RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 TBC1D29Q9UFV1 150 aa19.32■□□□□ 0.68
SNX5-213ENST00000486039 CCDC187A0A096LP49 1063 aa19.31■□□□□ 0.68
SNX5-213ENST00000486039 GPR89AB7ZAQ6 455 aa19.31■□□□□ 0.68
SNX5-213ENST00000486039 GAPDHSO14556 408 aaPredicted RBP19.31■□□□□ 0.68
SNX5-213ENST00000486039 GPR89BP0CG08 455 aa19.31■□□□□ 0.68
SNX5-213ENST00000486039 ALDH4A1P30038 563 aa19.31■□□□□ 0.68
SNX5-213ENST00000486039 CCKBRP32239 447 aa19.31■□□□□ 0.68
SNX5-213ENST00000486039 SPAM1P38567 509 aa19.31■□□□□ 0.68
SNX5-213ENST00000486039 ZFP36L1Q07352 338 aaKnown RBP19.31■□□□□ 0.68
SNX5-213ENST00000486039 CHRNA6Q15825 494 aa19.31■□□□□ 0.68
SNX5-213ENST00000486039 ZDHHC20Q5W0Z9 365 aa19.31■□□□□ 0.68
SNX5-213ENST00000486039 FOXR1Q6PIV2 292 aa19.31■□□□□ 0.68
SNX5-213ENST00000486039 IGF2-ASQ6U949 168 aa19.31■□□□□ 0.68
SNX5-213ENST00000486039 FAM151BQ6UXP7 276 aa19.31■□□□□ 0.68
SNX5-213ENST00000486039 KLHDC8BQ8IXV7 354 aa19.31■□□□□ 0.68
SNX5-213ENST00000486039 SFRP1Q8N474 314 aa19.31■□□□□ 0.68
SNX5-213ENST00000486039 FAM71DQ8N9W8 422 aa19.31■□□□□ 0.68
SNX5-213ENST00000486039 SLC37A2Q8TED4 501 aa19.31■□□□□ 0.68
SNX5-213ENST00000486039 SLC46A1Q96NT5 459 aa19.31■□□□□ 0.68
SNX5-213ENST00000486039 EPB41L5Q9HCM4 733 aa19.31■□□□□ 0.68
SNX5-213ENST00000486039 SLC23A2Q9UGH3 650 aa19.31■□□□□ 0.68
SNX5-213ENST00000486039 PCDHGA8Q9Y5G5 932 aa19.31■□□□□ 0.68
SNX5-213ENST00000486039 ARL5AQ9Y689 179 aa19.31■□□□□ 0.68
SNX5-213ENST00000486039 SMG1Q96Q15 3661 aaKnown RBP19.3■□□□□ 0.68
SNX5-213ENST00000486039 A6NCN8 305 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 GPR39O43194 453 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 UGT1A9O60656 530 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 ZNF189O75820 626 aaPredicted RBP19.3■□□□□ 0.68
SNX5-213ENST00000486039 METTL18O95568 372 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 UGT1A6P19224 532 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 UGT1A1P22309 533 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 UGT1A4P22310 534 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 UGT1A3P35503 534 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 UGT1A5P35504 534 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 GPR3P46089 330 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 FASLGP48023 281 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 CCZ1BP86790 482 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 CCZ1P86791 482 aaPredicted RBP19.3■□□□□ 0.68
SNX5-213ENST00000486039 BIRC2Q13490 618 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 SPARCL1Q14515 664 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 AMZ1Q400G9 498 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 DENND5AQ6IQ26 1287 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 IYDQ6PHW0 289 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 CRTC3Q6UUV7 619 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 ZNF547Q8IVP9 402 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 SLITRK4Q8IW52 837 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 SPACA3Q8IXA5 215 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 ZNF248Q8NDW4 579 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 TMEM74Q96NL1 305 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 FCRL3Q96P31 734 aaPredicted RBP19.3■□□□□ 0.68
SNX5-213ENST00000486039 TMEM121Q9BTD3 319 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 UGT1A7Q9HAW7 530 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 UGT1A10Q9HAW8 530 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 UGT1A8Q9HAW9 530 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 RDH14Q9HBH5 336 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 KLC4Q9NSK0 619 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 PKP3Q9Y446 797 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 KCTD3Q9Y597 815 aa19.3■□□□□ 0.68
SNX5-213ENST00000486039 FASNP49327 2511 aaKnown RBP19.29■□□□□ 0.68
SNX5-213ENST00000486039 GLYATL1P3A0A0U1RQE8 302 aa19.29■□□□□ 0.68
SNX5-213ENST00000486039 TMX2-CTNND1H3BSU7 103 aa19.29■□□□□ 0.68
SNX5-213ENST00000486039 VEGFDO43915 354 aa19.29■□□□□ 0.68
SNX5-213ENST00000486039 SNX2O60749 519 aa19.29■□□□□ 0.68
SNX5-213ENST00000486039 CDK14O94921 469 aa19.29■□□□□ 0.68
SNX5-213ENST00000486039 CD1CP29017 333 aa19.29■□□□□ 0.68
SNX5-213ENST00000486039 CLCNKAP51800 687 aa19.29■□□□□ 0.68
SNX5-213ENST00000486039 PCBP4P57723 403 aaKnown RBP19.29■□□□□ 0.68
SNX5-213ENST00000486039 ERVPABLB-1P60509 514 aa19.29■□□□□ 0.68
SNX5-213ENST00000486039 TLE3Q04726 772 aa19.29■□□□□ 0.68
SNX5-213ENST00000486039 TMEM115Q12893 351 aaPredicted RBP19.29■□□□□ 0.68
SNX5-213ENST00000486039 TAF1AQ15573 450 aaPredicted RBP19.29■□□□□ 0.68
SNX5-213ENST00000486039 PARP6Q2NL67 630 aa19.29■□□□□ 0.68
SNX5-213ENST00000486039 PLA2G4EQ3MJ16 856 aa19.29■□□□□ 0.68
SNX5-213ENST00000486039 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.29■□□□□ 0.68
SNX5-213ENST00000486039 MEI1Q5TIA1 1274 aa19.29■□□□□ 0.68
SNX5-213ENST00000486039 KCTD11Q693B1 232 aa19.29■□□□□ 0.68
SNX5-213ENST00000486039 ZNF662Q6ZS27 426 aa19.29■□□□□ 0.68
SNX5-213ENST00000486039 ARHGEF18Q6ZSZ5 1173 aa19.29■□□□□ 0.68
SNX5-213ENST00000486039 USP53Q70EK8 1073 aa19.29■□□□□ 0.68
SNX5-213ENST00000486039 ATG4AQ8WYN0 398 aa19.29■□□□□ 0.68
SNX5-213ENST00000486039 TBL1YQ9BQ87 522 aa19.29■□□□□ 0.68
SNX5-213ENST00000486039 STRADBQ9C0K7 418 aa19.29■□□□□ 0.68
SNX5-213ENST00000486039 SEMA6CQ9H3T2 930 aa19.29■□□□□ 0.68
SNX5-213ENST00000486039 LZTFL1Q9NQ48 299 aa19.29■□□□□ 0.68
SNX5-213ENST00000486039 PRDM8Q9NQV8 689 aa19.29■□□□□ 0.68
SNX5-213ENST00000486039 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.29■□□□□ 0.68
SNX5-213ENST00000486039 IGHV1OR21-1A0A087WYE8 117 aa19.28■□□□□ 0.68
SNX5-213ENST00000486039 KMOO15229 486 aa19.28■□□□□ 0.68
SNX5-213ENST00000486039 STX7O15400 261 aaKnown RBP19.28■□□□□ 0.68
SNX5-213ENST00000486039 PPFIA2O75334 1257 aa19.28■□□□□ 0.68
SNX5-213ENST00000486039 CPNE6O95741 557 aa19.28■□□□□ 0.68
SNX5-213ENST00000486039 CCDC175P0C221 793 aa19.28■□□□□ 0.68
SNX5-213ENST00000486039 F3P13726 295 aa19.28■□□□□ 0.68
SNX5-213ENST00000486039 HGFP14210 728 aa19.28■□□□□ 0.68
SNX5-213ENST00000486039 ZNF7P17097 686 aaPredicted RBP19.28■□□□□ 0.68
SNX5-213ENST00000486039 LPOP22079 712 aaPredicted RBP19.28■□□□□ 0.68
SNX5-213ENST00000486039 RBMS1P29558 406 aaKnown RBP19.28■□□□□ 0.68
SNX5-213ENST00000486039 EIF3IQ13347 325 aaKnown RBP19.28■□□□□ 0.68
SNX5-213ENST00000486039 SEL1L2Q5TEA6 688 aa19.28■□□□□ 0.68
SNX5-213ENST00000486039 NKAIN2Q5VXU1 208 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms