RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.71■□□□□ 0.75
COL6A2-208ENST00000485591 RHOXF2Q9BQY4 288 aa19.71■□□□□ 0.75
COL6A2-208ENST00000485591 RMI1Q9H9A7 625 aa19.71■□□□□ 0.75
COL6A2-208ENST00000485591 CYP4F12Q9HCS2 524 aa19.71■□□□□ 0.75
COL6A2-208ENST00000485591 ARFGAP3Q9NP61 516 aa19.71■□□□□ 0.75
COL6A2-208ENST00000485591 CATSPERZQ9NTU4 200 aa19.71■□□□□ 0.75
COL6A2-208ENST00000485591 ATXN10Q9UBB4 475 aa19.71■□□□□ 0.75
COL6A2-208ENST00000485591 APOBEC3BQ9UH17 382 aaKnown RBP19.71■□□□□ 0.75
COL6A2-208ENST00000485591 FAM169AQ9Y6X4 670 aa19.71■□□□□ 0.75
COL6A2-208ENST00000485591 ZFC3H1O60293 1989 aaKnown RBP19.7■□□□□ 0.74
COL6A2-208ENST00000485591 DNAJC6O75061 913 aa19.7■□□□□ 0.74
COL6A2-208ENST00000485591 MTX2O75431 263 aa19.7■□□□□ 0.74
COL6A2-208ENST00000485591 TNFP01375 233 aa19.7■□□□□ 0.74
COL6A2-208ENST00000485591 FUCA1P04066 466 aa19.7■□□□□ 0.74
COL6A2-208ENST00000485591 PRSS56P0CW18 603 aa19.7■□□□□ 0.74
COL6A2-208ENST00000485591 ACRV1P26436 265 aa19.7■□□□□ 0.74
COL6A2-208ENST00000485591 ARCN1P48444 511 aaKnown RBP19.7■□□□□ 0.74
COL6A2-208ENST00000485591 TUBB4BP68371 445 aa19.7■□□□□ 0.74
COL6A2-208ENST00000485591 CUL1Q13616 776 aa19.7■□□□□ 0.74
COL6A2-208ENST00000485591 CRYMQ14894 314 aa19.7■□□□□ 0.74
COL6A2-208ENST00000485591 FASTKD3Q14CZ7 662 aaKnown RBP19.7■□□□□ 0.74
COL6A2-208ENST00000485591 FASTKD1Q53R41 847 aaKnown RBP19.7■□□□□ 0.74
COL6A2-208ENST00000485591 SPANXN3Q5MJ09 141 aa19.7■□□□□ 0.74
COL6A2-208ENST00000485591 HP1BP3Q5SSJ5 553 aaPredicted RBP19.7■□□□□ 0.74
COL6A2-208ENST00000485591 ZNF648Q5T619 568 aaPredicted RBP19.7■□□□□ 0.74
COL6A2-208ENST00000485591 SERPINA9Q86WD7 417 aa19.7■□□□□ 0.74
COL6A2-208ENST00000485591 IFT20Q8IY31 132 aa19.7■□□□□ 0.74
COL6A2-208ENST00000485591 RBFAQ8N0V3 343 aa19.7■□□□□ 0.74
COL6A2-208ENST00000485591 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.7■□□□□ 0.74
COL6A2-208ENST00000485591 HEXDCQ8WVB3 486 aa19.7■□□□□ 0.74
COL6A2-208ENST00000485591 SLC13A1Q9BZW2 595 aa19.7■□□□□ 0.74
COL6A2-208ENST00000485591 OR2AG1Q9H205 316 aa19.7■□□□□ 0.74
COL6A2-208ENST00000485591 TM7SF3Q9NS93 570 aa19.7■□□□□ 0.74
COL6A2-208ENST00000485591 ZDHHC3Q9NYG2 299 aa19.7■□□□□ 0.74
COL6A2-208ENST00000485591 ZC3H7BQ9UGR2 993 aaKnown RBP19.7■□□□□ 0.74
COL6A2-208ENST00000485591 MOSPD1Q9UJG1 213 aa19.7■□□□□ 0.74
COL6A2-208ENST00000485591 SUFUQ9UMX1 484 aa19.7■□□□□ 0.74
COL6A2-208ENST00000485591 KNL1Q8NG31 2342 aa19.7■□□□□ 0.74
COL6A2-208ENST00000485591 IGLV3-16A0A075B6K0 115 aa19.69■□□□□ 0.74
COL6A2-208ENST00000485591 CHUKO15111 745 aa19.69■□□□□ 0.74
COL6A2-208ENST00000485591 NUAK1O60285 661 aa19.69■□□□□ 0.74
COL6A2-208ENST00000485591 PIAS2O75928 621 aa19.69■□□□□ 0.74
COL6A2-208ENST00000485591 ZNF8P17098 575 aaPredicted RBP19.69■□□□□ 0.74
COL6A2-208ENST00000485591 ECHS1P30084 290 aa19.69■□□□□ 0.74
COL6A2-208ENST00000485591 AKT1P31749 480 aa19.69■□□□□ 0.74
COL6A2-208ENST00000485591 TMEM115Q12893 351 aaPredicted RBP19.69■□□□□ 0.74
COL6A2-208ENST00000485591 HLTFQ14527 1009 aaKnown RBP eCLIP19.69■□□□□ 0.74
COL6A2-208ENST00000485591 ITIH4Q14624 930 aa19.69■□□□□ 0.74
COL6A2-208ENST00000485591 LONRF1Q17RB8 773 aa19.69■□□□□ 0.74
COL6A2-208ENST00000485591 AARS2Q5JTZ9 985 aaKnown RBP19.69■□□□□ 0.74
COL6A2-208ENST00000485591 LYPLAL1Q5VWZ2 237 aa19.69■□□□□ 0.74
COL6A2-208ENST00000485591 STEAP4Q687X5 459 aa19.69■□□□□ 0.74
COL6A2-208ENST00000485591 CERS6Q6ZMG9 384 aa19.69■□□□□ 0.74
COL6A2-208ENST00000485591 MARK2Q7KZI7 788 aaKnown RBP19.69■□□□□ 0.74
COL6A2-208ENST00000485591 TAS2R42Q7RTR8 314 aa19.69■□□□□ 0.74
COL6A2-208ENST00000485591 RD3Q7Z3Z2 195 aa19.69■□□□□ 0.74
COL6A2-208ENST00000485591 ANKMY2Q8IV38 441 aa19.69■□□□□ 0.74
COL6A2-208ENST00000485591 ZBED8Q8IZ13 594 aa19.69■□□□□ 0.74
COL6A2-208ENST00000485591 FBXO36Q8NEA4 188 aa19.69■□□□□ 0.74
COL6A2-208ENST00000485591 IFT81Q8WYA0 676 aa19.69■□□□□ 0.74
COL6A2-208ENST00000485591 TTC25Q96NG3 672 aa19.69■□□□□ 0.74
COL6A2-208ENST00000485591 COPS8Q99627 209 aa19.69■□□□□ 0.74
COL6A2-208ENST00000485591 LRRC61Q9BV99 259 aa19.69■□□□□ 0.74
COL6A2-208ENST00000485591 TCEAL2Q9H3H9 227 aaPredicted RBP19.69■□□□□ 0.74
COL6A2-208ENST00000485591 CARS2Q9HA77 564 aaKnown RBP19.69■□□□□ 0.74
COL6A2-208ENST00000485591 PLAC1Q9HBJ0 212 aa19.69■□□□□ 0.74
COL6A2-208ENST00000485591 SAYSD1Q9NPB0 183 aa19.69■□□□□ 0.74
COL6A2-208ENST00000485591 MTRF1LQ9UGC7 380 aaKnown RBP19.69■□□□□ 0.74
COL6A2-208ENST00000485591 PCDHGB2Q9Y5G2 931 aa19.69■□□□□ 0.74
COL6A2-208ENST00000485591 ZFHX2Q9C0A1 2572 aaPredicted RBP19.68■□□□□ 0.74
COL6A2-208ENST00000485591 FAM186AA6NE01 2351 aa19.68■□□□□ 0.74
COL6A2-208ENST00000485591 CD3EAPO15446 510 aaKnown RBP19.68■□□□□ 0.74
COL6A2-208ENST00000485591 PCDHGA12O60330 932 aa19.68■□□□□ 0.74
COL6A2-208ENST00000485591 GDF9O60383 454 aa19.68■□□□□ 0.74
COL6A2-208ENST00000485591 CDK14O94921 469 aa19.68■□□□□ 0.74
COL6A2-208ENST00000485591 MSH3P20585 1137 aa19.68■□□□□ 0.74
COL6A2-208ENST00000485591 GNPDA1P46926 289 aa19.68■□□□□ 0.74
COL6A2-208ENST00000485591 LIMK1P53667 647 aa19.68■□□□□ 0.74
COL6A2-208ENST00000485591 IL9RQ01113 521 aa19.68■□□□□ 0.74
COL6A2-208ENST00000485591 GTF2H3Q13889 308 aa19.68■□□□□ 0.74
COL6A2-208ENST00000485591 SEMA3AQ14563 771 aa19.68■□□□□ 0.74
COL6A2-208ENST00000485591 DBN1Q16643 649 aa19.68■□□□□ 0.74
COL6A2-208ENST00000485591 PYCR3Q53H96 274 aa19.68■□□□□ 0.74
COL6A2-208ENST00000485591 UNC5AQ6ZN44 842 aa19.68■□□□□ 0.74
COL6A2-208ENST00000485591 KANSL1Q7Z3B3 1105 aa19.68■□□□□ 0.74
COL6A2-208ENST00000485591 GALNT13Q8IUC8 556 aa19.68■□□□□ 0.74
COL6A2-208ENST00000485591 KIAA2013Q8IYS2 634 aa19.68■□□□□ 0.74
COL6A2-208ENST00000485591 ZNF548Q8NEK5 533 aaPredicted RBP19.68■□□□□ 0.74
COL6A2-208ENST00000485591 SAP25Q8TEE9 199 aa19.68■□□□□ 0.74
COL6A2-208ENST00000485591 CFAP36Q96G28 342 aa19.68■□□□□ 0.74
COL6A2-208ENST00000485591 OR2M4Q96R27 311 aa19.68■□□□□ 0.74
COL6A2-208ENST00000485591 TTC1Q99614 292 aa19.68■□□□□ 0.74
COL6A2-208ENST00000485591 CAAP1Q9H8G2 361 aa19.68■□□□□ 0.74
COL6A2-208ENST00000485591 TRNAU1APQ9NX07 287 aaKnown RBP19.68■□□□□ 0.74
COL6A2-208ENST00000485591 MARCH4Q9P2E8 410 aaPredicted RBP19.68■□□□□ 0.74
COL6A2-208ENST00000485591 SPASTQ9UBP0 616 aa19.68■□□□□ 0.74
COL6A2-208ENST00000485591 EP300Q09472 2414 aaPredicted RBP19.68■□□□□ 0.74
COL6A2-208ENST00000485591 BPTFQ12830 3046 aa19.68■□□□□ 0.74
COL6A2-208ENST00000485591 CFAP99D6REC4 459 aa19.67■□□□□ 0.74
COL6A2-208ENST00000485591 SDC3O75056 442 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms