RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 ZFC3H1O60293 1989 aaKnown RBP18.9■□□□□ 0.62
SNX17-206ENST00000484886 TPRP12270 2363 aaKnown RBP18.9■□□□□ 0.62
SNX17-206ENST00000484886 TRBV23OR9-2A0A075B6M9 112 aa18.9■□□□□ 0.62
SNX17-206ENST00000484886 CCDC78A2IDD5 438 aa18.9■□□□□ 0.62
SNX17-206ENST00000484886 CCL22O00626 93 aa18.9■□□□□ 0.62
SNX17-206ENST00000484886 KMOO15229 486 aa18.9■□□□□ 0.62
SNX17-206ENST00000484886 CSO75390 466 aaKnown RBP18.9■□□□□ 0.62
SNX17-206ENST00000484886 APRTP07741 180 aa18.9■□□□□ 0.62
SNX17-206ENST00000484886 GLB1P16278 677 aa18.9■□□□□ 0.62
SNX17-206ENST00000484886 HADHAP40939 763 aa18.9■□□□□ 0.62
SNX17-206ENST00000484886 ZNF140P52738 457 aaPredicted RBP18.9■□□□□ 0.62
SNX17-206ENST00000484886 CDH17Q12864 832 aa18.9■□□□□ 0.62
SNX17-206ENST00000484886 TMEM115Q12893 351 aaPredicted RBP18.9■□□□□ 0.62
SNX17-206ENST00000484886 SEMA5AQ13591 1074 aa18.9■□□□□ 0.62
SNX17-206ENST00000484886 SPIDRQ14159 915 aa18.9■□□□□ 0.62
SNX17-206ENST00000484886 HLTFQ14527 1009 aaKnown RBP eCLIP18.9■□□□□ 0.62
SNX17-206ENST00000484886 KHDC1Q4VXA5 237 aaKnown RBP18.9■□□□□ 0.62
SNX17-206ENST00000484886 RBM44Q6ZP01 1051 aaKnown RBP18.9■□□□□ 0.62
SNX17-206ENST00000484886 RASGEF1CQ8N431 466 aa18.9■□□□□ 0.62
SNX17-206ENST00000484886 DCBLD1Q8N8Z6 715 aa18.9■□□□□ 0.62
SNX17-206ENST00000484886 PRELID2Q8N945 189 aa18.9■□□□□ 0.62
SNX17-206ENST00000484886 WDR48Q8TAF3 677 aa18.9■□□□□ 0.62
SNX17-206ENST00000484886 DTX3LQ8TDB6 740 aa18.9■□□□□ 0.62
SNX17-206ENST00000484886 COG1Q8WTW3 980 aa18.9■□□□□ 0.62
SNX17-206ENST00000484886 PATE1Q8WXA2 126 aa18.9■□□□□ 0.62
SNX17-206ENST00000484886 DNAJC1Q96KC8 554 aaKnown RBP18.9■□□□□ 0.62
SNX17-206ENST00000484886 ASB8Q9H765 288 aa18.9■□□□□ 0.62
SNX17-206ENST00000484886 KLC4Q9NSK0 619 aa18.9■□□□□ 0.62
SNX17-206ENST00000484886 SMARCAL1Q9NZC9 954 aa18.9■□□□□ 0.62
SNX17-206ENST00000484886 RABGEF1Q9UJ41 708 aa18.9■□□□□ 0.62
SNX17-206ENST00000484886 CRLS1Q9UJA2 301 aa18.9■□□□□ 0.62
SNX17-206ENST00000484886 MYLKQ15746 1914 aa18.9■□□□□ 0.62
SNX17-206ENST00000484886 RP1P56715 2156 aa18.89■□□□□ 0.62
SNX17-206ENST00000484886 ZNF106Q9H2Y7 1883 aaKnown RBP18.89■□□□□ 0.61
SNX17-206ENST00000484886 TRABD2BA6NFA1 517 aa18.89■□□□□ 0.61
SNX17-206ENST00000484886 GAPDHSO14556 408 aaPredicted RBP18.89■□□□□ 0.61
SNX17-206ENST00000484886 LDB2O43679 373 aa18.89■□□□□ 0.61
SNX17-206ENST00000484886 SRP72O76094 671 aaKnown RBP18.89■□□□□ 0.61
SNX17-206ENST00000484886 RPLP0P05388 317 aaKnown RBP18.89■□□□□ 0.61
SNX17-206ENST00000484886 MSH3P20585 1137 aa18.89■□□□□ 0.61
SNX17-206ENST00000484886 ITGALP20701 1170 aa18.89■□□□□ 0.61
SNX17-206ENST00000484886 PPM1FP49593 454 aaPredicted RBP18.89■□□□□ 0.61
SNX17-206ENST00000484886 GNG11P61952 73 aa18.89■□□□□ 0.61
SNX17-206ENST00000484886 MSLNQ13421 630 aaPredicted RBP18.89■□□□□ 0.61
SNX17-206ENST00000484886 TRIP13Q15645 432 aaPredicted RBP18.89■□□□□ 0.61
SNX17-206ENST00000484886 GPRC6AQ5T6X5 926 aa18.89■□□□□ 0.61
SNX17-206ENST00000484886 C4orf22Q6V702 233 aa18.89■□□□□ 0.61
SNX17-206ENST00000484886 CCNJLQ8IV13 435 aa18.89■□□□□ 0.61
SNX17-206ENST00000484886 NAGSQ8N159 534 aa18.89■□□□□ 0.61
SNX17-206ENST00000484886 ARL14Q8N4G2 192 aa18.89■□□□□ 0.61
SNX17-206ENST00000484886 DDHD1Q8NEL9 900 aa18.89■□□□□ 0.61
SNX17-206ENST00000484886 ZCCHC14Q8WYQ9 949 aaKnown RBP18.89■□□□□ 0.61
SNX17-206ENST00000484886 MAGOHBQ96A72 148 aaKnown RBP18.89■□□□□ 0.61
SNX17-206ENST00000484886 GFM1Q96RP9 751 aaKnown RBP18.89■□□□□ 0.61
SNX17-206ENST00000484886 SNX12Q9UMY4 172 aa18.89■□□□□ 0.61
SNX17-206ENST00000484886 DNAJC16Q9Y2G8 782 aa18.89■□□□□ 0.61
SNX17-206ENST00000484886 SLC30A1Q9Y6M5 507 aa18.89■□□□□ 0.61
SNX17-206ENST00000484886 SPEGQ15772 3267 aa18.89■□□□□ 0.61
SNX17-206ENST00000484886 GOLGA6L10A0A0M3HER8 536 aa18.88■□□□□ 0.61
SNX17-206ENST00000484886 CHUKO15111 745 aa18.88■□□□□ 0.61
SNX17-206ENST00000484886 NUDT21O43809 227 aaKnown RBP18.88■□□□□ 0.61
SNX17-206ENST00000484886 SUN1O94901 812 aa18.88■□□□□ 0.61
SNX17-206ENST00000484886 PROS1P07225 676 aa18.88■□□□□ 0.61
SNX17-206ENST00000484886 ZNF7P17097 686 aaPredicted RBP18.88■□□□□ 0.61
SNX17-206ENST00000484886 VCLP18206 1134 aa18.88■□□□□ 0.61
SNX17-206ENST00000484886 VPS41P49754 854 aa18.88■□□□□ 0.61
SNX17-206ENST00000484886 TERF1P54274 439 aa18.88■□□□□ 0.61
SNX17-206ENST00000484886 CCL7P80098 99 aa18.88■□□□□ 0.61
SNX17-206ENST00000484886 NFATC2Q13469 925 aa18.88■□□□□ 0.61
SNX17-206ENST00000484886 CCDC38Q502W7 563 aa18.88■□□□□ 0.61
SNX17-206ENST00000484886 ZRANB3Q5FWF4 1079 aa18.88■□□□□ 0.61
SNX17-206ENST00000484886 CDCP2Q5VXM1 449 aa18.88■□□□□ 0.61
SNX17-206ENST00000484886 ULK4Q96C45 1275 aa18.88■□□□□ 0.61
SNX17-206ENST00000484886 NXPE2Q96DL1 559 aa18.88■□□□□ 0.61
SNX17-206ENST00000484886 TMEM121BQ9BXQ6 578 aaPredicted RBP18.88■□□□□ 0.61
SNX17-206ENST00000484886 FAM96AQ9H5X1 160 aa18.88■□□□□ 0.61
SNX17-206ENST00000484886 SMOXQ9NWM0 555 aa18.88■□□□□ 0.61
SNX17-206ENST00000484886 TBC1D29Q9UFV1 150 aa18.88■□□□□ 0.61
SNX17-206ENST00000484886 TTC7AQ9ULT0 858 aaPredicted RBP18.88■□□□□ 0.61
SNX17-206ENST00000484886 AKAP13Q12802 2813 aa18.88■□□□□ 0.61
SNX17-206ENST00000484886 TMEM8BA6NDV4 472 aa18.87■□□□□ 0.61
SNX17-206ENST00000484886 CASC3O15234 703 aaKnown RBP18.87■□□□□ 0.61
SNX17-206ENST00000484886 ZW10O43264 779 aa18.87■□□□□ 0.61
SNX17-206ENST00000484886 TCEA3O75764 348 aa18.87■□□□□ 0.61
SNX17-206ENST00000484886 SLC2A4P14672 509 aa18.87■□□□□ 0.61
SNX17-206ENST00000484886 ALDH4A1P30038 563 aa18.87■□□□□ 0.61
SNX17-206ENST00000484886 MC4RP32245 332 aa18.87■□□□□ 0.61
SNX17-206ENST00000484886 CA5AP35218 305 aa18.87■□□□□ 0.61
SNX17-206ENST00000484886 ST3GAL2Q16842 350 aa18.87■□□□□ 0.61
SNX17-206ENST00000484886 KCTD19Q17RG1 926 aaPredicted RBP18.87■□□□□ 0.61
SNX17-206ENST00000484886 AMZ1Q400G9 498 aa18.87■□□□□ 0.61
SNX17-206ENST00000484886 DET1Q7L5Y6 550 aa18.87■□□□□ 0.61
SNX17-206ENST00000484886 SPRED1Q7Z699 444 aa18.87■□□□□ 0.61
SNX17-206ENST00000484886 CACTIN-AS1Q8N1I8 211 aa18.87■□□□□ 0.61
SNX17-206ENST00000484886 DCUN1D1Q96GG9 259 aa18.87■□□□□ 0.61
SNX17-206ENST00000484886 ZMYND15Q9H091 742 aa18.87■□□□□ 0.61
SNX17-206ENST00000484886 LRRN3Q9H3W5 708 aa18.87■□□□□ 0.61
SNX17-206ENST00000484886 STN1Q9H668 368 aaKnown RBP18.87■□□□□ 0.61
SNX17-206ENST00000484886 CCDC86Q9H6F5 360 aaKnown RBP18.87■□□□□ 0.61
SNX17-206ENST00000484886 NLE1Q9NVX2 485 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms