RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 TRAF3Q13114 568 aa6.03□□□□□ -1.44
RTN4-214ENST00000486085 NAB2Q15742 525 aa6.03□□□□□ -1.44
RTN4-214ENST00000486085 MEA1Q16626 185 aa6.03□□□□□ -1.44
RTN4-214ENST00000486085 CFAP161Q6P656 301 aa6.03□□□□□ -1.44
RTN4-214ENST00000486085 TMEM154Q6P9G4 183 aa6.03□□□□□ -1.44
RTN4-214ENST00000486085 GLDNQ6ZMI3 551 aaPredicted RBP6.03□□□□□ -1.44
RTN4-214ENST00000486085 TAOK1Q7L7X3 1001 aa6.03□□□□□ -1.44
RTN4-214ENST00000486085 FASTKD5Q7L8L6 764 aaKnown RBP6.03□□□□□ -1.44
RTN4-214ENST00000486085 WASF1Q92558 559 aa6.03□□□□□ -1.44
RTN4-214ENST00000486085 PLEKHF1Q96S99 279 aa6.03□□□□□ -1.44
RTN4-214ENST00000486085 NCAPGQ9BPX3 1015 aa6.03□□□□□ -1.44
RTN4-214ENST00000486085 PCGF1Q9BSM1 259 aa6.03□□□□□ -1.44
RTN4-214ENST00000486085 SMARCAD1Q9H4L7 1026 aa6.03□□□□□ -1.44
RTN4-214ENST00000486085 TBC1D29Q9UFV1 150 aa6.03□□□□□ -1.44
RTN4-214ENST00000486085 TTC7AQ9ULT0 858 aaPredicted RBP6.03□□□□□ -1.44
RTN4-214ENST00000486085 GPR34Q9UPC5 381 aa6.03□□□□□ -1.44
RTN4-214ENST00000486085 R3HDM2Q9Y2K5 976 aaKnown RBP6.03□□□□□ -1.44
RTN4-214ENST00000486085 TNFRSF18Q9Y5U5 241 aa6.03□□□□□ -1.44
RTN4-214ENST00000486085 THSD7AQ9UPZ6 1657 aa6.03□□□□□ -1.44
RTN4-214ENST00000486085 ATXN2Q99700 1313 aaKnown RBP6.02□□□□□ -1.45
RTN4-214ENST00000486085 VILLO15195 856 aa6.02□□□□□ -1.45
RTN4-214ENST00000486085 HTATSF1O43719 755 aaKnown RBP6.02□□□□□ -1.45
RTN4-214ENST00000486085 NDUFS7O75251 213 aa6.02□□□□□ -1.45
RTN4-214ENST00000486085 ACAA1P09110 424 aaPredicted RBP6.02□□□□□ -1.45
RTN4-214ENST00000486085 MCM3P25205 808 aa6.02□□□□□ -1.45
RTN4-214ENST00000486085 SSTR2P30874 369 aa6.02□□□□□ -1.45
RTN4-214ENST00000486085 HOXD13P35453 343 aa6.02□□□□□ -1.45
RTN4-214ENST00000486085 UBA7P41226 1012 aa6.02□□□□□ -1.45
RTN4-214ENST00000486085 HTR6P50406 440 aa6.02□□□□□ -1.45
RTN4-214ENST00000486085 CDH8P55286 799 aa6.02□□□□□ -1.45
RTN4-214ENST00000486085 BNC1Q01954 994 aa6.02□□□□□ -1.45
RTN4-214ENST00000486085 DDR1Q08345 913 aa6.02□□□□□ -1.45
RTN4-214ENST00000486085 PPP6R3Q5H9R7 873 aaPredicted RBP6.02□□□□□ -1.45
RTN4-214ENST00000486085 EFHC1Q5JVL4 640 aa6.02□□□□□ -1.45
RTN4-214ENST00000486085 PAPPA-AS1Q5QFB9 102 aa6.02□□□□□ -1.45
RTN4-214ENST00000486085 SPATA1Q5VX52 437 aa6.02□□□□□ -1.45
RTN4-214ENST00000486085 C8orf82Q6P1X6 216 aaPredicted RBP6.02□□□□□ -1.45
RTN4-214ENST00000486085 DLK2Q6UY11 383 aa6.02□□□□□ -1.45
RTN4-214ENST00000486085 SLC36A4Q6YBV0 504 aa6.02□□□□□ -1.45
RTN4-214ENST00000486085 CHST9Q7L1S5 443 aa6.02□□□□□ -1.45
RTN4-214ENST00000486085 PCGF5Q86SE9 256 aa6.02□□□□□ -1.45
RTN4-214ENST00000486085 UNC5CLQ8IV45 518 aa6.02□□□□□ -1.45
RTN4-214ENST00000486085 TMED6Q8WW62 240 aa6.02□□□□□ -1.45
RTN4-214ENST00000486085 SGCDQ92629 289 aa6.02□□□□□ -1.45
RTN4-214ENST00000486085 ACOX2Q99424 681 aa6.02□□□□□ -1.45
RTN4-214ENST00000486085 SEZ6LQ9BYH1 1024 aa6.02□□□□□ -1.45
RTN4-214ENST00000486085 NOX4Q9NPH5 578 aa6.02□□□□□ -1.45
RTN4-214ENST00000486085 VPS28Q9UK41 221 aa6.02□□□□□ -1.45
RTN4-214ENST00000486085 SNX9Q9Y5X1 595 aa6.02□□□□□ -1.45
RTN4-214ENST00000486085 RGPD5Q99666 1765 aa6.02□□□□□ -1.45
RTN4-214ENST00000486085 LRRC37A3O60309 1634 aa6.01□□□□□ -1.45
RTN4-214ENST00000486085 IGLV5-52A0A0A0MRZ9 124 aa6.01□□□□□ -1.45
RTN4-214ENST00000486085 HCRTR2O43614 444 aa6.01□□□□□ -1.45
RTN4-214ENST00000486085 OR2C1O95371 312 aa6.01□□□□□ -1.45
RTN4-214ENST00000486085 GARSP41250 739 aaKnown RBP6.01□□□□□ -1.45
RTN4-214ENST00000486085 RAD23BP54727 409 aa6.01□□□□□ -1.45
RTN4-214ENST00000486085 MC1RQ01726 317 aa6.01□□□□□ -1.45
RTN4-214ENST00000486085 CREB5Q02930 508 aa6.01□□□□□ -1.45
RTN4-214ENST00000486085 TRAF2Q12933 501 aa6.01□□□□□ -1.45
RTN4-214ENST00000486085 DHX34Q14147 1143 aaKnown RBP6.01□□□□□ -1.45
RTN4-214ENST00000486085 AMZ1Q400G9 498 aa6.01□□□□□ -1.45
RTN4-214ENST00000486085 CCDC184Q52MB2 194 aa6.01□□□□□ -1.45
RTN4-214ENST00000486085 XKR9Q5GH70 373 aa6.01□□□□□ -1.45
RTN4-214ENST00000486085 LRIF1Q5T3J3 769 aa6.01□□□□□ -1.45
RTN4-214ENST00000486085 CLEC4GQ6UXB4 293 aa6.01□□□□□ -1.45
RTN4-214ENST00000486085 SEPT14Q6ZU15 432 aa6.01□□□□□ -1.45
RTN4-214ENST00000486085 DPPA4Q7L190 304 aa6.01□□□□□ -1.45
RTN4-214ENST00000486085 FOXRED2Q8IWF2 684 aa6.01□□□□□ -1.45
RTN4-214ENST00000486085 TEX11Q8IYF3 940 aa6.01□□□□□ -1.45
RTN4-214ENST00000486085 CLIP4Q8N3C7 705 aa6.01□□□□□ -1.45
RTN4-214ENST00000486085 IQCF1Q8N6M8 205 aa6.01□□□□□ -1.45
RTN4-214ENST00000486085 Q8N9P0 234 aaPredicted RBP6.01□□□□□ -1.45
RTN4-214ENST00000486085 FAM216AQ8WUB2 273 aa6.01□□□□□ -1.45
RTN4-214ENST00000486085 CSF3RQ99062 836 aa6.01□□□□□ -1.45
RTN4-214ENST00000486085 SH3GL2Q99962 352 aa6.01□□□□□ -1.45
RTN4-214ENST00000486085 C17orf75Q9HAS0 396 aa6.01□□□□□ -1.45
RTN4-214ENST00000486085 ADD3Q9UEY8 706 aaKnown RBP6.01□□□□□ -1.45
RTN4-214ENST00000486085 SESN1Q9Y6P5 492 aa6.01□□□□□ -1.45
RTN4-214ENST00000486085 MRC1P22897 1456 aa6.01□□□□□ -1.45
RTN4-214ENST00000486085 TNS2Q63HR2 1409 aa6□□□□□ -1.45
RTN4-214ENST00000486085 H3BQ06 376 aaPredicted RBP6□□□□□ -1.45
RTN4-214ENST00000486085 SOCS6O14544 535 aa6□□□□□ -1.45
RTN4-214ENST00000486085 SCAMP1O15126 338 aa6□□□□□ -1.45
RTN4-214ENST00000486085 JRKO75564 520 aa6□□□□□ -1.45
RTN4-214ENST00000486085 SNHG28P0DPA3 235 aa6□□□□□ -1.45
RTN4-214ENST00000486085 DDX5P17844 614 aaKnown RBP6□□□□□ -1.45
RTN4-214ENST00000486085 ALOX12P18054 663 aa6□□□□□ -1.45
RTN4-214ENST00000486085 PDE1CQ14123 709 aaPredicted RBP6□□□□□ -1.45
RTN4-214ENST00000486085 WDR43Q15061 677 aaKnown RBP eCLIP6□□□□□ -1.45
RTN4-214ENST00000486085 ADIPOQQ15848 244 aa6□□□□□ -1.45
RTN4-214ENST00000486085 HLFQ16534 295 aa6□□□□□ -1.45
RTN4-214ENST00000486085 FAM69BQ5VUD6 431 aa6□□□□□ -1.45
RTN4-214ENST00000486085 ZNF772Q68DY9 489 aaPredicted RBP6□□□□□ -1.45
RTN4-214ENST00000486085 KIAA0930Q6ICG6 404 aaPredicted RBP6□□□□□ -1.45
RTN4-214ENST00000486085 WDR73Q6P4I2 378 aa6□□□□□ -1.45
RTN4-214ENST00000486085 TICAM1Q8IUC6 712 aa6□□□□□ -1.45
RTN4-214ENST00000486085 ADGRF2Q8IZF7 708 aa6□□□□□ -1.45
RTN4-214ENST00000486085 PGBD5Q8N414 524 aa6□□□□□ -1.45
RTN4-214ENST00000486085 ELP5Q8TE02 316 aa6□□□□□ -1.45
RTN4-214ENST00000486085 NEUROG1Q92886 237 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms