RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 MTX2O75431 263 aa12.12□□□□□ -0.47
TRA2B-213ENST00000485530 MC4RP32245 332 aa12.12□□□□□ -0.47
TRA2B-213ENST00000485530 ELK3P41970 407 aa12.12□□□□□ -0.47
TRA2B-213ENST00000485530 DPP6P42658 865 aa12.12□□□□□ -0.47
TRA2B-213ENST00000485530 PDE1BQ01064 536 aa12.12□□□□□ -0.47
TRA2B-213ENST00000485530 OVGP1Q12889 678 aa12.12□□□□□ -0.47
TRA2B-213ENST00000485530 SEMA3AQ14563 771 aa12.12□□□□□ -0.47
TRA2B-213ENST00000485530 NFATC4Q14934 902 aa12.12□□□□□ -0.47
TRA2B-213ENST00000485530 TEAD4Q15561 434 aa12.12□□□□□ -0.47
TRA2B-213ENST00000485530 ALG11Q2TAA5 492 aa12.12□□□□□ -0.47
TRA2B-213ENST00000485530 BBS9Q3SYG4 887 aa12.12□□□□□ -0.47
TRA2B-213ENST00000485530 BBOF1Q8ND07 529 aa12.12□□□□□ -0.47
TRA2B-213ENST00000485530 GLYATL1Q969I3 302 aa12.12□□□□□ -0.47
TRA2B-213ENST00000485530 TSACCQ96A04 125 aaPredicted RBP12.12□□□□□ -0.47
TRA2B-213ENST00000485530 HIC2Q96JB3 615 aa12.12□□□□□ -0.47
TRA2B-213ENST00000485530 EBNA1BP2Q99848 306 aaKnown RBP12.12□□□□□ -0.47
TRA2B-213ENST00000485530 ZSCAN5AQ9BUG6 496 aa12.12□□□□□ -0.47
TRA2B-213ENST00000485530 FRMD8Q9BZ67 464 aaPredicted RBP12.12□□□□□ -0.47
TRA2B-213ENST00000485530 CCDC86Q9H6F5 360 aaKnown RBP12.12□□□□□ -0.47
TRA2B-213ENST00000485530 WDR26Q9H7D7 661 aa12.12□□□□□ -0.47
TRA2B-213ENST00000485530 MRM3Q9HC36 420 aaKnown RBP12.12□□□□□ -0.47
TRA2B-213ENST00000485530 FGF22Q9HCT0 170 aa12.12□□□□□ -0.47
TRA2B-213ENST00000485530 GDF3Q9NR23 364 aa12.12□□□□□ -0.47
TRA2B-213ENST00000485530 RAD18Q9NS91 495 aa12.12□□□□□ -0.47
TRA2B-213ENST00000485530 IL1RAPL1Q9NZN1 696 aa12.12□□□□□ -0.47
TRA2B-213ENST00000485530 MARCH4Q9P2E8 410 aaPredicted RBP12.12□□□□□ -0.47
TRA2B-213ENST00000485530 ST14Q9Y5Y6 855 aa12.12□□□□□ -0.47
TRA2B-213ENST00000485530 TRBV5-4A0A0C4DH59 114 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 FAM237BA0A1B0GVD1 139 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 MAGEB16A2A368 324 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 GOLGA8KD6RF30 607 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 GOLGA8TH3BQL2 631 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 SMAPO00193 183 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 TOR1BO14657 336 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 SCAMP1O15126 338 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 PRAMEF1O95521 474 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 GOT2P00505 430 aaKnown RBP12.11□□□□□ -0.47
TRA2B-213ENST00000485530 MYCLP1P12525 358 aaPredicted RBP12.11□□□□□ -0.47
TRA2B-213ENST00000485530 FOXN2P32314 431 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 HADHAP40939 763 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 C21orf59P57076 290 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 KIAA1024LP59773 190 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 B4GALNT1Q00973 533 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 BNIP3Q12983 259 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 NFATC2Q13469 925 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 SMAD1Q15797 465 aaKnown RBP12.11□□□□□ -0.47
TRA2B-213ENST00000485530 HIF1AQ16665 826 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 ZDHHC20Q5W0Z9 365 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 ENPP7Q6UWV6 458 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 NLRP9Q7RTR0 991 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 ADGRG6Q86SQ4 1221 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 DCP2Q8IU60 420 aaKnown RBP12.11□□□□□ -0.47
TRA2B-213ENST00000485530 ANKMY2Q8IV38 441 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 PDIK1LQ8N165 341 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 PPHLN1Q8NEY8 458 aaKnown RBP12.11□□□□□ -0.47
TRA2B-213ENST00000485530 FAM174AQ8TBP5 190 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 HNRNPLLQ8WVV9 542 aaKnown RBP12.11□□□□□ -0.47
TRA2B-213ENST00000485530 STAMBPL1Q96FJ0 436 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 SCARF2Q96GP6 870 aaPredicted RBP12.11□□□□□ -0.47
TRA2B-213ENST00000485530 VPS35Q96QK1 796 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 GTPBP2Q9BX10 602 aaKnown RBP12.11□□□□□ -0.47
TRA2B-213ENST00000485530 ASB8Q9H765 288 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 ERVMER34-1Q9H9K5 563 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 ATXN10Q9UBB4 475 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 APPL1Q9UKG1 709 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 SLC17A4Q9Y2C5 497 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 PLEKHM1Q9Y4G2 1056 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 MAD1L1Q9Y6D9 718 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 ACACAQ13085 2346 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 ADAMTS9Q9P2N4 1935 aa12.11□□□□□ -0.47
TRA2B-213ENST00000485530 SCN8AQ9UQD0 1980 aa12.1□□□□□ -0.47
TRA2B-213ENST00000485530 PI4KAP42356 2102 aa12.1□□□□□ -0.47
TRA2B-213ENST00000485530 EIF4E1BA6NMX2 242 aaKnown RBP12.1□□□□□ -0.47
TRA2B-213ENST00000485530 SGTAO43765 313 aa12.1□□□□□ -0.47
TRA2B-213ENST00000485530 DNAJC6O75061 913 aa12.1□□□□□ -0.47
TRA2B-213ENST00000485530 SLC25A14O95258 325 aaPredicted RBP12.1□□□□□ -0.47
TRA2B-213ENST00000485530 VAPBO95292 243 aa12.1□□□□□ -0.47
TRA2B-213ENST00000485530 CSF2P04141 144 aa12.1□□□□□ -0.47
TRA2B-213ENST00000485530 F7P08709 466 aaPredicted RBP12.1□□□□□ -0.47
TRA2B-213ENST00000485530 CD59P13987 128 aa12.1□□□□□ -0.47
TRA2B-213ENST00000485530 RXRGP48443 463 aa12.1□□□□□ -0.47
TRA2B-213ENST00000485530 THOP1P52888 689 aa12.1□□□□□ -0.47
TRA2B-213ENST00000485530 ATXN3P54252 364 aaPredicted RBP12.1□□□□□ -0.47
TRA2B-213ENST00000485530 ARL4CP56559 192 aa12.1□□□□□ -0.47
TRA2B-213ENST00000485530 SRP54P61011 504 aaKnown RBP12.1□□□□□ -0.47
TRA2B-213ENST00000485530 PDIA2Q13087 525 aaKnown RBP12.1□□□□□ -0.47
TRA2B-213ENST00000485530 CALCOCO2Q13137 446 aa12.1□□□□□ -0.47
TRA2B-213ENST00000485530 LAMB3Q13751 1172 aa12.1□□□□□ -0.47
TRA2B-213ENST00000485530 UBAP2Q5T6F2 1119 aaKnown RBP12.1□□□□□ -0.47
TRA2B-213ENST00000485530 GPRC6AQ5T6X5 926 aa12.1□□□□□ -0.47
TRA2B-213ENST00000485530 PDPK2PQ6A1A2 396 aa12.1□□□□□ -0.47
TRA2B-213ENST00000485530 CASC4Q6P4E1 433 aa12.1□□□□□ -0.47
TRA2B-213ENST00000485530 CCNI2Q6ZMN8 369 aaPredicted RBP12.1□□□□□ -0.47
TRA2B-213ENST00000485530 MACC1Q6ZN28 852 aa12.1□□□□□ -0.47
TRA2B-213ENST00000485530 KANSL1Q7Z3B3 1105 aa12.1□□□□□ -0.47
TRA2B-213ENST00000485530 RABEPKQ7Z6M1 372 aa12.1□□□□□ -0.47
TRA2B-213ENST00000485530 LDB1Q86U70 411 aaPredicted RBP12.1□□□□□ -0.47
TRA2B-213ENST00000485530 RBFAQ8N0V3 343 aa12.1□□□□□ -0.47
TRA2B-213ENST00000485530 SLC25A45Q8N413 288 aa12.1□□□□□ -0.47
TRA2B-213ENST00000485530 MINDY1Q8N5J2 469 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms