RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 ENDOVQ8N8Q3 282 aaKnown RBP8.13□□□□□ -1.11
XRN1-212ENST00000486211 SLC38A9Q8NBW4 561 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 FNIP1Q8TF40 1166 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 MR1Q95460 341 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 SGSM3Q96HU1 749 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 TUBGCP5Q96RT8 1024 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.13□□□□□ -1.11
XRN1-212ENST00000486211 STN1Q9H668 368 aaKnown RBP8.13□□□□□ -1.11
XRN1-212ENST00000486211 UCK1Q9HA47 277 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 SEMA5BQ9P283 1151 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 CPNE7Q9UBL6 633 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 ZNHIT2Q9UHR6 403 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 RARRES3Q9UL19 164 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 SNX7Q9UNH6 387 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 TMEM98Q9Y2Y6 226 aa8.13□□□□□ -1.11
XRN1-212ENST00000486211 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.13□□□□□ -1.11
XRN1-212ENST00000486211 FAM72CH0Y354 149 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 PMM2O15305 246 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 MED7O43513 233 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 JRKO75564 520 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 RASSF9O75901 435 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 TYRP1P17643 537 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 ETV3P41162 512 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 RGRP47804 291 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 FMO5P49326 533 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 TDGF1P3P51864 188 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 OTUD4Q01804 1114 aaKnown RBP8.12□□□□□ -1.11
XRN1-212ENST00000486211 NRG1Q02297 640 aaPredicted RBP8.12□□□□□ -1.11
XRN1-212ENST00000486211 LTBQ06643 244 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 KCNAB1Q14722 419 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 CNGA3Q16281 694 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 SLC25A52Q3SY17 297 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 PTPN20Q4JDL3 420 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 CFAP58Q5T655 872 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 FAM72AQ5TYM5 149 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 CACHD1Q5VU97 1274 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 RESP18Q5W5W9 173 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 ZNF324BQ6AW86 544 aaPredicted RBP8.12□□□□□ -1.11
XRN1-212ENST00000486211 FAM72DQ6L9T8 149 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 TRNP1Q6NT89 227 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 SPOCD1Q6ZMY3 1216 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 CXXC5Q7LFL8 322 aaKnown RBP8.12□□□□□ -1.11
XRN1-212ENST00000486211 FAM72BQ86X60 149 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 FAM131BQ86XD5 332 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 CEP57L1Q8IYX8 460 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 DTD2Q96FN9 168 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 SLC41A2Q96JW4 573 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 NSMCE3Q96MG7 304 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 AGAP3Q96P47 875 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 WDR77Q9BQA1 342 aaPredicted RBP8.12□□□□□ -1.11
XRN1-212ENST00000486211 HERPUD2Q9BSE4 406 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 NLNQ9BYT8 704 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 MAGEB5Q9BZ81 275 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 ALG2Q9H553 416 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 RETREG1Q9H6L5 497 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 PDE7BQ9NP56 450 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 WASH6PQ9NQA3 447 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.12□□□□□ -1.11
XRN1-212ENST00000486211 SUCOQ9UBS9 1254 aaKnown RBP8.12□□□□□ -1.11
XRN1-212ENST00000486211 B4GALT6Q9UBX8 382 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 CNOT8Q9UFF9 292 aaKnown RBP8.12□□□□□ -1.11
XRN1-212ENST00000486211 STAP1Q9ULZ2 295 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 PCDHGB6Q9Y5F9 930 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 NCOA6Q14686 2063 aaPredicted RBP8.12□□□□□ -1.11
XRN1-212ENST00000486211 STAB1Q9NY15 2570 aa8.12□□□□□ -1.11
XRN1-212ENST00000486211 NSD1Q96L73 2696 aaPredicted RBP8.11□□□□□ -1.11
XRN1-212ENST00000486211 IGHV5-51A0A0C4DH38 117 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 KIR2DS5A0A0G2JLQ3 304 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 A0A0G2JNG1 304 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 KIR2DS3K7RE56 304 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 TRAFD1O14545 582 aaPredicted RBP8.11□□□□□ -1.11
XRN1-212ENST00000486211 PCDH17O14917 1159 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 CETN3O15182 167 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 SLC16A3O15427 465 aaKnown RBP8.11□□□□□ -1.11
XRN1-212ENST00000486211 CPNE3O75131 537 aaKnown RBP8.11□□□□□ -1.11
XRN1-212ENST00000486211 IPO13O94829 963 aaKnown RBP8.11□□□□□ -1.11
XRN1-212ENST00000486211 UBXN7O94888 489 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 C8BP07358 591 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 KRT5P13647 590 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 F3P13726 295 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 SYT1P21579 422 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 GNA15P30679 374 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 ADORA2A-AS1P86434 159 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 PDE1BQ01064 536 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 Q0VFX4 171 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 FOXD4Q12950 439 aaPredicted RBP8.11□□□□□ -1.11
XRN1-212ENST00000486211 KIR2DS5Q14953 304 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 RABEP1Q15276 862 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 PLEKHS1Q5SXH7 462 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 RAET1GQ6H3X3 334 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 PLEKHA7Q6IQ23 1121 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 CYB5D1Q6P9G0 228 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 XKRXQ6PP77 449 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 FAM198BQ6UWH4 519 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 LINC00114Q6XXX2 140 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 CERS6Q6ZMG9 384 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 TMEM26Q6ZUK4 368 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 MARK2Q7KZI7 788 aaKnown RBP8.11□□□□□ -1.11
XRN1-212ENST00000486211 TAOK1Q7L7X3 1001 aa8.11□□□□□ -1.11
XRN1-212ENST00000486211 HSD11B1LQ7Z5J1 315 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms