC38A3Q99624 504 aa12.74□□□□□ -0.37
CHMP3-208ENST00000486404 APOL2Q9BQE5 337 aa12.74□□□□□ -0.37
CHMP3-208ENST00000486404 TRIM39Q9HCM9 518 aa12.74□□□□□ -0.37
CHMP3-208ENST00000486404 KLC4Q9NSK0 619 aa12.74□□□□□ -0.37
CHMP3-208ENST00000486404 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.74□□□□□ -0.37
CHMP3-208ENST00000486404 LOXL2Q9Y4K0 774 aa12.74□□□□□ -0.37
CHMP3-208ENST00000486404 ST14Q9Y5Y6 855 aa12.74□□□□□ -0.37
CHMP3-208ENST00000486404 ADGRG1Q9Y653 693 aa12.74□□□□□ -0.37
CHMP3-208ENST00000486404 CFAP47Q6ZTR5 3102 aa12.74□□□□□ -0.37
CHMP3-208ENST00000486404 C2orf81A6NN90 581 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 PDZK1P1A8MUH7 402 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 AGRPO00253 132 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 DDX3YO15523 660 aaKnown RBP12.73□□□□□ -0.37
CHMP3-208ENST00000486404 BUD23O43709 281 aaKnown RBP12.73□□□□□ -0.37
CHMP3-208ENST00000486404 DUX1O43812 170 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 VEGFDO43915 354 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 MTX2O75431 263 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 TNFSF15O95150 251 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 AGTP01019 485 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 ITGA2BP08514 1039 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 CCDC175P0C221 793 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 VCLP18206 1134 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 AKT1P31749 480 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 GPR3P46089 330 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 B4GALNT1Q00973 533 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 HHEXQ03014 270 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 NR1D2Q14995 579 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 CLPPQ16740 277 aaPredicted RBP12.73□□□□□ -0.37
CHMP3-208ENST00000486404 P3H1Q32P28 736 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 ATP13A5Q4VNC0 1218 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 BROXQ5VW32 411 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 IGF2-ASQ6U949 168 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 ADGRG6Q86SQ4 1221 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 C17orf82Q86X59 251 aaPredicted RBP12.73□□□□□ -0.37
CHMP3-208ENST00000486404 TRIM48Q8IWZ4 208 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 SFRP1Q8N474 314 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 FAM71DQ8N9W8 422 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 OR10G6Q8NH81 332 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 HES6Q96HZ4 224 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 CMKLR1Q99788 373 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 TBL1YQ9BQ87 522 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 RDH14Q9HBH5 336 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 ASCL3Q9NQ33 180 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 WDR70Q9NW82 654 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 PISDQ9UG56 409 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 PCYT1BQ9Y5K3 369 aaPredicted RBP12.73□□□□□ -0.37
CHMP3-208ENST00000486404 ZFYVE26Q68DK2 2539 aa12.73□□□□□ -0.37
CHMP3-208ENST00000486404 TRBV23OR9-2A0A075B6M9 112 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 KIR2DS5A0A0G2JLQ3 304 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 A0A0G2JNG1 304 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 PMS2P1A4D2B8 440 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 KIR2DS3K7RE56 304 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 KMOO15229 486 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 CDK14O94921 469 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 PRAMEF1O95521 474 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 CRTAMO95727 393 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 F3P13726 295 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 LPOP22079 712 aaPredicted RBP12.72□□□□□ -0.37
CHMP3-208ENST00000486404 UGT1A5P35504 534 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 MAPK9P45984 424 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 FASLGP48023 281 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 GPLD1P80108 840 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 PDE1BQ01064 536 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 NFATC2Q13469 925 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 KIR2DS5Q14953 304 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 TAF1AQ15573 450 aaPredicted RBP12.72□□□□□ -0.37
CHMP3-208ENST00000486404 SEPT7Q16181 437 aaKnown RBP12.72□□□□□ -0.37
CHMP3-208ENST00000486404 LDLRAP1Q5SW96 308 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 SLC9B2Q86UD5 537 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 PDZD3Q86UT5 571 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 ZNF761Q86XN6 746 aaPredicted RBP12.72□□□□□ -0.37
CHMP3-208ENST00000486404 BRSK1Q8TDC3 778 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 TMEM159Q96B96 161 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 SH3KBP1Q96B97 665 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 CCDC97Q96F63 343 aaPredicted RBP12.72□□□□□ -0.37
CHMP3-208ENST00000486404 SLC46A1Q96NT5 459 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 GORASP1Q9BQQ3 440 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 NUDT22Q9BRQ3 303 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 TIMM29Q9BSF4 260 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 LRRC40Q9H9A6 602 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 IL26Q9NPH9 171 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 LZTFL1Q9NQ48 299 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.72□□□□□ -0.37
CHMP3-208ENST00000486404 IL17CQ9P0M4 197 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 TBC1D29Q9UFV1 150 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 RALYQ9UKM9 306 aaKnown RBP12.72□□□□□ -0.37
CHMP3-208ENST00000486404 DNAJC16Q9Y2G8 782 aa12.72□□□□□ -0.37
CHMP3-208ENST00000486404 ARL5AQ9Y689 179 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms